| GenBank top hits | e value | %identity | Alignment |
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| KAA0025376.1 retrotransposon gag protein [Cucumis melo var. makuwa] | 1.4e-56 | 37.74 | Show/hide |
Query: MVVNTTLPKSSSK-------EKRQTNGTHHLTLKERQEKIYPFPDADIPDMLEQLLEAQLIELPKCKRPEEMEKVDDPKYCKYHRVVGHPVERCFVLKDS
M+V+ T KS SK K N TLKERQEK+YPFPD+D+ DMLEQLLE QLI+LP+CKRPE+ EKVDDP YCKYHRV+ HPVE+CFVLK+
Subjt: MVVNTTLPKSSSK-------EKRQTNGTHHLTLKERQEKIYPFPDADIPDMLEQLLEAQLIELPKCKRPEEMEKVDDPKYCKYHRVVGHPVERCFVLKDS
Query: ILKLAKEGKIELDLDE------------------------------------------------------------GE----------------------
ILKLA+E KIELD+DE GE
Subjt: ILKLAKEGKIELDLDE------------------------------------------------------------GE----------------------
Query: ------------------------------------------------------------------------------------------QRTSVFDRIK
QRTSVFDRIK
Subjt: ------------------------------------------------------------------------------------------QRTSVFDRIK
Query: PPTTRPLIFQRMTMVTIEEENQCSVSASVRPSSFQRLSVSTSKKSRPSTSVFDRLKVTSDQPKRKMDNLEMKLFDEVNHDKKLHSSVPSRMKRKFSILIT
P TTR +FQR++M T EEENQC R S+F+RLS+STSKK RPSTS FDRLK+T+DQ +R+M + + K F E N D K+HS VPSRMK+K + I
Subjt: PPTTRPLIFQRMTMVTIEEENQCSVSASVRPSSFQRLSVSTSKKSRPSTSVFDRLKVTSDQPKRKMDNLEMKLFDEVNHDKKLHSSVPSRMKRKFSILIT
Query: TEGSLKVKPNLIVLTNPINEGSDQ
TEGSL VKP I+ TNP NE +Q
Subjt: TEGSLKVKPNLIVLTNPINEGSDQ
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| KAA0032121.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa] | 3.6e-60 | 42.19 | Show/hide |
Query: MVVNTTLPKSSSKEKRQTNGTHH-------LTLKERQEKIYPFPDADIPDMLEQLLEAQLIELPKCKRPEEMEKVDDPKYCKYHRVVGHPVERCFVLKDS
M+V T KS SK K + +H TL+ERQ+K+YPFPD+D+ DMLEQL+E QLI+LP+CKRPE++ KVDDP YCKYHRV+ H VE+CFVLK+
Subjt: MVVNTTLPKSSSKEKRQTNGTHH-------LTLKERQEKIYPFPDADIPDMLEQLLEAQLIELPKCKRPEEMEKVDDPKYCKYHRVVGHPVERCFVLKDS
Query: ILKLAKEGKIELDL------------------------------------------------------------DEGE----------------------
I KLA+E KIELD+ DEGE
Subjt: ILKLAKEGKIELDL------------------------------------------------------------DEGE----------------------
Query: ---------------------------QRTSVFDRIKPPTTRPLIFQRMTMVTIEEENQCSVSASVRPSSFQRLSVSTSKKSRPSTSVFDRLKVTSDQPK
QRTSVFD IKP TTR +FQR++M T +EENQC + S+F+RLS+S SKK RPST FDRLK+T+DQ +
Subjt: ---------------------------QRTSVFDRIKPPTTRPLIFQRMTMVTIEEENQCSVSASVRPSSFQRLSVSTSKKSRPSTSVFDRLKVTSDQPK
Query: RKMDNLEMKLFDEVNHDKKLHSSVPSRMKRKFSILITTEGSLKVKPNLIVLTNPINEGSDQDHDK
R+M L+ K F E N D K+HS VPSRMKRK S+ I TEGSL VKP I+ TNPINEG ++ D+
Subjt: RKMDNLEMKLFDEVNHDKKLHSSVPSRMKRKFSILITTEGSLKVKPNLIVLTNPINEGSDQDHDK
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| KAA0032650.1 retrotransposon gag protein [Cucumis melo var. makuwa] | 2.6e-58 | 42.02 | Show/hide |
Query: MVVNTTLPKSSSKEK-----RQTNG--THHLTLKERQEKIYPFPDADIPDMLEQLLEAQLIELPKCKRPEEMEKVDDPKYCKYHRVVGHPVERCFVLKDS
MVV+ T KS SK K R+ +G TLKERQEK+YPF D+D+ DMLEQLLE QLI+L +CKRPE+ KVDDP YCKYHRV+ HPVE+CFVLK+
Subjt: MVVNTTLPKSSSKEK-----RQTNG--THHLTLKERQEKIYPFPDADIPDMLEQLLEAQLIELPKCKRPEEMEKVDDPKYCKYHRVVGHPVERCFVLKDS
Query: ILKLAKEGKIELD------------LDEGE----------------------------------------------------------------------
ILKLA+E KIELD D+GE
Subjt: ILKLAKEGKIELD------------LDEGE----------------------------------------------------------------------
Query: ------------------------------------------QRTSVFDRIKPPTTRPLIFQRMTMVTIEEENQCSVSASVRPSSFQRLSVSTSKKSRPS
QRTSVFDRIKP TT+ L+FQR++M T EEENQC R S+F+RLS+STSKK RPS
Subjt: ------------------------------------------QRTSVFDRIKPPTTRPLIFQRMTMVTIEEENQCSVSASVRPSSFQRLSVSTSKKSRPS
Query: TSVFDRLKVTSDQPKRKMDNLEMKLFDEVNHDKKLHSSVPSRMKRKFSILITTEGSLKVKPNLIVLTNPINEGSDQ
TS FD LK+T+DQ +R++ +L+ K F E N D K+HS VPS MKRK + I TEGSL VKP I+ TNP NEG +Q
Subjt: TSVFDRLKVTSDQPKRKMDNLEMKLFDEVNHDKKLHSSVPSRMKRKFSILITTEGSLKVKPNLIVLTNPINEGSDQ
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| KAA0056121.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa] | 1.7e-65 | 48.17 | Show/hide |
Query: MVVNTTLPKSSSKEK-----RQTNG--THHLTLKERQEKIYPFPDADIPDMLEQLLEAQLIELPKCKRPEEMEKVDDPKYCKYHRVVGHPVERCFVLKDS
MVV+ T KS SK K R+ +G TLKERQEK+YPFPD+D+ DMLEQLLE QLI+LP+CKRPE+ KVDDP YCKYHRV+ HPVE+CFVLK+
Subjt: MVVNTTLPKSSSKEK-----RQTNG--THHLTLKERQEKIYPFPDADIPDMLEQLLEAQLIELPKCKRPEEMEKVDDPKYCKYHRVVGHPVERCFVLKDS
Query: ILKLAKEGKIELDLDEG----------------------------------------------------------------------------EQRTSVF
ILKLA+E KIELD+DE QRTSVF
Subjt: ILKLAKEGKIELDLDEG----------------------------------------------------------------------------EQRTSVF
Query: DRIKPPTTRPLIFQRMTMVTIEEENQCSVSASVRPSSFQRLSVSTSKKSRPSTSVFDRLKVTSDQPKRKMDNLEMKLFDEVNHDKKLHSSVPSRMKRKFS
DRIKP TTR +FQR+++ T EEENQC R S+ +RLS+ST KK RPSTS FDRLK+T+DQ +R+M + + K F E N D K+HS VPSRMKRK
Subjt: DRIKPPTTRPLIFQRMTMVTIEEENQCSVSASVRPSSFQRLSVSTSKKSRPSTSVFDRLKVTSDQPKRKMDNLEMKLFDEVNHDKKLHSSVPSRMKRKFS
Query: ILITTEGSLKVKPNLIVLTNPINEGSDQ
+ I TEGSL VKP I+ TNP NEG +Q
Subjt: ILITTEGSLKVKPNLIVLTNPINEGSDQ
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| KAA0065984.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa] | 1.4e-64 | 47.96 | Show/hide |
Query: MVVNTTLPKSSSKEKRQTNGTHH-------LTLKERQEKIYPFPDADIPDMLEQLLEAQLIELPKCKRPEEMEKVDDPKYCKYHRVVGHPVERCFVLKDS
MVV T KS SK K + +H TL+ERQ+K+YPFPD+D+ DMLEQL+E QLI+L CKRP + KVDDP YCKYHRV+ HPVE+CFVLK+
Subjt: MVVNTTLPKSSSKEKRQTNGTHH-------LTLKERQEKIYPFPDADIPDMLEQLLEAQLIELPKCKRPEEMEKVDDPKYCKYHRVVGHPVERCFVLKDS
Query: ILKLAKEGKIELDLDEG---------------------------------------------------------------EQRTSVFDRIKPPTTRPLIF
ILKLA+E KI+LD+DE +QRTSVFDRIKP TTR L+F
Subjt: ILKLAKEGKIELDLDEG---------------------------------------------------------------EQRTSVFDRIKPPTTRPLIF
Query: QRMTMVTIEEENQCSVSASVRPSSFQRLSVSTSKKSRPSTSVFDRLKVTSDQPKRKMDNLEMKLFDEVNHDKKLHSSVPSRMKRKFSILITTEGSLKVKP
QR++M T EEENQC S R S+F+RLS+STSKK RPSTS FDRLK+ +DQ +R+M +L+ K F E N D K+HS +PS RK S+ I EGSL VKP
Subjt: QRMTMVTIEEENQCSVSASVRPSSFQRLSVSTSKKSRPSTSVFDRLKVTSDQPKRKMDNLEMKLFDEVNHDKKLHSSVPSRMKRKFSILITTEGSLKVKP
Query: NLIVLTNPINEGSDQDHDK
I+ TNPINEG ++ D+
Subjt: NLIVLTNPINEGSDQDHDK
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7SHQ6 Retrotransposon gag protein | 6.9e-57 | 37.74 | Show/hide |
Query: MVVNTTLPKSSSK-------EKRQTNGTHHLTLKERQEKIYPFPDADIPDMLEQLLEAQLIELPKCKRPEEMEKVDDPKYCKYHRVVGHPVERCFVLKDS
M+V+ T KS SK K N TLKERQEK+YPFPD+D+ DMLEQLLE QLI+LP+CKRPE+ EKVDDP YCKYHRV+ HPVE+CFVLK+
Subjt: MVVNTTLPKSSSK-------EKRQTNGTHHLTLKERQEKIYPFPDADIPDMLEQLLEAQLIELPKCKRPEEMEKVDDPKYCKYHRVVGHPVERCFVLKDS
Query: ILKLAKEGKIELDLDE------------------------------------------------------------GE----------------------
ILKLA+E KIELD+DE GE
Subjt: ILKLAKEGKIELDLDE------------------------------------------------------------GE----------------------
Query: ------------------------------------------------------------------------------------------QRTSVFDRIK
QRTSVFDRIK
Subjt: ------------------------------------------------------------------------------------------QRTSVFDRIK
Query: PPTTRPLIFQRMTMVTIEEENQCSVSASVRPSSFQRLSVSTSKKSRPSTSVFDRLKVTSDQPKRKMDNLEMKLFDEVNHDKKLHSSVPSRMKRKFSILIT
P TTR +FQR++M T EEENQC R S+F+RLS+STSKK RPSTS FDRLK+T+DQ +R+M + + K F E N D K+HS VPSRMK+K + I
Subjt: PPTTRPLIFQRMTMVTIEEENQCSVSASVRPSSFQRLSVSTSKKSRPSTSVFDRLKVTSDQPKRKMDNLEMKLFDEVNHDKKLHSSVPSRMKRKFSILIT
Query: TEGSLKVKPNLIVLTNPINEGSDQ
TEGSL VKP I+ TNP NE +Q
Subjt: TEGSLKVKPNLIVLTNPINEGSDQ
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| A0A5A7SP56 Retrotransposon gag protein | 1.3e-58 | 42.02 | Show/hide |
Query: MVVNTTLPKSSSKEK-----RQTNG--THHLTLKERQEKIYPFPDADIPDMLEQLLEAQLIELPKCKRPEEMEKVDDPKYCKYHRVVGHPVERCFVLKDS
MVV+ T KS SK K R+ +G TLKERQEK+YPF D+D+ DMLEQLLE QLI+L +CKRPE+ KVDDP YCKYHRV+ HPVE+CFVLK+
Subjt: MVVNTTLPKSSSKEK-----RQTNG--THHLTLKERQEKIYPFPDADIPDMLEQLLEAQLIELPKCKRPEEMEKVDDPKYCKYHRVVGHPVERCFVLKDS
Query: ILKLAKEGKIELD------------LDEGE----------------------------------------------------------------------
ILKLA+E KIELD D+GE
Subjt: ILKLAKEGKIELD------------LDEGE----------------------------------------------------------------------
Query: ------------------------------------------QRTSVFDRIKPPTTRPLIFQRMTMVTIEEENQCSVSASVRPSSFQRLSVSTSKKSRPS
QRTSVFDRIKP TT+ L+FQR++M T EEENQC R S+F+RLS+STSKK RPS
Subjt: ------------------------------------------QRTSVFDRIKPPTTRPLIFQRMTMVTIEEENQCSVSASVRPSSFQRLSVSTSKKSRPS
Query: TSVFDRLKVTSDQPKRKMDNLEMKLFDEVNHDKKLHSSVPSRMKRKFSILITTEGSLKVKPNLIVLTNPINEGSDQ
TS FD LK+T+DQ +R++ +L+ K F E N D K+HS VPS MKRK + I TEGSL VKP I+ TNP NEG +Q
Subjt: TSVFDRLKVTSDQPKRKMDNLEMKLFDEVNHDKKLHSSVPSRMKRKFSILITTEGSLKVKPNLIVLTNPINEGSDQ
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| A0A5A7SRE2 Ty3-gypsy retrotransposon protein | 1.8e-60 | 42.19 | Show/hide |
Query: MVVNTTLPKSSSKEKRQTNGTHH-------LTLKERQEKIYPFPDADIPDMLEQLLEAQLIELPKCKRPEEMEKVDDPKYCKYHRVVGHPVERCFVLKDS
M+V T KS SK K + +H TL+ERQ+K+YPFPD+D+ DMLEQL+E QLI+LP+CKRPE++ KVDDP YCKYHRV+ H VE+CFVLK+
Subjt: MVVNTTLPKSSSKEKRQTNGTHH-------LTLKERQEKIYPFPDADIPDMLEQLLEAQLIELPKCKRPEEMEKVDDPKYCKYHRVVGHPVERCFVLKDS
Query: ILKLAKEGKIELDL------------------------------------------------------------DEGE----------------------
I KLA+E KIELD+ DEGE
Subjt: ILKLAKEGKIELDL------------------------------------------------------------DEGE----------------------
Query: ---------------------------QRTSVFDRIKPPTTRPLIFQRMTMVTIEEENQCSVSASVRPSSFQRLSVSTSKKSRPSTSVFDRLKVTSDQPK
QRTSVFD IKP TTR +FQR++M T +EENQC + S+F+RLS+S SKK RPST FDRLK+T+DQ +
Subjt: ---------------------------QRTSVFDRIKPPTTRPLIFQRMTMVTIEEENQCSVSASVRPSSFQRLSVSTSKKSRPSTSVFDRLKVTSDQPK
Query: RKMDNLEMKLFDEVNHDKKLHSSVPSRMKRKFSILITTEGSLKVKPNLIVLTNPINEGSDQDHDK
R+M L+ K F E N D K+HS VPSRMKRK S+ I TEGSL VKP I+ TNPINEG ++ D+
Subjt: RKMDNLEMKLFDEVNHDKKLHSSVPSRMKRKFSILITTEGSLKVKPNLIVLTNPINEGSDQDHDK
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| A0A5A7URH1 Ty3-gypsy retrotransposon protein | 8.2e-66 | 48.17 | Show/hide |
Query: MVVNTTLPKSSSKEK-----RQTNG--THHLTLKERQEKIYPFPDADIPDMLEQLLEAQLIELPKCKRPEEMEKVDDPKYCKYHRVVGHPVERCFVLKDS
MVV+ T KS SK K R+ +G TLKERQEK+YPFPD+D+ DMLEQLLE QLI+LP+CKRPE+ KVDDP YCKYHRV+ HPVE+CFVLK+
Subjt: MVVNTTLPKSSSKEK-----RQTNG--THHLTLKERQEKIYPFPDADIPDMLEQLLEAQLIELPKCKRPEEMEKVDDPKYCKYHRVVGHPVERCFVLKDS
Query: ILKLAKEGKIELDLDEG----------------------------------------------------------------------------EQRTSVF
ILKLA+E KIELD+DE QRTSVF
Subjt: ILKLAKEGKIELDLDEG----------------------------------------------------------------------------EQRTSVF
Query: DRIKPPTTRPLIFQRMTMVTIEEENQCSVSASVRPSSFQRLSVSTSKKSRPSTSVFDRLKVTSDQPKRKMDNLEMKLFDEVNHDKKLHSSVPSRMKRKFS
DRIKP TTR +FQR+++ T EEENQC R S+ +RLS+ST KK RPSTS FDRLK+T+DQ +R+M + + K F E N D K+HS VPSRMKRK
Subjt: DRIKPPTTRPLIFQRMTMVTIEEENQCSVSASVRPSSFQRLSVSTSKKSRPSTSVFDRLKVTSDQPKRKMDNLEMKLFDEVNHDKKLHSSVPSRMKRKFS
Query: ILITTEGSLKVKPNLIVLTNPINEGSDQ
+ I TEGSL VKP I+ TNP NEG +Q
Subjt: ILITTEGSLKVKPNLIVLTNPINEGSDQ
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| A0A5A7VFA5 Ty3-gypsy retrotransposon protein | 6.9e-65 | 47.96 | Show/hide |
Query: MVVNTTLPKSSSKEKRQTNGTHH-------LTLKERQEKIYPFPDADIPDMLEQLLEAQLIELPKCKRPEEMEKVDDPKYCKYHRVVGHPVERCFVLKDS
MVV T KS SK K + +H TL+ERQ+K+YPFPD+D+ DMLEQL+E QLI+L CKRP + KVDDP YCKYHRV+ HPVE+CFVLK+
Subjt: MVVNTTLPKSSSKEKRQTNGTHH-------LTLKERQEKIYPFPDADIPDMLEQLLEAQLIELPKCKRPEEMEKVDDPKYCKYHRVVGHPVERCFVLKDS
Query: ILKLAKEGKIELDLDEG---------------------------------------------------------------EQRTSVFDRIKPPTTRPLIF
ILKLA+E KI+LD+DE +QRTSVFDRIKP TTR L+F
Subjt: ILKLAKEGKIELDLDEG---------------------------------------------------------------EQRTSVFDRIKPPTTRPLIF
Query: QRMTMVTIEEENQCSVSASVRPSSFQRLSVSTSKKSRPSTSVFDRLKVTSDQPKRKMDNLEMKLFDEVNHDKKLHSSVPSRMKRKFSILITTEGSLKVKP
QR++M T EEENQC S R S+F+RLS+STSKK RPSTS FDRLK+ +DQ +R+M +L+ K F E N D K+HS +PS RK S+ I EGSL VKP
Subjt: QRMTMVTIEEENQCSVSASVRPSSFQRLSVSTSKKSRPSTSVFDRLKVTSDQPKRKMDNLEMKLFDEVNHDKKLHSSVPSRMKRKFSILITTEGSLKVKP
Query: NLIVLTNPINEGSDQDHDK
I+ TNPINEG ++ D+
Subjt: NLIVLTNPINEGSDQDHDK
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