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Lag0017742 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0017742
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionIntegrase catalytic domain-containing protein
Genome locationchr5:8100054..8100680
RNA-Seq ExpressionLag0017742
SyntenyLag0017742
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF4375842.1 hypothetical protein G4B88_026421 [Cannabis sativa]2.1e-1031.37Show/hide
Query:  MPTTHDSTISVERVMLLYCIMKGLEINIESIIREEILACGRKRERKLFFGSLITQFCQRVKIVPGKDEEHHFLKPTIDLSLIGKLQQNRIQRKDKASTSQ
        +PT+HDST+S ER+ +LYCI+KG +IN+  +I +EI  C  + + KLFF  LIT+ C+   +    DE+                    + RK   S   
Subjt:  MPTTHDSTISVERVMLLYCIMKGLEINIESIIREEILACGRKRERKLFFGSLITQFCQRVKIVPGKDEEHHFLKPTIDLSLIGKLQQNRIQRKDKASTSQ

Query:  VTPPLRSNMVSPSQHTPFSGPSPSFEALAIAYRQLDQIRDNMMTYWAYAKEKD
           P R+   +PS  T  +   P  E L+       Q+ + + T+W Y +E+D
Subjt:  VTPPLRSNMVSPSQHTPFSGPSPSFEALAIAYRQLDQIRDNMMTYWAYAKEKD

MCI09484.1 hypothetical protein [Trifolium medium]4.0e-0932.45Show/hide
Query:  MPTTHDSTISVERVMLLYCIMKGLEINIESIIREEILACGRKR--ERKLFFGSLITQFCQRVKI-VPGKDEEHHFLKPTIDLSLIGKLQQNRIQRKDKAS
        MPTTH+ T++  R++LL+CI+ G +IN+  II +EI+ C  K+  E  L+F  LIT+ C++  + V G+DE     +PT          Q  I+   K +
Subjt:  MPTTHDSTISVERVMLLYCIMKGLEINIESIIREEILACGRKR--ERKLFFGSLITQFCQRVKI-VPGKDEEHHFLKPTIDLSLIGKLQQNRIQRKDKAS

Query:  TSQVTPPLRSNMVSPSQHTPFSGPSPSFEALAIAYRQLDQIRDNMMTYWAY
        T +           P Q  P +  S +  + A+   +  + R NM TYWA+
Subjt:  TSQVTPPLRSNMVSPSQHTPFSGPSPSFEALAIAYRQLDQIRDNMMTYWAY

PON46472.1 hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii]1.6e-1028.64Show/hide
Query:  MPTTHDSTISVERVMLLYCIMKGLEINIESIIREEILACGRKRERKLFFGSLITQFCQRVKIVPGKDEEHHFLKPTIDLSLIGKLQQNRIQRKDKASTSQ
        +PTTH  T+S +R++LL+ ++ G  IN+  +I  EI AC  ++   LFF SLIT+ C+  +     +EE       ID   + ++ Q       +  T  
Subjt:  MPTTHDSTISVERVMLLYCIMKGLEINIESIIREEILACGRKRERKLFFGSLITQFCQRVKIVPGKDEEHHFLKPTIDLSLIGKLQQNRIQRKDKASTSQ

Query:  VTPPLRSNMVSPSQHTPFSGPSPSFEALAIAYRQLDQIRDNMMT-----------YWAYAKEKDEAIREFYLSIAPSTAPIFPNFPQSLLPQEDKDFDDE
           P  S   + S +          +AL     Q +  + +MM+           +WAY+KE+D A+++   +      P FP FPQ +L  +D D++ E
Subjt:  VTPPLRSNMVSPSQHTPFSGPSPSFEALAIAYRQLDQIRDNMMT-----------YWAYAKEKDEAIREFYLSIAPSTAPIFPNFPQSLLPQEDKDFDDE

Query:  EEKNDDGEDEEKE
         E + DG +E  E
Subjt:  EEKNDDGEDEEKE

PON59596.1 hypothetical protein PanWU01x14_158080 [Parasponia andersonii]1.7e-1229.38Show/hide
Query:  MPTTHDSTISVERVMLLYCIMKGLEINIESIIREEILACGRKRERKLFFGSLITQFCQRVKIVPGKDEEHHFLKPTIDLSLIGKL---------QQNRIQ
        +PTTH  T+S +R++LLY ++ G  IN+  +I  EI AC  ++   LFF SLITQ C+  +     +EE   +   ID   + ++         QQ    
Subjt:  MPTTHDSTISVERVMLLYCIMKGLEINIESIIREEILACGRKRERKLFFGSLITQFCQRVKIVPGKDEEHHFLKPTIDLSLIGKL---------QQNRIQ

Query:  RKDKASTSQVTPPLRSNMVSPSQHTPFSGPSPSFEALAIAYRQLDQIRDNMMTYWAYAKEKDEAIREFYLSIAPSTAPIFPNFPQSLLPQEDKDFDDEEE
        R   AS+S+    +   + +  Q          +  +++    L         +WAY+KE+D A+++   +      P FP FPQ LL  +D D++ E E
Subjt:  RKDKASTSQVTPPLRSNMVSPSQHTPFSGPSPSFEALAIAYRQLDQIRDNMMTYWAYAKEKDEAIREFYLSIAPSTAPIFPNFPQSLLPQEDKDFDDEEE

Query:  KNDDGEDEEKE
         + DG +E  E
Subjt:  KNDDGEDEEKE

PON78020.1 hypothetical protein PanWU01x14_023740 [Parasponia andersonii]5.0e-1228.22Show/hide
Query:  MPTTHDSTISVERVMLLYCIMKGLEINIESIIREEILACGRKRERKLFFGSLITQFCQRVKIVPGKDEEHHFLKPTIDLSLIGKLQQNRIQRKDKASTSQ
        +PTTH   +S +R++LL+ ++ G  IN+  +I  EI AC  ++   LFF SLIT+ C+    +  +++ H+     ID   + ++ Q       +  T  
Subjt:  MPTTHDSTISVERVMLLYCIMKGLEINIESIIREEILACGRKRERKLFFGSLITQFCQRVKIVPGKDEEHHFLKPTIDLSLIGKLQQNRIQRKDKASTSQ

Query:  VTPPLRSNMVSPSQHTPFSGPSPSFEALAIAYRQLDQIRDNMMTYWAYAKEKDEAIREFYLSIAPSTAPIFPNFPQSLLPQEDKDFDDEEEKNDDGEDEE
           P  S   + S            +AL     Q +        +WAY+KE+D A+++   +      P FP FPQ +L  +D D++ E E + DG +E 
Subjt:  VTPPLRSNMVSPSQHTPFSGPSPSFEALAIAYRQLDQIRDNMMTYWAYAKEKDEAIREFYLSIAPSTAPIFPNFPQSLLPQEDKDFDDEEEKNDDGEDEE

Query:  KE
         E
Subjt:  KE

TrEMBL top hitse value%identityAlignment
A0A2P5BCG4 Uncharacterized protein (Fragment)7.8e-1128.64Show/hide
Query:  MPTTHDSTISVERVMLLYCIMKGLEINIESIIREEILACGRKRERKLFFGSLITQFCQRVKIVPGKDEEHHFLKPTIDLSLIGKLQQNRIQRKDKASTSQ
        +PTTH  T+S +R++LL+ ++ G  IN+  +I  EI AC  ++   LFF SLIT+ C+  +     +EE       ID   + ++ Q       +  T  
Subjt:  MPTTHDSTISVERVMLLYCIMKGLEINIESIIREEILACGRKRERKLFFGSLITQFCQRVKIVPGKDEEHHFLKPTIDLSLIGKLQQNRIQRKDKASTSQ

Query:  VTPPLRSNMVSPSQHTPFSGPSPSFEALAIAYRQLDQIRDNMMT-----------YWAYAKEKDEAIREFYLSIAPSTAPIFPNFPQSLLPQEDKDFDDE
           P  S   + S +          +AL     Q +  + +MM+           +WAY+KE+D A+++   +      P FP FPQ +L  +D D++ E
Subjt:  VTPPLRSNMVSPSQHTPFSGPSPSFEALAIAYRQLDQIRDNMMT-----------YWAYAKEKDEAIREFYLSIAPSTAPIFPNFPQSLLPQEDKDFDDE

Query:  EEKNDDGEDEEKE
         E + DG +E  E
Subjt:  EEKNDDGEDEEKE

A0A2P5CEY2 Uncharacterized protein8.3e-1329.38Show/hide
Query:  MPTTHDSTISVERVMLLYCIMKGLEINIESIIREEILACGRKRERKLFFGSLITQFCQRVKIVPGKDEEHHFLKPTIDLSLIGKL---------QQNRIQ
        +PTTH  T+S +R++LLY ++ G  IN+  +I  EI AC  ++   LFF SLITQ C+  +     +EE   +   ID   + ++         QQ    
Subjt:  MPTTHDSTISVERVMLLYCIMKGLEINIESIIREEILACGRKRERKLFFGSLITQFCQRVKIVPGKDEEHHFLKPTIDLSLIGKL---------QQNRIQ

Query:  RKDKASTSQVTPPLRSNMVSPSQHTPFSGPSPSFEALAIAYRQLDQIRDNMMTYWAYAKEKDEAIREFYLSIAPSTAPIFPNFPQSLLPQEDKDFDDEEE
        R   AS+S+    +   + +  Q          +  +++    L         +WAY+KE+D A+++   +      P FP FPQ LL  +D D++ E E
Subjt:  RKDKASTSQVTPPLRSNMVSPSQHTPFSGPSPSFEALAIAYRQLDQIRDNMMTYWAYAKEKDEAIREFYLSIAPSTAPIFPNFPQSLLPQEDKDFDDEEE

Query:  KNDDGEDEEKE
         + DG +E  E
Subjt:  KNDDGEDEEKE

A0A2P5DXM3 Uncharacterized protein2.4e-1228.22Show/hide
Query:  MPTTHDSTISVERVMLLYCIMKGLEINIESIIREEILACGRKRERKLFFGSLITQFCQRVKIVPGKDEEHHFLKPTIDLSLIGKLQQNRIQRKDKASTSQ
        +PTTH   +S +R++LL+ ++ G  IN+  +I  EI AC  ++   LFF SLIT+ C+    +  +++ H+     ID   + ++ Q       +  T  
Subjt:  MPTTHDSTISVERVMLLYCIMKGLEINIESIIREEILACGRKRERKLFFGSLITQFCQRVKIVPGKDEEHHFLKPTIDLSLIGKLQQNRIQRKDKASTSQ

Query:  VTPPLRSNMVSPSQHTPFSGPSPSFEALAIAYRQLDQIRDNMMTYWAYAKEKDEAIREFYLSIAPSTAPIFPNFPQSLLPQEDKDFDDEEEKNDDGEDEE
           P  S   + S            +AL     Q +        +WAY+KE+D A+++   +      P FP FPQ +L  +D D++ E E + DG +E 
Subjt:  VTPPLRSNMVSPSQHTPFSGPSPSFEALAIAYRQLDQIRDNMMTYWAYAKEKDEAIREFYLSIAPSTAPIFPNFPQSLLPQEDKDFDDEEEKNDDGEDEE

Query:  KE
         E
Subjt:  KE

A0A392PCH7 Uncharacterized protein1.9e-0932.45Show/hide
Query:  MPTTHDSTISVERVMLLYCIMKGLEINIESIIREEILACGRKR--ERKLFFGSLITQFCQRVKI-VPGKDEEHHFLKPTIDLSLIGKLQQNRIQRKDKAS
        MPTTH+ T++  R++LL+CI+ G +IN+  II +EI+ C  K+  E  L+F  LIT+ C++  + V G+DE     +PT          Q  I+   K +
Subjt:  MPTTHDSTISVERVMLLYCIMKGLEINIESIIREEILACGRKR--ERKLFFGSLITQFCQRVKI-VPGKDEEHHFLKPTIDLSLIGKLQQNRIQRKDKAS

Query:  TSQVTPPLRSNMVSPSQHTPFSGPSPSFEALAIAYRQLDQIRDNMMTYWAY
        T +           P Q  P +  S +  + A+   +  + R NM TYWA+
Subjt:  TSQVTPPLRSNMVSPSQHTPFSGPSPSFEALAIAYRQLDQIRDNMMTYWAY

A0A7J6FZ22 Uncharacterized protein1.0e-1031.37Show/hide
Query:  MPTTHDSTISVERVMLLYCIMKGLEINIESIIREEILACGRKRERKLFFGSLITQFCQRVKIVPGKDEEHHFLKPTIDLSLIGKLQQNRIQRKDKASTSQ
        +PT+HDST+S ER+ +LYCI+KG +IN+  +I +EI  C  + + KLFF  LIT+ C+   +    DE+                    + RK   S   
Subjt:  MPTTHDSTISVERVMLLYCIMKGLEINIESIIREEILACGRKRERKLFFGSLITQFCQRVKIVPGKDEEHHFLKPTIDLSLIGKLQQNRIQRKDKASTSQ

Query:  VTPPLRSNMVSPSQHTPFSGPSPSFEALAIAYRQLDQIRDNMMTYWAYAKEKD
           P R+   +PS  T  +   P  E L+       Q+ + + T+W Y +E+D
Subjt:  VTPPLRSNMVSPSQHTPFSGPSPSFEALAIAYRQLDQIRDNMMTYWAYAKEKD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCGACCACCCACGATAGCACCATCTCCGTAGAAAGAGTCATGCTCCTCTACTGTATTATGAAGGGGTTGGAAATCAACATCGAGAGCATTATCAGGGAGGAGATTCT
CGCCTGTGGAAGGAAAAGAGAGAGAAAACTTTTCTTTGGATCGCTTATCACCCAGTTTTGCCAAAGGGTGAAGATAGTTCCTGGCAAGGATGAGGAGCATCACTTCTTGA
AGCCAACCATTGACCTATCTTTGATTGGGAAGCTTCAACAGAATAGAATCCAAAGGAAAGATAAAGCCTCCACATCTCAGGTCACTCCACCATTAAGGTCGAACATGGTT
TCTCCATCCCAGCACACTCCTTTCTCAGGGCCCTCACCATCATTTGAAGCCCTGGCAATTGCCTACCGACAGCTAGATCAAATCAGGGACAACATGATGACTTATTGGGC
ATATGCAAAGGAGAAAGATGAAGCCATTAGAGAGTTTTATCTCTCTATCGCCCCGAGTACTGCTCCGATCTTTCCCAATTTCCCTCAATCGCTGCTGCCTCAAGAAGACA
AGGATTTTGATGATGAAGAAGAAAAAAATGATGATGGAGAAGATGAAGAGAAAGAGAGTTCCTCGGATGAGGACTAG
mRNA sequenceShow/hide mRNA sequence
ATGCCGACCACCCACGATAGCACCATCTCCGTAGAAAGAGTCATGCTCCTCTACTGTATTATGAAGGGGTTGGAAATCAACATCGAGAGCATTATCAGGGAGGAGATTCT
CGCCTGTGGAAGGAAAAGAGAGAGAAAACTTTTCTTTGGATCGCTTATCACCCAGTTTTGCCAAAGGGTGAAGATAGTTCCTGGCAAGGATGAGGAGCATCACTTCTTGA
AGCCAACCATTGACCTATCTTTGATTGGGAAGCTTCAACAGAATAGAATCCAAAGGAAAGATAAAGCCTCCACATCTCAGGTCACTCCACCATTAAGGTCGAACATGGTT
TCTCCATCCCAGCACACTCCTTTCTCAGGGCCCTCACCATCATTTGAAGCCCTGGCAATTGCCTACCGACAGCTAGATCAAATCAGGGACAACATGATGACTTATTGGGC
ATATGCAAAGGAGAAAGATGAAGCCATTAGAGAGTTTTATCTCTCTATCGCCCCGAGTACTGCTCCGATCTTTCCCAATTTCCCTCAATCGCTGCTGCCTCAAGAAGACA
AGGATTTTGATGATGAAGAAGAAAAAAATGATGATGGAGAAGATGAAGAGAAAGAGAGTTCCTCGGATGAGGACTAG
Protein sequenceShow/hide protein sequence
MPTTHDSTISVERVMLLYCIMKGLEINIESIIREEILACGRKRERKLFFGSLITQFCQRVKIVPGKDEEHHFLKPTIDLSLIGKLQQNRIQRKDKASTSQVTPPLRSNMV
SPSQHTPFSGPSPSFEALAIAYRQLDQIRDNMMTYWAYAKEKDEAIREFYLSIAPSTAPIFPNFPQSLLPQEDKDFDDEEEKNDDGEDEEKESSSDED