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Lag0017744 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0017744
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr5:8126137..8128847
RNA-Seq ExpressionLag0017744
SyntenyLag0017744
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_015382878.1 uncharacterized protein LOC107175701 [Citrus sinensis]4.2e-1537.59Show/hide
Query:  FTNHEKDRRAKHKI------------LRSRETWLRSGNRNTKWFHSKASQRRRKNNI-GVFDSKGKWESEGDKIEKVAAEYFKRLFKSSNPRAAQIEKIT
        F N E+ +R +++I             RSR  WL+ G+RN K+FH+KAS +++KN I G+ D  GKW  E +K+E++  +YF  +F ++NP  +Q+    
Subjt:  FTNHEKDRRAKHKI------------LRSRETWLRSGNRNTKWFHSKASQRRRKNNI-GVFDSKGKWESEGDKIEKVAAEYFKRLFKSSNPRAAQIEKIT

Query:  SCVSTSLSDQQRRSLDQPYTKQEVEAALKSMNP
          V   L++  R+ +DQP+T +EVE AL  M P
Subjt:  SCVSTSLSDQQRRSLDQPYTKQEVEAALKSMNP

XP_023878301.1 uncharacterized protein LOC111990748 [Quercus suber]7.1e-1531.63Show/hide
Query:  VVPDQWSSEVFLST-DGVVELCTHCPTRGSQWSSEVFLSTDGVVELCTHCPTRSKDFKTLKLSLKTLSFAPSTIGGEDLQGSMEIRRPILAKISFTNHEK
        ++   W   V LST +G+ E    C    S+WSS ++             P + +D ++    L TL+        EDL  S+EI R +  +I   N   
Subjt:  VVPDQWSSEVFLST-DGVVELCTHCPTRGSQWSSEVFLSTDGVVELCTHCPTRSKDFKTLKLSLKTLSFAPSTIGGEDLQGSMEIRRPILAKISFTNHEK

Query:  DRRAKHKILRSRETWLRSGNRNTKWFHSKASQRRRKNNI-GVFDSKGKWESEGDKIEKVAAEYFKRLFKSSNPRAAQIEKITSCVSTSLSDQQRRSLDQP
        D    +   R++  WL+ G+RNTK+FH++AS+RR++N I G++D +G+W    + I + A  YF  ++ SS+P  +QIE++T  +   ++++   SL + 
Subjt:  DRRAKHKILRSRETWLRSGNRNTKWFHSKASQRRRKNNI-GVFDSKGKWESEGDKIEKVAAEYFKRLFKSSNPRAAQIEKITSCVSTSLSDQQRRSLDQP

Query:  YTKQEVEAALKSMNP
        +TK+EV  ALK ++P
Subjt:  YTKQEVEAALKSMNP

XP_030923509.1 uncharacterized protein LOC115950456 [Quercus lobata]4.2e-1529.49Show/hide
Query:  RDVVPDQW-SSEVFLSTDGVVELCTHCPTRGSQWSSEVFLSTDGVVELCTHCPTRSKDFKTLKLSLKTLSFAPSTIGGEDLQGSMEIRRPILAKISFTNH
        +D++   W  S+   S  G+     +C    S+W+  VF    G +             K +K   +TL++  S      L G +   R  + ++  +  
Subjt:  RDVVPDQW-SSEVFLSTDGVVELCTHCPTRGSQWSSEVFLSTDGVVELCTHCPTRSKDFKTLKLSLKTLSFAPSTIGGEDLQGSMEIRRPILAKISFTNH

Query:  EKDRRAKHKILRSRETWLRSGNRNTKWFHSKASQRRRKNNIG-VFDSKGKWESEGDKIEKVAAEYFKRLFKSSNPRAAQIEKITSCVSTSLSDQQRRSLD
         K ++      RS+  WL  G+RNTK+FHSKAS RRRKN I  + D  G W    D I +VA  YFK L+ ++ P   +I ++   + T +S++  ++L 
Subjt:  EKDRRAKHKILRSRETWLRSGNRNTKWFHSKASQRRRKNNIG-VFDSKGKWESEGDKIEKVAAEYFKRLFKSSNPRAAQIEKITSCVSTSLSDQQRRSLD

Query:  QPYTKQEVEAALKSMNP
        + +T++E+E AL  M+P
Subjt:  QPYTKQEVEAALKSMNP

XP_030970416.1 uncharacterized protein LOC115990765 [Quercus lobata]7.1e-1529.49Show/hide
Query:  RDVVPDQW-SSEVFLSTDGVVELCTHCPTRGSQWSSEVFLSTDGVVELCTHCPTRSKDFKTLKLSLKTLSFAPSTIGGEDLQGSMEIRRPILAKISFTNH
        +D++   W  S+   S  G+     +C    S+W+  VF    G +             K +K   +TL++  S      L G +   R  + ++  +  
Subjt:  RDVVPDQW-SSEVFLSTDGVVELCTHCPTRGSQWSSEVFLSTDGVVELCTHCPTRSKDFKTLKLSLKTLSFAPSTIGGEDLQGSMEIRRPILAKISFTNH

Query:  EKDRRAKHKILRSRETWLRSGNRNTKWFHSKASQRRRKNNIG-VFDSKGKWESEGDKIEKVAAEYFKRLFKSSNPRAAQIEKITSCVSTSLSDQQRRSLD
         K ++      RS+  WL  G+RNTK+FHSKAS RRRKN I  + D  G W    D I +VA  YFK L+ ++ P   +I ++   + T +S+   ++L 
Subjt:  EKDRRAKHKILRSRETWLRSGNRNTKWFHSKASQRRRKNNIG-VFDSKGKWESEGDKIEKVAAEYFKRLFKSSNPRAAQIEKITSCVSTSLSDQQRRSLD

Query:  QPYTKQEVEAALKSMNP
        + +T++E+E AL  M+P
Subjt:  QPYTKQEVEAALKSMNP

XP_030970552.1 uncharacterized protein LOC115990926 [Quercus lobata]7.1e-1529.49Show/hide
Query:  RDVVPDQW-SSEVFLSTDGVVELCTHCPTRGSQWSSEVFLSTDGVVELCTHCPTRSKDFKTLKLSLKTLSFAPSTIGGEDLQGSMEIRRPILAKISFTNH
        +D++   W  S+   S  G+     +C    S+W+  VF    G +             K +K   +TL++  S      L G +   R  + ++  +  
Subjt:  RDVVPDQW-SSEVFLSTDGVVELCTHCPTRGSQWSSEVFLSTDGVVELCTHCPTRSKDFKTLKLSLKTLSFAPSTIGGEDLQGSMEIRRPILAKISFTNH

Query:  EKDRRAKHKILRSRETWLRSGNRNTKWFHSKASQRRRKNNIG-VFDSKGKWESEGDKIEKVAAEYFKRLFKSSNPRAAQIEKITSCVSTSLSDQQRRSLD
         K ++      RS+  WL  G+RNTK+FHSKAS RRRKN I  + D  G W    D I +VA  YFK L+ ++ P   +I ++   + T +S+   ++L 
Subjt:  EKDRRAKHKILRSRETWLRSGNRNTKWFHSKASQRRRKNNIG-VFDSKGKWESEGDKIEKVAAEYFKRLFKSSNPRAAQIEKITSCVSTSLSDQQRRSLD

Query:  QPYTKQEVEAALKSMNP
        + +T++E+E AL  M+P
Subjt:  QPYTKQEVEAALKSMNP

TrEMBL top hitse value%identityAlignment
A0A2N9H361 Reverse transcriptase domain-containing protein1.7e-1442.06Show/hide
Query:  RSRETWLRSGNRNTKWFHSKASQRRRKNNI-GVFDSKGKWESEGDKIEKVAAEYFKRLFKSSNPRAAQIEKITSCVSTSLSDQQRRSLDQPYTKQEVEAA
        RSR TWL  G+RNT++FHS+ASQR+R+N I G+ D  G+W  + DK+ ++A +YF+ +FK++ P   +I+++T  +   +     ++L Q YT +EVE A
Subjt:  RSRETWLRSGNRNTKWFHSKASQRRRKNNI-GVFDSKGKWESEGDKIEKVAAEYFKRLFKSSNPRAAQIEKITSCVSTSLSDQQRRSLDQPYTKQEVEAA

Query:  LKSMNPV
        +K M P+
Subjt:  LKSMNPV

A0A2N9I921 Reverse transcriptase domain-containing protein1.4e-1631.67Show/hide
Query:  VVELCTHCPTRSKD-----FKTLKLSLKTLSFAPSTIGGEDLQG-SMEIRRPILAKISFTNHEKDRRAKHKILRSRETWLRSGNRNTKWFHSKASQRRRK
        V+    HC  + K+     F +++  L+           + +QG S ++   + A++S    +++R  +    RSR  WL+ G+RNT +FH++A+ R+R+
Subjt:  VVELCTHCPTRSKD-----FKTLKLSLKTLSFAPSTIGGEDLQG-SMEIRRPILAKISFTNHEKDRRAKHKILRSRETWLRSGNRNTKWFHSKASQRRRK

Query:  NNI-GVFDSKGKWESEGDKIEKVAAEYFKRLFKSSNPRAAQIEKITSCVSTSLSDQQRRSLDQPYTKQEVEAALKSMNPV
        N+I G+ DS G+W+++ D+++ +   YF+ +F SSNP  + I+ +  C+ T +SD    +L +PYT  EVE AL+ M P+
Subjt:  NNI-GVFDSKGKWESEGDKIEKVAAEYFKRLFKSSNPRAAQIEKITSCVSTSLSDQQRRSLDQPYTKQEVEAALKSMNPV

A0A7N2M6Y1 CCHC-type domain-containing protein3.4e-1529.49Show/hide
Query:  RDVVPDQW-SSEVFLSTDGVVELCTHCPTRGSQWSSEVFLSTDGVVELCTHCPTRSKDFKTLKLSLKTLSFAPSTIGGEDLQGSMEIRRPILAKISFTNH
        +D++   W  S+   S  G+     +C    S+W+  VF    G +             K +K   +TL++  S      L G +   R  + ++  +  
Subjt:  RDVVPDQW-SSEVFLSTDGVVELCTHCPTRGSQWSSEVFLSTDGVVELCTHCPTRSKDFKTLKLSLKTLSFAPSTIGGEDLQGSMEIRRPILAKISFTNH

Query:  EKDRRAKHKILRSRETWLRSGNRNTKWFHSKASQRRRKNNIG-VFDSKGKWESEGDKIEKVAAEYFKRLFKSSNPRAAQIEKITSCVSTSLSDQQRRSLD
         K ++      RS+  WL  G+RNTK+FHSKAS RRRKN I  + D  G W    D I +VA  YFK L+ ++ P   +I ++   + T +S+   ++L 
Subjt:  EKDRRAKHKILRSRETWLRSGNRNTKWFHSKASQRRRKNNIG-VFDSKGKWESEGDKIEKVAAEYFKRLFKSSNPRAAQIEKITSCVSTSLSDQQRRSLD

Query:  QPYTKQEVEAALKSMNP
        + +T++E+E AL  M+P
Subjt:  QPYTKQEVEAALKSMNP

A0A803PMD0 Uncharacterized protein7.7e-1533.16Show/hide
Query:  GSQWSSEVFLSTDGVVELCTHCPTRSKDF---KTLKLSLKT--LSFAPSTIGGEDLQGSMEIRRPILAKISFTNHEKDRRAKHKILRSRETWLRSGNRNT
        GS W      S  G+ E    C    KD+   K  +L  KT  L      I   D +   ++RR I   ++    +++   K    RSR  WL  G+RNT
Subjt:  GSQWSSEVFLSTDGVVELCTHCPTRSKDF---KTLKLSLKT--LSFAPSTIGGEDLQGSMEIRRPILAKISFTNHEKDRRAKHKILRSRETWLRSGNRNT

Query:  KWFHSKASQRRRKNNI-GVFDSKGKWESEGDKIEKVAAEYFKRLFKSSNPRAAQIEKITSCVSTSLSDQQRRSLDQPYTKQEVEAALKSMNPV
        K+FH KASQR++KN I G+FD + +W  E  ++E +   YF  LF + N R   +E +  CV   LS  +   L + +TK+EV+ A+  ++P+
Subjt:  KWFHSKASQRRRKNNI-GVFDSKGKWESEGDKIEKVAAEYFKRLFKSSNPRAAQIEKITSCVSTSLSDQQRRSLDQPYTKQEVEAALKSMNPV

F4NCJ6 Reverse transcriptase domain-containing protein1.3e-1433.95Show/hide
Query:  SKDFKTLKLSLKTLSFAPSTIGGEDLQGSMEIRRPILAKISFTNHEKDRRAKHKILRSRETWLRSGNRNTKWFHSKASQRRRKNNI-GVFDSKGKWESEG
        +K FK L   ++T   A S      +  S      +L K     H K     +  LRSR   ++ G++NTK+FH KASQR+++N + G+FD  G W  E 
Subjt:  SKDFKTLKLSLKTLSFAPSTIGGEDLQGSMEIRRPILAKISFTNHEKDRRAKHKILRSRETWLRSGNRNTKWFHSKASQRRRKNNI-GVFDSKGKWESEG

Query:  DKIEKVAAEYFKRLFKSSNPRAAQIEKITSCVSTSLSDQQRRSLDQPYTKQEVEAALKSMNP
        D IE +   YF  +F SSNP    +E + S +   ++++    L +P++K E+ AAL+ M+P
Subjt:  DKIEKVAAEYFKRLFKSSNPRAAQIEKITSCVSTSLSDQQRRSLDQPYTKQEVEAALKSMNP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAGATGGACAGGGATGTTGTTCCTGATCAATGGAGTTCAGAGGTGTTTCTCTCTACTGACGGGGTGGTTGAACTTTGTACTCATTGTCCGACAAGAGGTTCTCAATG
GAGTTCAGAGGTGTTTCTCTCTACTGACGGGGTGGTTGAACTTTGTACTCATTGTCCGACAAGATCAAAGGACTTCAAGACCTTGAAACTAAGCCTAAAAACTCTGTCTT
TTGCTCCTTCAACGATTGGAGGGGAAGATTTACAGGGTTCTATGGAAATCCGGAGACCCATATTAGCCAAGATCTCCTTCACCAATCATGAAAAAGACAGAAGAGCCAAG
CACAAAATCCTCAGATCTAGAGAAACTTGGTTGAGAAGCGGAAATAGAAACACCAAATGGTTCCACTCCAAAGCATCACAAAGGAGAAGAAAGAACAACATAGGAGTTTT
CGATTCCAAAGGCAAGTGGGAATCAGAGGGAGACAAGATAGAAAAGGTGGCTGCTGAGTACTTCAAGAGGCTCTTTAAATCCTCAAACCCCAGGGCTGCCCAGATTGAAA
AAATCACAAGCTGTGTAAGTACAAGCCTCTCGGATCAACAAAGGAGGTCTCTAGATCAACCTTACACAAAGCAGGAGGTAGAGGCGGCTTTGAAGAGTATGAATCCTGTT
GGGTTTTATGCCCTAAAACTCGTAGATAGTGAATGTAACCGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGCAGATGGACAGGGATGTTGTTCCTGATCAATGGAGTTCAGAGGTGTTTCTCTCTACTGACGGGGTGGTTGAACTTTGTACTCATTGTCCGACAAGAGGTTCTCAATG
GAGTTCAGAGGTGTTTCTCTCTACTGACGGGGTGGTTGAACTTTGTACTCATTGTCCGACAAGATCAAAGGACTTCAAGACCTTGAAACTAAGCCTAAAAACTCTGTCTT
TTGCTCCTTCAACGATTGGAGGGGAAGATTTACAGGGTTCTATGGAAATCCGGAGACCCATATTAGCCAAGATCTCCTTCACCAATCATGAAAAAGACAGAAGAGCCAAG
CACAAAATCCTCAGATCTAGAGAAACTTGGTTGAGAAGCGGAAATAGAAACACCAAATGGTTCCACTCCAAAGCATCACAAAGGAGAAGAAAGAACAACATAGGAGTTTT
CGATTCCAAAGGCAAGTGGGAATCAGAGGGAGACAAGATAGAAAAGGTGGCTGCTGAGTACTTCAAGAGGCTCTTTAAATCCTCAAACCCCAGGGCTGCCCAGATTGAAA
AAATCACAAGCTGTGTAAGTACAAGCCTCTCGGATCAACAAAGGAGGTCTCTAGATCAACCTTACACAAAGCAGGAGGTAGAGGCGGCTTTGAAGAGTATGAATCCTGTT
GGGTTTTATGCCCTAAAACTCGTAGATAGTGAATGTAACCGTTGA
Protein sequenceShow/hide protein sequence
MQMDRDVVPDQWSSEVFLSTDGVVELCTHCPTRGSQWSSEVFLSTDGVVELCTHCPTRSKDFKTLKLSLKTLSFAPSTIGGEDLQGSMEIRRPILAKISFTNHEKDRRAK
HKILRSRETWLRSGNRNTKWFHSKASQRRRKNNIGVFDSKGKWESEGDKIEKVAAEYFKRLFKSSNPRAAQIEKITSCVSTSLSDQQRRSLDQPYTKQEVEAALKSMNPV
GFYALKLVDSECNR