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Lag0017769 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0017769
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionSWIM-type domain-containing protein
Genome locationchr5:8482678..8484786
RNA-Seq ExpressionLag0017769
SyntenyLag0017769
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE9463232.1 hypothetical protein C3L33_04867, partial [Rhododendron williamsianum]2.1e-0731.11Show/hide
Query:  HYNGRIQYNPRVEYFGGKVSVVKDVEPSGLTILDLSVLTAYLGVCNAAWFGYVVPGKTLSTGYKGILTDDDILDMVEMLPEDRMIHMYVE
        H+ G+    PR++Y GG ++ + +     +++L++  L   LG      + YV+ G+T++ G K +L+D D+LDM++ LP  R++ +Y+E
Subjt:  HYNGRIQYNPRVEYFGGKVSVVKDVEPSGLTILDLSVLTAYLGVCNAAWFGYVVPGKTLSTGYKGILTDDDILDMVEMLPEDRMIHMYVE

KAF7150218.1 hypothetical protein RHSIM_Rhsim02G0197700 [Rhododendron simsii]1.0e-0935.79Show/hide
Query:  FTITFHYNGRIQYNPRVEYFGGKVSVVKDVEPSGLTILDLSVLTAYLGVCNAAWFGYVVPGKTLSTGYKGILTDDDILDMVEMLPEDRMIHMYVE
        FTI  H+ G+    P + Y GG V   +  +P  ++++ +  +   LG      + YV+ GK ++ G K +LTD DI+DM+E LP  R++ MYVE
Subjt:  FTITFHYNGRIQYNPRVEYFGGKVSVVKDVEPSGLTILDLSVLTAYLGVCNAAWFGYVVPGKTLSTGYKGILTDDDILDMVEMLPEDRMIHMYVE

KAG5544429.1 hypothetical protein RHGRI_017001 [Rhododendron griersonianum]5.5e-0831.53Show/hide
Query:  RRRSSTAATMWSRRFTITFHYNGRIQYNPR--VEYFGGKVSVVKDVEPSGLTILDLSVLTAYLGVCNAAWFGYVVPGKTLSTGYKGILTDDDILDMVEML
        ++  +T    WS   TI  H     + NPR  + Y GG V+ V + +P  ++++ +  +   LG      + YV+ GK ++ G + +LTD D+++M+E L
Subjt:  RRRSSTAATMWSRRFTITFHYNGRIQYNPR--VEYFGGKVSVVKDVEPSGLTILDLSVLTAYLGVCNAAWFGYVVPGKTLSTGYKGILTDDDILDMVEML

Query:  PEDRMIHMYVE
        P  R++ MYVE
Subjt:  PEDRMIHMYVE

KAG5551827.1 hypothetical protein RHGRI_010056 [Rhododendron griersonianum]2.1e-0731.58Show/hide
Query:  FTITFHYNGRIQYNPRVEYFGGKVSVVKDVEPSGLTILDLSVLTAYLGVCNAAWFGYVVPGKTLSTGYKGILTDDDILDMVEMLPEDRMIHMYVE
        FTI  H+ G+    P + Y GG V   +   P  ++++ +  +   LG      + YV+ GK +  G + +LTD DI++M++ LP  R + MY+E
Subjt:  FTITFHYNGRIQYNPRVEYFGGKVSVVKDVEPSGLTILDLSVLTAYLGVCNAAWFGYVVPGKTLSTGYKGILTDDDILDMVEMLPEDRMIHMYVE

KAG5556147.1 hypothetical protein RHGRI_006689 [Rhododendron griersonianum]2.5e-0832.63Show/hide
Query:  FTITFHYNGRIQYNPRVEYFGGKVSVVKDVEPSGLTILDLSVLTAYLGVCNAAWFGYVVPGKTLSTGYKGILTDDDILDMVEMLPEDRMIHMYVE
        FT+  H  G+    PR++Y GG ++ V +     +++L++  L   LG      + YV+ G+T++ G K +L+D D+LDM++ LP  R++ +Y+E
Subjt:  FTITFHYNGRIQYNPRVEYFGGKVSVVKDVEPSGLTILDLSVLTAYLGVCNAAWFGYVVPGKTLSTGYKGILTDDDILDMVEMLPEDRMIHMYVE

TrEMBL top hitse value%identityAlignment
A0A2N9FZE3 SWIM-type domain-containing protein3.3e-0636.27Show/hide
Query:  FTITFHYNGRIQ-YNPRVEYFGGKVSVVKDVEPSGLTILDLSVLTAYLGVCNAAWFGYVVPGKTLSTGYKGILTDDDILDMVEML-PEDRMIHMYVEH-N
        FT+  HYNG +  ++ R +Y GG V V  ++E    ++ ++  +   LGV N   F YV+PG  LS G + + TD  I++M + L P +  + +YVEH  
Subjt:  FTITFHYNGRIQ-YNPRVEYFGGKVSVVKDVEPSGLTILDLSVLTAYLGVCNAAWFGYVVPGKTLSTGYKGILTDDDILDMVEML-PEDRMIHMYVEH-N

Query:  PN
        PN
Subjt:  PN

A0A2N9HT52 SWIM-type domain-containing protein3.3e-0636.27Show/hide
Query:  FTITFHYNGRIQ-YNPRVEYFGGKVSVVKDVEPSGLTILDLSVLTAYLGVCNAAWFGYVVPGKTLSTGYKGILTDDDILDMVEML-PEDRMIHMYVEH-N
        FT+  HYNG +  ++ R +Y GG V V  ++E    ++ ++  +   LGV N   F YV+PG  LS G + + TD  I++M + L P +  + +YVEH  
Subjt:  FTITFHYNGRIQ-YNPRVEYFGGKVSVVKDVEPSGLTILDLSVLTAYLGVCNAAWFGYVVPGKTLSTGYKGILTDDDILDMVEML-PEDRMIHMYVEH-N

Query:  PN
        PN
Subjt:  PN

A0A2N9I0N2 SWIM-type domain-containing protein3.3e-0636.27Show/hide
Query:  FTITFHYNGRIQ-YNPRVEYFGGKVSVVKDVEPSGLTILDLSVLTAYLGVCNAAWFGYVVPGKTLSTGYKGILTDDDILDMVEML-PEDRMIHMYVEH-N
        FT+  HYNG +  ++ R +Y GG V V  ++E    ++ ++  +   LGV N   F YV+PG  LS G + + TD  I++M + L P +  + +YVEH  
Subjt:  FTITFHYNGRIQ-YNPRVEYFGGKVSVVKDVEPSGLTILDLSVLTAYLGVCNAAWFGYVVPGKTLSTGYKGILTDDDILDMVEML-PEDRMIHMYVEH-N

Query:  PN
        PN
Subjt:  PN

A0A6A4M1F5 DBD_Tnp_Mut domain-containing protein (Fragment)1.0e-0731.11Show/hide
Query:  HYNGRIQYNPRVEYFGGKVSVVKDVEPSGLTILDLSVLTAYLGVCNAAWFGYVVPGKTLSTGYKGILTDDDILDMVEMLPEDRMIHMYVE
        H+ G+    PR++Y GG ++ + +     +++L++  L   LG      + YV+ G+T++ G K +L+D D+LDM++ LP  R++ +Y+E
Subjt:  HYNGRIQYNPRVEYFGGKVSVVKDVEPSGLTILDLSVLTAYLGVCNAAWFGYVVPGKTLSTGYKGILTDDDILDMVEMLPEDRMIHMYVE

A0A6V7PHY2 Uncharacterized protein1.5e-0628.04Show/hide
Query:  TITFHYNGRIQYNPRVEYFGGKVSVVKDVEPSGLTILDLSVLTAYLGVCNAAWFGYVVPGKTLSTGYKGILTDDDILDMVEMLPEDRMIHMYVEHNPNRE
        T+  HY G  + +P  EY+GGK+S   +V+P  ++I++L  +   LG+   +   Y +P   +S G K +  D  +LDM++   E  +I +Y+    + E
Subjt:  TITFHYNGRIQYNPRVEYFGGKVSVVKDVEPSGLTILDLSVLTAYLGVCNAAWFGYVVPGKTLSTGYKGILTDDDILDMVEMLPEDRMIHMYVEHNPNRE

Query:  IID--FTREMTKNVEGTDKEEMDYMVEKEMEKHVDGSDKEEIASMEGTDQNHLEVVEEDPFEYCDEEWDGDESEDDGHD-----DNDKD
        ++D     E+T++V+   ++  +   E E++K  DG  K++    E  ++N  EVVEE+  E  +++ +     D  H+     D+D+D
Subjt:  IID--FTREMTKNVEGTDKEEMDYMVEKEMEKHVDGSDKEEIASMEGTDQNHLEVVEEDPFEYCDEEWDGDESEDDGHD-----DNDKD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTGGAGTTCCGGTGGCGATGGACGTCGGATCGGGATTGGATTTGTGGCAGAGTTCGTCGGAGTGGCGGCGGCGTAGGTCTTCAACGGCGGCGACAATGTGGTCTAG
GCGTTTCACCATTACATTTCACTACAATGGGAGAATACAATATAATCCTAGGGTTGAGTATTTTGGGGGAAAGGTATCTGTGGTGAAAGACGTAGAACCCAGTGGCCTAA
CGATCCTAGATTTATCTGTCCTCACAGCATACCTAGGTGTATGTAATGCTGCTTGGTTTGGTTACGTGGTGCCAGGGAAAACATTGAGTACGGGATATAAGGGGATTCTG
ACCGATGACGATATTTTGGATATGGTTGAGATGCTCCCAGAGGATAGGATGATCCATATGTATGTGGAGCACAACCCGAATAGAGAAATTATAGATTTTACGAGGGAAAT
GACAAAAAATGTGGAAGGAACTGACAAGGAAGAAATGGATTATATGGTTGAGAAGGAAATGGAAAAACATGTGGATGGAAGTGATAAGGAAGAAATAGCATCTATGGAAG
GCACTGACCAAAACCATCTGGAAGTTGTAGAGGAAGATCCATTTGAGTATTGTGATGAAGAATGGGATGGAGATGAGTCAGAAGATGATGGTCACGATGATAACGACAAA
GATGTCGGGGTACAAGTACAAATGAGACTTCTAAAGAGAATGAAGTTCAATCTGGCAATGTCGAATGTGACTCTGAAGATGATTATGAAGAAGGAGAAGATTCTAGCGAT
GAGGGTTCTGTGGAGGGAATGA
mRNA sequenceShow/hide mRNA sequence
ATGGTTGGAGTTCCGGTGGCGATGGACGTCGGATCGGGATTGGATTTGTGGCAGAGTTCGTCGGAGTGGCGGCGGCGTAGGTCTTCAACGGCGGCGACAATGTGGTCTAG
GCGTTTCACCATTACATTTCACTACAATGGGAGAATACAATATAATCCTAGGGTTGAGTATTTTGGGGGAAAGGTATCTGTGGTGAAAGACGTAGAACCCAGTGGCCTAA
CGATCCTAGATTTATCTGTCCTCACAGCATACCTAGGTGTATGTAATGCTGCTTGGTTTGGTTACGTGGTGCCAGGGAAAACATTGAGTACGGGATATAAGGGGATTCTG
ACCGATGACGATATTTTGGATATGGTTGAGATGCTCCCAGAGGATAGGATGATCCATATGTATGTGGAGCACAACCCGAATAGAGAAATTATAGATTTTACGAGGGAAAT
GACAAAAAATGTGGAAGGAACTGACAAGGAAGAAATGGATTATATGGTTGAGAAGGAAATGGAAAAACATGTGGATGGAAGTGATAAGGAAGAAATAGCATCTATGGAAG
GCACTGACCAAAACCATCTGGAAGTTGTAGAGGAAGATCCATTTGAGTATTGTGATGAAGAATGGGATGGAGATGAGTCAGAAGATGATGGTCACGATGATAACGACAAA
GATGTCGGGGTACAAGTACAAATGAGACTTCTAAAGAGAATGAAGTTCAATCTGGCAATGTCGAATGTGACTCTGAAGATGATTATGAAGAAGGAGAAGATTCTAGCGAT
GAGGGTTCTGTGGAGGGAATGA
Protein sequenceShow/hide protein sequence
MVGVPVAMDVGSGLDLWQSSSEWRRRRSSTAATMWSRRFTITFHYNGRIQYNPRVEYFGGKVSVVKDVEPSGLTILDLSVLTAYLGVCNAAWFGYVVPGKTLSTGYKGIL
TDDDILDMVEMLPEDRMIHMYVEHNPNREIIDFTREMTKNVEGTDKEEMDYMVEKEMEKHVDGSDKEEIASMEGTDQNHLEVVEEDPFEYCDEEWDGDESEDDGHDDNDK
DVGVQVQMRLLKRMKFNLAMSNVTLKMIMKKEKILAMRVLWRE