; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0017764 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0017764
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Descriptionzf-RVT domain-containing protein
Genome locationchr5:8395014..8397184
RNA-Seq ExpressionLag0017764
SyntenyLag0017764
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF4346094.1 hypothetical protein G4B88_009149 [Cannabis sativa]8.4e-1735.16Show/hide
Query:  VLWARDLLLVGMRKRVSNGKSIELFKDPWIPKEATFKPMKVQGTNVQEVLMVFEFLTPS-LGWDLDKLRNVVIEDDVRFFATNPISAVDEEDKWIWNYTP
        ++W R+LL+ G+RKRV  G +I +F+DPW+P+  +FKP     ++    L+V + +  + +GW++D LR +  E D +   + P+    +ED W+W+YT 
Subjt:  VLWARDLLLVGMRKRVSNGKSIELFKDPWIPKEATFKPMKVQGTNVQEVLMVFEFLTPS-LGWDLDKLRNVVIEDDVRFFATNPISAVDEEDKWIWNYTP

Query:  NGAYSIKSGYKVVLGQTSTGCNNQRNGF
        +G+YS+KSGY V      T  +  ++ F
Subjt:  NGAYSIKSGYKVVLGQTSTGCNNQRNGF

KAF4348261.1 hypothetical protein G4B88_002662, partial [Cannabis sativa]2.2e-1741.07Show/hide
Query:  VLWARDLLLVGMRKRVSNGKSIELFKDPWIPKEATFKPMKVQGTNVQEVLMVFEFLTPS-LGWDLDKLRNVVIEDDVRFFATNPISAVDEEDKWIWNYTP
        ++W R+LLL G+RK+V  G +I +FKDPW+P+  +FKP     ++    L+V E +  + +GW++D LR +  E D +   + P+    +ED W+W+YT 
Subjt:  VLWARDLLLVGMRKRVSNGKSIELFKDPWIPKEATFKPMKVQGTNVQEVLMVFEFLTPS-LGWDLDKLRNVVIEDDVRFFATNPISAVDEEDKWIWNYTP

Query:  NGAYSIKSGYKV
        +G+YSIKSGY V
Subjt:  NGAYSIKSGYKV

KAF4372268.1 hypothetical protein G4B88_007012 [Cannabis sativa]8.4e-1735.16Show/hide
Query:  VLWARDLLLVGMRKRVSNGKSIELFKDPWIPKEATFKPMKVQGTNVQEVLMVFEFLTPS-LGWDLDKLRNVVIEDDVRFFATNPISAVDEEDKWIWNYTP
        ++W R+LL+ G+RKRV  G +I +F+DPW+P+  +FKP     ++    L+V + +  + +GW++D LR +  E D +   + P+    +ED W+W+YT 
Subjt:  VLWARDLLLVGMRKRVSNGKSIELFKDPWIPKEATFKPMKVQGTNVQEVLMVFEFLTPS-LGWDLDKLRNVVIEDDVRFFATNPISAVDEEDKWIWNYTP

Query:  NGAYSIKSGYKVVLGQTSTGCNNQRNGF
        +G+YS+KSGY V      T  +  ++ F
Subjt:  NGAYSIKSGYKVVLGQTSTGCNNQRNGF

XP_022158377.1 uncharacterized protein LOC111024874 [Momordica charantia]2.9e-1737.5Show/hide
Query:  LWARDLLLVGMRKRVSNGKSIELFKDPWIPKEATFKPMKVQGTNVQEVLMVFEFLTPSLGWDLDKLRNVVIEDDVRFFATNPISAVDEEDKWIWNYTPNG
        LW RDLL+ G+R RV NG +I+ F DPW+P+  TFKP++     +     V  F+T    WD+  + +    +D     + PIS+ + +D W+W+Y   G
Subjt:  LWARDLLLVGMRKRVSNGKSIELFKDPWIPKEATFKPMKVQGTNVQEVLMVFEFLTPSLGWDLDKLRNVVIEDDVRFFATNPISAVDEEDKWIWNYTPNG

Query:  AYSIKSGYKVVL
         YS++SGYK+ +
Subjt:  AYSIKSGYKVVL

XP_030505522.1 uncharacterized protein LOC115720515 [Cannabis sativa]2.2e-1735.09Show/hide
Query:  VLWARDLLLVGMRKRVSNGKSIELFKDPWIPKEATFKPMKVQGTNVQEVLMVFEFLTPSLGWDLDKLRNVVIEDDVRFFATNPISAVDEEDKWIWNYTPN
        ++W ++LL+ G+R+R+ NG +  +FKDPWIP+  +F P+  +   V  ++MV E +  S  W++D +  V    D +   + PI+  + +D W+W++T +
Subjt:  VLWARDLLLVGMRKRVSNGKSIELFKDPWIPKEATFKPMKVQGTNVQEVLMVFEFLTPSLGWDLDKLRNVVIEDDVRFFATNPISAVDEEDKWIWNYTPN

Query:  GAYSIKSGYKVVLG
        G YS+KSGY + +G
Subjt:  GAYSIKSGYKVVLG

TrEMBL top hitse value%identityAlignment
A0A6J1DX30 uncharacterized protein LOC1110248741.4e-1737.5Show/hide
Query:  LWARDLLLVGMRKRVSNGKSIELFKDPWIPKEATFKPMKVQGTNVQEVLMVFEFLTPSLGWDLDKLRNVVIEDDVRFFATNPISAVDEEDKWIWNYTPNG
        LW RDLL+ G+R RV NG +I+ F DPW+P+  TFKP++     +     V  F+T    WD+  + +    +D     + PIS+ + +D W+W+Y   G
Subjt:  LWARDLLLVGMRKRVSNGKSIELFKDPWIPKEATFKPMKVQGTNVQEVLMVFEFLTPSLGWDLDKLRNVVIEDDVRFFATNPISAVDEEDKWIWNYTPNG

Query:  AYSIKSGYKVVL
         YS++SGYK+ +
Subjt:  AYSIKSGYKVVL

A0A7J6DQ84 zf-RVT domain-containing protein (Fragment)1.1e-1741.07Show/hide
Query:  VLWARDLLLVGMRKRVSNGKSIELFKDPWIPKEATFKPMKVQGTNVQEVLMVFEFLTPS-LGWDLDKLRNVVIEDDVRFFATNPISAVDEEDKWIWNYTP
        ++W R+LLL G+RK+V  G +I +FKDPW+P+  +FKP     ++    L+V E +  + +GW++D LR +  E D +   + P+    +ED W+W+YT 
Subjt:  VLWARDLLLVGMRKRVSNGKSIELFKDPWIPKEATFKPMKVQGTNVQEVLMVFEFLTPS-LGWDLDKLRNVVIEDDVRFFATNPISAVDEEDKWIWNYTP

Query:  NGAYSIKSGYKV
        +G+YSIKSGY V
Subjt:  NGAYSIKSGYKV

A0A7J6FNQ8 zf-RVT domain-containing protein4.1e-1735.16Show/hide
Query:  VLWARDLLLVGMRKRVSNGKSIELFKDPWIPKEATFKPMKVQGTNVQEVLMVFEFLTPS-LGWDLDKLRNVVIEDDVRFFATNPISAVDEEDKWIWNYTP
        ++W R+LL+ G+RKRV  G +I +F+DPW+P+  +FKP     ++    L+V + +  + +GW++D LR +  E D +   + P+    +ED W+W+YT 
Subjt:  VLWARDLLLVGMRKRVSNGKSIELFKDPWIPKEATFKPMKVQGTNVQEVLMVFEFLTPS-LGWDLDKLRNVVIEDDVRFFATNPISAVDEEDKWIWNYTP

Query:  NGAYSIKSGYKVVLGQTSTGCNNQRNGF
        +G+YS+KSGY V      T  +  ++ F
Subjt:  NGAYSIKSGYKVVLGQTSTGCNNQRNGF

A0A7J6HIJ1 Uncharacterized protein4.1e-1735.16Show/hide
Query:  VLWARDLLLVGMRKRVSNGKSIELFKDPWIPKEATFKPMKVQGTNVQEVLMVFEFLTPS-LGWDLDKLRNVVIEDDVRFFATNPISAVDEEDKWIWNYTP
        ++W R+LL+ G+RKRV  G +I +F+DPW+P+  +FKP     ++    L+V + +  + +GW++D LR +  E D +   + P+    +ED W+W+YT 
Subjt:  VLWARDLLLVGMRKRVSNGKSIELFKDPWIPKEATFKPMKVQGTNVQEVLMVFEFLTPS-LGWDLDKLRNVVIEDDVRFFATNPISAVDEEDKWIWNYTP

Query:  NGAYSIKSGYKVVLGQTSTGCNNQRNGF
        +G+YS+KSGY V      T  +  ++ F
Subjt:  NGAYSIKSGYKVVLGQTSTGCNNQRNGF

M5XJH9 Uncharacterized protein (Fragment)3.1e-1730.54Show/hide
Query:  RAIVQFSGEVLWARDLLLVGMRKRVSNGKSIELFKDPWIPKEATFKPMKVQGTNVQEVLMVFEFLTPSLGWDLDKLRNVVIEDDVRFFATNPISAVDEED
        RA   F   ++W  +LLL G+RKR+ +G+   ++ D WIP+  +F+P+  Q   + +   V +F+ P   W++D L     E+DV+   + P+S    +D
Subjt:  RAIVQFSGEVLWARDLLLVGMRKRVSNGKSIELFKDPWIPKEATFKPMKVQGTNVQEVLMVFEFLTPSLGWDLDKLRNVVIEDDVRFFATNPISAVDEED

Query:  KWIWNYTPNGAYSIKSGYKVVLGQT--------STGCNNQRNGFCKDMPLRGRLVRRNLIGMEWDVI
        +W+W+YT NG YS+KSGY++ + +         S+     RN F +   +  + VR+ ++   W  I
Subjt:  KWIWNYTPNGAYSIKSGYKVVLGQT--------STGCNNQRNGFCKDMPLRGRLVRRNLIGMEWDVI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G09510.1 Ribonuclease H-like superfamily protein2.7e-0526.55Show/hide
Query:  LLLVGMRKRVSNGKSIELFKDPWIPKEATFKPMKVQGTNVQEVL-MVFEFLTPSLGWDLDKLRNVVIEDDVRFFATNPISAVDEEDKWIWNYTPNGAYSI
        LL  G R  + +G++I +  D  +      +P+  + T  +  +  +FE       WD  K+   V + D  F     ++   + DK IWNY   G Y++
Subjt:  LLLVGMRKRVSNGKSIELFKDPWIPKEATFKPMKVQGTNVQEVL-MVFEFLTPSLGWDLDKLRNVVIEDDVRFFATNPISAVDEEDKWIWNYTPNGAYSI

Query:  KSGYKVVLGQTST
        +SGY ++    ST
Subjt:  KSGYKVVLGQTST

AT4G29090.1 Ribonuclease H-like superfamily protein7.8e-0524.14Show/hide
Query:  ARDLLLVGMRKRVSNGKSIELFKDPWIPKEATFKPMKVQGTNVQEVLMVFEFLTPS-------LGWDLDKLRNVVIEDDVRFFATNPISAVDEEDKWIWN
        ++++L  G R  V NG+ I +++  W+  +     +++Q    QE   V   L  S         W  D +  +  E + +             D + W+
Subjt:  ARDLLLVGMRKRVSNGKSIELFKDPWIPKEATFKPMKVQGTNVQEVLMVFEFLTPS-------LGWDLDKLRNVVIEDDVRFFATNPISAVDEEDKWIWN

Query:  YTPNGAYSIKSGYKVV
        YT +G Y++KSGY V+
Subjt:  YTPNGAYSIKSGYKVV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTTTTCTCTTATATCATCAAATTTGGCATCAAAAGTCATTCAAGGTCGATACGCCCATCAAGCCTCCTTGTTGGAAGCTCCAATTAAGGGCAATTGTTCAGTTTTC
TGGAGAGGTCTTGTGGGCACGTGATCTTTTGCTTGTGGGTATGAGGAAAAGAGTAAGCAATGGTAAATCCATCGAGCTTTTTAAAGATCCATGGATTCCAAAGGAAGCCA
CATTTAAGCCTATGAAGGTTCAGGGAACAAATGTTCAGGAGGTTTTGATGGTTTTTGAGTTTCTCACTCCATCTTTAGGATGGGATTTGGATAAACTTAGGAATGTTGTG
ATTGAAGATGATGTAAGGTTTTTCGCTACAAATCCTATTAGCGCTGTAGATGAGGAGGATAAATGGATTTGGAATTATACTCCAAATGGGGCTTATTCGATTAAAAGTGG
ATATAAAGTTGTTTTGGGTCAAACGTCAACAGGCTGCAACAATCAAAGGAATGGGTTCTGCAAGGATATGCCTCTTAGGGGCCGTTTGGTGCGCCGGAATTTGATTGGAA
TGGAATGGGATGTGATTCTCATGGGAATATTTTGTTGGAATCATGATTCCTATGGCTATGCGGAGGTTCAAGTGCTTAAAGCAAGATCGGGATTGGGAGCAGTAGTTCTT
GGACCGGATGGATATCTCTCTCTCCGTCTGCAACACGTCATCGATACGCGCCGCCTCGCCGTCGCCGCACGTCGAAATGCCTCTGGCTGTCGCCGCACGTCGAAACGCCT
CACGCCACCGTCGCCCAGAACGTCGTGCCGTCGTCGTATCTTGTTCTCCTTCGGTCAGACTCCCTCATTACGGCAGCAGCCACAAGCAACCACTGCCGCCCTCGATCTTG
TCCGTTTGTTTTTTAGATCTGTGGTCGCCGCTGTTCAAGTTGCTCGTCGCTTCGTAGATCTGTGTATCGCTGTCCAGATTGTTTCGTCGTCATTGTTCGATTTCAGCCGT
ACTTCTAAAGAATTTGTTGGGTAA
mRNA sequenceShow/hide mRNA sequence
ATGTCTTTTCTCTTATATCATCAAATTTGGCATCAAAAGTCATTCAAGGTCGATACGCCCATCAAGCCTCCTTGTTGGAAGCTCCAATTAAGGGCAATTGTTCAGTTTTC
TGGAGAGGTCTTGTGGGCACGTGATCTTTTGCTTGTGGGTATGAGGAAAAGAGTAAGCAATGGTAAATCCATCGAGCTTTTTAAAGATCCATGGATTCCAAAGGAAGCCA
CATTTAAGCCTATGAAGGTTCAGGGAACAAATGTTCAGGAGGTTTTGATGGTTTTTGAGTTTCTCACTCCATCTTTAGGATGGGATTTGGATAAACTTAGGAATGTTGTG
ATTGAAGATGATGTAAGGTTTTTCGCTACAAATCCTATTAGCGCTGTAGATGAGGAGGATAAATGGATTTGGAATTATACTCCAAATGGGGCTTATTCGATTAAAAGTGG
ATATAAAGTTGTTTTGGGTCAAACGTCAACAGGCTGCAACAATCAAAGGAATGGGTTCTGCAAGGATATGCCTCTTAGGGGCCGTTTGGTGCGCCGGAATTTGATTGGAA
TGGAATGGGATGTGATTCTCATGGGAATATTTTGTTGGAATCATGATTCCTATGGCTATGCGGAGGTTCAAGTGCTTAAAGCAAGATCGGGATTGGGAGCAGTAGTTCTT
GGACCGGATGGATATCTCTCTCTCCGTCTGCAACACGTCATCGATACGCGCCGCCTCGCCGTCGCCGCACGTCGAAATGCCTCTGGCTGTCGCCGCACGTCGAAACGCCT
CACGCCACCGTCGCCCAGAACGTCGTGCCGTCGTCGTATCTTGTTCTCCTTCGGTCAGACTCCCTCATTACGGCAGCAGCCACAAGCAACCACTGCCGCCCTCGATCTTG
TCCGTTTGTTTTTTAGATCTGTGGTCGCCGCTGTTCAAGTTGCTCGTCGCTTCGTAGATCTGTGTATCGCTGTCCAGATTGTTTCGTCGTCATTGTTCGATTTCAGCCGT
ACTTCTAAAGAATTTGTTGGGTAA
Protein sequenceShow/hide protein sequence
MSFLLYHQIWHQKSFKVDTPIKPPCWKLQLRAIVQFSGEVLWARDLLLVGMRKRVSNGKSIELFKDPWIPKEATFKPMKVQGTNVQEVLMVFEFLTPSLGWDLDKLRNVV
IEDDVRFFATNPISAVDEEDKWIWNYTPNGAYSIKSGYKVVLGQTSTGCNNQRNGFCKDMPLRGRLVRRNLIGMEWDVILMGIFCWNHDSYGYAEVQVLKARSGLGAVVL
GPDGYLSLRLQHVIDTRRLAVAARRNASGCRRTSKRLTPPSPRTSCRRRILFSFGQTPSLRQQPQATTAALDLVRLFFRSVVAAVQVARRFVDLCIAVQIVSSSLFDFSR
TSKEFVG