; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0017721 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0017721
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr5:7723879..7725368
RNA-Seq ExpressionLag0017721
SyntenyLag0017721
Gene Ontology termsGO:0044260 - cellular macromolecule metabolic process (biological process)
GO:0090304 - nucleic acid metabolic process (biological process)
GO:0110165 - cellular anatomical structure (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAN75028.1 hypothetical protein VITISV_026823 [Vitis vinifera]2.0e-0527.78Show/hide
Query:  RIFIDRKSFSLWKSGC--GRKVIIEERKGKRVGRMELELGASNWVLDCLEAVAKSGNPRGFWRRRRLDSAVLLFQVLENERRRFGLLSLEFFRRRRSVLY
        RI +++K F +   G   G  V + ER    V  +  ++   +W+++ L+   +    RGF R+ R  +  LL ++  N R RF  ++    +R+  VL 
Subjt:  RIFIDRKSFSLWKSGC--GRKVIIEERKGKRVGRMELELGASNWVLDCLEAVAKSGNPRGFWRRRRLDSAVLLFQVLENERRRFGLLSLEFFRRRRSVLY

Query:  IPEGFKGKGWSRLAGELSSVLSGYSDSGKLITRDSHNVVQRKDS
        +PEG KGKGW  L   + SV   Y   G      + ++   +D+
Subjt:  IPEGFKGKGWSRLAGELSSVLSGYSDSGKLITRDSHNVVQRKDS

KAA0054521.1 transcription elongation factor B polypeptide 3 isoform X2 [Cucumis melo var. makuwa]3.6e-1035.26Show/hide
Query:  SGCGRKVIIEERKGKRVGRMELELGASNWVLDCLEAVAKSGNPRGFWRRRRLDSAVLLFQVLENERRRFGLLSLEFFRRRRSVLYIPEGFKGKGWSRLAG
        S CGRK+ IEER G+R  ++ELELG S WV DCL A A+  NP  FWRRR L++ VL                            IP+G  G G   LA 
Subjt:  SGCGRKVIIEERKGKRVGRMELELGASNWVLDCLEAVAKSGNPRGFWRRRRLDSAVLLFQVLENERRRFGLLSLEFFRRRRSVLYIPEGFKGKGWSRLAG

Query:  ELSSVLSGYSDS-GKLITRDSHNVVQRKDSVLTLEKKKDGKQKQYEEGDEKILDEEFDFAFECSSAVIIERFS
        E S  L G + S G L +    + V + D             K   EG  +    EFD   +C + VII+  S
Subjt:  ELSSVLSGYSDS-GKLITRDSHNVVQRKDSVLTLEKKKDGKQKQYEEGDEKILDEEFDFAFECSSAVIIERFS

KAE8648463.1 hypothetical protein Csa_023678, partial [Cucumis sativus]5.4e-0635.42Show/hide
Query:  IRETPEYSIHEWSFKKVAEGRRQAFSGGWVTALDIPPFLCSKSLISAVASMCGGVKANDEIEGDEVSIKEVRFEANGNSDGFIPVVSYLRHEGCFF
        I     + +  W F+ +   R+Q F GG V ALD+PPF  +K    ++ S CGG      I      +KEV F A    DGFI V   + H   FF
Subjt:  IRETPEYSIHEWSFKKVAEGRRQAFSGGWVTALDIPPFLCSKSLISAVASMCGGVKANDEIEGDEVSIKEVRFEANGNSDGFIPVVSYLRHEGCFF

TQD89700.1 hypothetical protein C1H46_024694 [Malus baccata]3.0e-1725.26Show/hide
Query:  IDRKSFSLWKSGCGRKVIIEERKGKRVGRMELELGASNWVLDCLEAVAKSGNPRGFWRRRRLDSAVLLFQVLENERRRFGLLSLEFFRRRRSVLYIPEGF
        I+ KSF       G ++ + ER   R  ++  +LG + W+++ L+AV  +G    F+R+ +  +     +  +N    F +LS          +++P+GF
Subjt:  IDRKSFSLWKSGCGRKVIIEERKGKRVGRMELELGASNWVLDCLEAVAKSGNPRGFWRRRRLDSAVLLFQVLENERRRFGLLSLEFFRRRRSVLYIPEGF

Query:  KGKGWSRLAGELSSVLSGYSDSG-KLITRDSHNVVQRKD--SVLTLEKKKD----GKQKQYEEGDEKILDE---EFDF--------AFECSSAVIIERFS
        KG GW  L   +  +L G   +G KL   +      R+D     T    +D    G+Q   EE + +  +E   EF +        ++   S V+ ER  
Subjt:  KGKGWSRLAGELSSVLSGYSDSG-KLITRDSHNVVQRKD--SVLTLEKKKD----GKQKQYEEGDEKILDE---EFDF--------AFECSSAVIIERFS

Query:  NKTPWFSIKDAIQKVYAEGWIFKPFCVNLAVGLCENKAAIKK--LLSEVTIRETPEYSIHEWSFKKVAEGRRQAFS-GGWVTALDIPPFLCSKSLISAVA
            W  ++ +++ +        PF  N A+ +C+N+   KK  LL  + ++E PE  +  W ++ +   +R A S GGWV    +PP L +K     + 
Subjt:  NKTPWFSIKDAIQKVYAEGWIFKPFCVNLAVGLCENKAAIKK--LLSEVTIRETPEYSIHEWSFKKVAEGRRQAFS-GGWVTALDIPPFLCSKSLISAVA

Query:  SMCGGVKANDEIEGDEVSIKEVRFEANGNSDGFIPVVSYLRHEGCFFPIRLVVDQQLEIERLKIDGDGSEKAEKVVLHLPKEAVVGGQRIQR
          CGG+   D+       + E + +   N  GFIP V  +      F +R  + Q    +R  I  +   + E  V  L KE     Q++QR
Subjt:  SMCGGVKANDEIEGDEVSIKEVRFEANGNSDGFIPVVSYLRHEGCFFPIRLVVDQQLEIERLKIDGDGSEKAEKVVLHLPKEAVVGGQRIQR

TYK14183.1 hypothetical protein E5676_scaffold8046G00070 [Cucumis melo var. makuwa]3.0e-3330.97Show/hide
Query:  MGRIFIDRKSFSLWKSGCGRKVIIEERKGKRVGRMELELGASNWVLDCLEAVAKSGNPRGFWRRRRLDSAVLLFQVLENERRRFGLLSLEFFRRRRSVLY
        MG++ IDRK F +      RK+ IEER G+  G++EL+ G S WV DCL   A + N   FW +RRL+ A++ FQVLENE+ RF +LSLE F+ R++ ++
Subjt:  MGRIFIDRKSFSLWKSGCGRKVIIEERKGKRVGRMELELGASNWVLDCLEAVAKSGNPRGFWRRRRLDSAVLLFQVLENERRRFGLLSLEFFRRRRSVLY

Query:  IPEGFKGKGWSRLAGELSSVLSGYSDSGKLITRDSHNVVQRKDSVLTLEKKKDGKQKQYEEGDEKILDEEFDFAFECSSAVIIERFSNKTPWFSIKDAIQ
        IPEG +G GW  LAGE+S++L  +S +    T       + +++   L K    +++  E G      ++ +FAFE  S VII++    + W ++K  ++
Subjt:  IPEGFKGKGWSRLAGELSSVLSGYSDSGKLITRDSHNVVQRKDSVLTLEKKKDGKQKQYEEGDEKILDEEFDFAFECSSAVIIERFSNKTPWFSIKDAIQ

Query:  KVYAEGWIFKPFCVNLAVGLCENKAAIKKLLSEVTIRETPEYSIHEWSFKKVAEGRRQAFSGGWVTALDIPPFLCSKSLISAVASMCGGVKANDEIEGDE
        +       FK FC NLAVG+  + +  K  L    +   PE  +                         +P               CGG    ++     
Subjt:  KVYAEGWIFKPFCVNLAVGLCENKAAIKKLLSEVTIRETPEYSIHEWSFKKVAEGRRQAFSGGWVTALDIPPFLCSKSLISAVASMCGGVKANDEIEGDE

Query:  VSIKEVRFEANGNSDGFIPVVSYLRHEGCFFPIRLVV--DQQLEIERLKIDG
          ++EV F+A GN DGF+     + ++   F  R  +   Q+ E++ L  DG
Subjt:  VSIKEVRFEANGNSDGFIPVVSYLRHEGCFFPIRLVV--DQQLEIERLKIDG

TrEMBL top hitse value%identityAlignment
A0A0A0KB99 Uncharacterized protein6.4e-1349.44Show/hide
Query:  MELELGASNWVLDCLEAVAKSGNPRGFWRRRRLDSAVLLFQVLENERRRFGLLSLEFFRRRRSVLYIPEGFKGKGWSRLAGELSSVLSG
        MEL+ G S  V DCL   A + NPR FW RR L  A++ FQVLEN R RF +LSLE F+ +++ ++I +G KGKG    A E+S +L G
Subjt:  MELELGASNWVLDCLEAVAKSGNPRGFWRRRRLDSAVLLFQVLENERRRFGLLSLEFFRRRRSVLYIPEGFKGKGWSRLAGELSSVLSG

A0A0A0KGZ5 Uncharacterized protein3.5e-1149.33Show/hide
Query:  RKSFSLWKSGCGRKVIIEERKGKRVGRMELELGASNWVLDCLEAVAKSGNPRGFWRRRRLDSAVLLFQVLENERR
        ++S+    + CGRK+ IEE  G+R G++ELELGAS WV+DCL A A+  NP GFW RR L+   + FQ     RR
Subjt:  RKSFSLWKSGCGRKVIIEERKGKRVGRMELELGASNWVLDCLEAVAKSGNPRGFWRRRRLDSAVLLFQVLENERR

A0A0A0LY03 Uncharacterized protein2.1e-1637.24Show/hide
Query:  GCGRKVIIEERKGKRVGRMELELGASNWVLDCLEAVAKSGNPRGFWRRRRLDSAVLLFQVLENERRRFGLLSLEFFRRRRSVLYIPEGFKGKGWSRLAGE
        G  RK+ IEER G++ G+++L+LG   WV D L A A +    G W+R++LD  ++ FQVLEN  RRF ++SL+ F+ R++ ++I EG +  GW  LA E
Subjt:  GCGRKVIIEERKGKRVGRMELELGASNWVLDCLEAVAKSGNPRGFWRRRRLDSAVLLFQVLENERRRFGLLSLEFFRRRRSVLYIPEGFKGKGWSRLAGE

Query:  L-----SSVLSGYSDSGKLITRDSHNVVQRKDSVLTLEKKKDGKQ
        +       +L+     G + T+ S N +Q      +  K+K+G Q
Subjt:  L-----SSVLSGYSDSGKLITRDSHNVVQRKDSVLTLEKKKDGKQ

A0A5A7ULV4 Transcription elongation factor B polypeptide 3 isoform X21.7e-1035.26Show/hide
Query:  SGCGRKVIIEERKGKRVGRMELELGASNWVLDCLEAVAKSGNPRGFWRRRRLDSAVLLFQVLENERRRFGLLSLEFFRRRRSVLYIPEGFKGKGWSRLAG
        S CGRK+ IEER G+R  ++ELELG S WV DCL A A+  NP  FWRRR L++ VL                            IP+G  G G   LA 
Subjt:  SGCGRKVIIEERKGKRVGRMELELGASNWVLDCLEAVAKSGNPRGFWRRRRLDSAVLLFQVLENERRRFGLLSLEFFRRRRSVLYIPEGFKGKGWSRLAG

Query:  ELSSVLSGYSDS-GKLITRDSHNVVQRKDSVLTLEKKKDGKQKQYEEGDEKILDEEFDFAFECSSAVIIERFS
        E S  L G + S G L +    + V + D             K   EG  +    EFD   +C + VII+  S
Subjt:  ELSSVLSGYSDS-GKLITRDSHNVVQRKDSVLTLEKKKDGKQKQYEEGDEKILDEEFDFAFECSSAVIIERFS

A0A5D3CQQ0 Uncharacterized protein1.5e-3330.97Show/hide
Query:  MGRIFIDRKSFSLWKSGCGRKVIIEERKGKRVGRMELELGASNWVLDCLEAVAKSGNPRGFWRRRRLDSAVLLFQVLENERRRFGLLSLEFFRRRRSVLY
        MG++ IDRK F +      RK+ IEER G+  G++EL+ G S WV DCL   A + N   FW +RRL+ A++ FQVLENE+ RF +LSLE F+ R++ ++
Subjt:  MGRIFIDRKSFSLWKSGCGRKVIIEERKGKRVGRMELELGASNWVLDCLEAVAKSGNPRGFWRRRRLDSAVLLFQVLENERRRFGLLSLEFFRRRRSVLY

Query:  IPEGFKGKGWSRLAGELSSVLSGYSDSGKLITRDSHNVVQRKDSVLTLEKKKDGKQKQYEEGDEKILDEEFDFAFECSSAVIIERFSNKTPWFSIKDAIQ
        IPEG +G GW  LAGE+S++L  +S +    T       + +++   L K    +++  E G      ++ +FAFE  S VII++    + W ++K  ++
Subjt:  IPEGFKGKGWSRLAGELSSVLSGYSDSGKLITRDSHNVVQRKDSVLTLEKKKDGKQKQYEEGDEKILDEEFDFAFECSSAVIIERFSNKTPWFSIKDAIQ

Query:  KVYAEGWIFKPFCVNLAVGLCENKAAIKKLLSEVTIRETPEYSIHEWSFKKVAEGRRQAFSGGWVTALDIPPFLCSKSLISAVASMCGGVKANDEIEGDE
        +       FK FC NLAVG+  + +  K  L    +   PE  +                         +P               CGG    ++     
Subjt:  KVYAEGWIFKPFCVNLAVGLCENKAAIKKLLSEVTIRETPEYSIHEWSFKKVAEGRRQAFSGGWVTALDIPPFLCSKSLISAVASMCGGVKANDEIEGDE

Query:  VSIKEVRFEANGNSDGFIPVVSYLRHEGCFFPIRLVV--DQQLEIERLKIDG
          ++EV F+A GN DGF+     + ++   F  R  +   Q+ E++ L  DG
Subjt:  VSIKEVRFEANGNSDGFIPVVSYLRHEGCFFPIRLVV--DQQLEIERLKIDG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G32080.1 purin-rich alpha 12.4e-0427.03Show/hide
Query:  FSLWKSGCGRKVIIEERKGKRVGRMELELGASNWVLDCLEAVAKSGNPRGFWRRRRLDSAVLLFQVLENERRRFGLLSLEFFRRRRSVLYIPEGFK-GKG
        F L ++  GR + I E+       + +     +W LD       S     F +  +LDS V  F + EN R RF  +S     R RS + +P G    +G
Subjt:  FSLWKSGCGRKVIIEERKGKRVGRMELELGASNWVLDCLEAVAKSGNPRGFWRRRRLDSAVLLFQVLENERRRFGLLSLEFFRRRRSVLYIPEGFK-GKG

Query:  WSRLAGELSSV
        W+     L+ +
Subjt:  WSRLAGELSSV

AT2G32080.2 purin-rich alpha 12.4e-0427.03Show/hide
Query:  FSLWKSGCGRKVIIEERKGKRVGRMELELGASNWVLDCLEAVAKSGNPRGFWRRRRLDSAVLLFQVLENERRRFGLLSLEFFRRRRSVLYIPEGFK-GKG
        F L ++  GR + I E+       + +     +W LD       S     F +  +LDS V  F + EN R RF  +S     R RS + +P G    +G
Subjt:  FSLWKSGCGRKVIIEERKGKRVGRMELELGASNWVLDCLEAVAKSGNPRGFWRRRRLDSAVLLFQVLENERRRFGLLSLEFFRRRRSVLYIPEGFK-GKG

Query:  WSRLAGELSSV
        W+     L+ +
Subjt:  WSRLAGELSSV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGAGGATTTTCATCGATAGGAAATCGTTTTCTCTATGGAAGAGCGGATGCGGAAGGAAGGTAATAATAGAAGAGAGAAAAGGTAAGAGAGTGGGGAGAATGGAGCT
CGAGTTAGGTGCTTCTAATTGGGTCCTTGACTGCCTAGAGGCTGTGGCGAAATCTGGGAACCCCCGTGGCTTCTGGAGAAGGAGGAGATTGGACTCTGCTGTGTTACTCT
TCCAAGTTTTAGAAAATGAAAGACGAAGGTTTGGGCTTTTGTCTTTGGAATTTTTTAGAAGAAGAAGGTCGGTGTTATATATTCCAGAAGGTTTTAAAGGGAAGGGATGG
AGTCGGTTAGCAGGGGAATTATCATCGGTGTTATCCGGATACAGTGATTCAGGGAAGCTGATAACGAGGGATTCCCATAATGTCGTCCAAAGGAAAGATTCAGTCCTTAC
TCTAGAAAAGAAGAAGGATGGGAAGCAAAAACAATATGAAGAGGGAGATGAGAAAATACTAGATGAGGAGTTCGACTTCGCTTTTGAGTGTTCGTCGGCTGTCATCATCG
AGAGATTCAGTAATAAAACACCCTGGTTTTCCATCAAGGATGCCATTCAGAAGGTTTATGCCGAAGGATGGATATTCAAGCCGTTTTGTGTGAATCTTGCAGTGGGTCTA
TGCGAAAACAAGGCAGCTATCAAGAAATTGTTATCGGAGGTCACGATCAGAGAAACCCCAGAATACTCCATCCATGAGTGGAGCTTCAAAAAGGTGGCGGAGGGTCGACG
ACAAGCCTTCTCTGGGGGGTGGGTCACAGCCCTTGATATTCCGCCATTTCTTTGCTCTAAAAGTTTGATTTCTGCAGTAGCGAGCATGTGTGGAGGAGTCAAAGCTAACG
ACGAGATAGAAGGAGACGAGGTTTCGATTAAAGAAGTTCGTTTTGAGGCAAATGGAAACTCGGACGGCTTTATTCCGGTGGTCAGCTACCTTCGCCATGAGGGATGTTTT
TTCCCGATTAGGTTGGTCGTCGATCAGCAGCTGGAAATTGAGAGGTTGAAGATTGATGGAGATGGGTCTGAAAAAGCTGAGAAAGTCGTCCTTCACCTGCCAAAGGAAGC
AGTTGTAGGGGGTCAGAGGATTCAGAGGAATAGGGATCACGTGAGGATAATGGGGAAAGGGCCTAAGGGATCCGTCAAGTTCAGATTTGGAGGCGGTGCAGGCAATAAGG
TTGGGCCTTCGGGCCTGAAGGCAGTTAATCCTATCAGCGTTACTCAAAGTTATCAGCCCAGCAAAGATAAGGAATCAGACCAAGGCCAATCGTCGCGAGTTGGCATTCCA
GCGGCGCAGGTTTGCAAGGATCGGGCTGATCCGGATTCTTTAACGGCCAGACGAATACAGTCGAAGATGAAAAACAGCTAG
mRNA sequenceShow/hide mRNA sequence
ATGGGGAGGATTTTCATCGATAGGAAATCGTTTTCTCTATGGAAGAGCGGATGCGGAAGGAAGGTAATAATAGAAGAGAGAAAAGGTAAGAGAGTGGGGAGAATGGAGCT
CGAGTTAGGTGCTTCTAATTGGGTCCTTGACTGCCTAGAGGCTGTGGCGAAATCTGGGAACCCCCGTGGCTTCTGGAGAAGGAGGAGATTGGACTCTGCTGTGTTACTCT
TCCAAGTTTTAGAAAATGAAAGACGAAGGTTTGGGCTTTTGTCTTTGGAATTTTTTAGAAGAAGAAGGTCGGTGTTATATATTCCAGAAGGTTTTAAAGGGAAGGGATGG
AGTCGGTTAGCAGGGGAATTATCATCGGTGTTATCCGGATACAGTGATTCAGGGAAGCTGATAACGAGGGATTCCCATAATGTCGTCCAAAGGAAAGATTCAGTCCTTAC
TCTAGAAAAGAAGAAGGATGGGAAGCAAAAACAATATGAAGAGGGAGATGAGAAAATACTAGATGAGGAGTTCGACTTCGCTTTTGAGTGTTCGTCGGCTGTCATCATCG
AGAGATTCAGTAATAAAACACCCTGGTTTTCCATCAAGGATGCCATTCAGAAGGTTTATGCCGAAGGATGGATATTCAAGCCGTTTTGTGTGAATCTTGCAGTGGGTCTA
TGCGAAAACAAGGCAGCTATCAAGAAATTGTTATCGGAGGTCACGATCAGAGAAACCCCAGAATACTCCATCCATGAGTGGAGCTTCAAAAAGGTGGCGGAGGGTCGACG
ACAAGCCTTCTCTGGGGGGTGGGTCACAGCCCTTGATATTCCGCCATTTCTTTGCTCTAAAAGTTTGATTTCTGCAGTAGCGAGCATGTGTGGAGGAGTCAAAGCTAACG
ACGAGATAGAAGGAGACGAGGTTTCGATTAAAGAAGTTCGTTTTGAGGCAAATGGAAACTCGGACGGCTTTATTCCGGTGGTCAGCTACCTTCGCCATGAGGGATGTTTT
TTCCCGATTAGGTTGGTCGTCGATCAGCAGCTGGAAATTGAGAGGTTGAAGATTGATGGAGATGGGTCTGAAAAAGCTGAGAAAGTCGTCCTTCACCTGCCAAAGGAAGC
AGTTGTAGGGGGTCAGAGGATTCAGAGGAATAGGGATCACGTGAGGATAATGGGGAAAGGGCCTAAGGGATCCGTCAAGTTCAGATTTGGAGGCGGTGCAGGCAATAAGG
TTGGGCCTTCGGGCCTGAAGGCAGTTAATCCTATCAGCGTTACTCAAAGTTATCAGCCCAGCAAAGATAAGGAATCAGACCAAGGCCAATCGTCGCGAGTTGGCATTCCA
GCGGCGCAGGTTTGCAAGGATCGGGCTGATCCGGATTCTTTAACGGCCAGACGAATACAGTCGAAGATGAAAAACAGCTAG
Protein sequenceShow/hide protein sequence
MGRIFIDRKSFSLWKSGCGRKVIIEERKGKRVGRMELELGASNWVLDCLEAVAKSGNPRGFWRRRRLDSAVLLFQVLENERRRFGLLSLEFFRRRRSVLYIPEGFKGKGW
SRLAGELSSVLSGYSDSGKLITRDSHNVVQRKDSVLTLEKKKDGKQKQYEEGDEKILDEEFDFAFECSSAVIIERFSNKTPWFSIKDAIQKVYAEGWIFKPFCVNLAVGL
CENKAAIKKLLSEVTIRETPEYSIHEWSFKKVAEGRRQAFSGGWVTALDIPPFLCSKSLISAVASMCGGVKANDEIEGDEVSIKEVRFEANGNSDGFIPVVSYLRHEGCF
FPIRLVVDQQLEIERLKIDGDGSEKAEKVVLHLPKEAVVGGQRIQRNRDHVRIMGKGPKGSVKFRFGGGAGNKVGPSGLKAVNPISVTQSYQPSKDKESDQGQSSRVGIP
AAQVCKDRADPDSLTARRIQSKMKNS