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Lag0017775 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0017775
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRibonuclease H
Genome locationchr5:8567663..8568438
RNA-Seq ExpressionLag0017775
SyntenyLag0017775
Gene Ontology termsNA
InterPro domainsIPR021109 - Aspartic peptidase domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022146774.1 uncharacterized protein LOC111015901 [Momordica charantia]1.3e-2859.62Show/hide
Query:  LEFTQAEAASIHQPHNDALVVTLIVANVKIHRILIDGGSSADVFSLAAFKAMQLERELLKPSLTPLVGFGGERVTPEGSIELPVTFGDGQNVVTKMINFL
        +EF++ EA  +  PHNDALV+TL +AN K+HRIL+DGGSS D+ SL A+KAM L  E+LK SLTPL+GFGGER+ P+G IELP+TF      +T+M++FL
Subjt:  LEFTQAEAASIHQPHNDALVVTLIVANVKIHRILIDGGSSADVFSLAAFKAMQLERELLKPSLTPLVGFGGERVTPEGSIELPVTFGDGQNVVTKMINFL

Query:  VVDF
        VVD+
Subjt:  VVDF
XP_022154102.1 uncharacterized protein LOC111021438 [Momordica charantia]4.8e-2861.54Show/hide
Query:  LEFTQAEAASIHQPHNDALVVTLIVANVKIHRILIDGGSSADVFSLAAFKAMQLERELLKPSLTPLVGFGGERVTPEGSIELPVTFGDGQNVVTKMINFL
        +EF++     +  PHNDAL++TL +AN K+HRIL+DGGSSAD  SL A+KAM L +E LK SLTPL+GFGGERV P G IELPVTF  G   +TKM++FL
Subjt:  LEFTQAEAASIHQPHNDALVVTLIVANVKIHRILIDGGSSADVFSLAAFKAMQLERELLKPSLTPLVGFGGERVTPEGSIELPVTFGDGQNVVTKMINFL

Query:  VVDF
        VVD+
Subjt:  VVDF
XP_022155186.1 uncharacterized protein LOC111022321 [Momordica charantia]1.3e-2850Show/hide
Query:  RRFEQEEESYCQGSKVRTRISRYVLCPSSKGNPSLEFTQAEAASIHQPHNDALVVTLIVANVKIHRILIDGGSSADVFSLAAFKAMQLERELLKPSLTPL
        R  E++ ++Y + ++   + +       +    ++EF++ EA  +  PHNDALV+TL +ANVK+HRIL+DGGSSAD+ S  A+KAM L  ++LK S  PL
Subjt:  RRFEQEEESYCQGSKVRTRISRYVLCPSSKGNPSLEFTQAEAASIHQPHNDALVVTLIVANVKIHRILIDGGSSADVFSLAAFKAMQLERELLKPSLTPL

Query:  VGFGGERVTPEGSIELPVTFGDGQNVVTKMINFLVVDF
        VGFGGERV  EG IELPVTFG G   VTKM++FLVV++
Subjt:  VGFGGERVTPEGSIELPVTFGDGQNVVTKMINFLVVDF
XP_022156748.1 uncharacterized protein LOC111023587 [Momordica charantia]9.7e-2962.86Show/hide
Query:  SLEFTQAEAASIHQPHNDALVVTLIVANVKIHRILIDGGSSADVFSLAAFKAMQLERELLKPSLTPLVGFGGERVTPEGSIELPVTFGDGQNVVTKMINF
        ++EF++ EA  +   HNDALV+TL +ANVK+HRIL+DGGSSAD+ S  A+KAM LE ++LK S  PLVGFGGERV  EG IELPVTFG G   VTKM++F
Subjt:  SLEFTQAEAASIHQPHNDALVVTLIVANVKIHRILIDGGSSADVFSLAAFKAMQLERELLKPSLTPLVGFGGERVTPEGSIELPVTFGDGQNVVTKMINF

Query:  LVVDF
        LVV++
Subjt:  LVVDF
XP_022158687.1 uncharacterized protein LOC111025147 [Momordica charantia]7.0e-2760Show/hide
Query:  SLEFTQAEAASIHQPHNDALVVTLIVANVKIHRILIDGGSSADVFSLAAFKAMQLERELLKPSLTPLVGFGGERVTPEGSIELPVTFGDGQNVVTKMINF
        ++EF++ EA  +  PHNDALV+TL +ANVK+HRIL+DGGSSAD+ S   +K M L  ++LK S  PL+GFG ERV PEG IEL VTFG G   VTKM++F
Subjt:  SLEFTQAEAASIHQPHNDALVVTLIVANVKIHRILIDGGSSADVFSLAAFKAMQLERELLKPSLTPLVGFGGERVTPEGSIELPVTFGDGQNVVTKMINF

Query:  LVVDF
        LVVD+
Subjt:  LVVDF
TrEMBL top hitse value%identityAlignment
A0A6J1CZ14 uncharacterized protein LOC1110159016.2e-2959.62Show/hide
Query:  LEFTQAEAASIHQPHNDALVVTLIVANVKIHRILIDGGSSADVFSLAAFKAMQLERELLKPSLTPLVGFGGERVTPEGSIELPVTFGDGQNVVTKMINFL
        +EF++ EA  +  PHNDALV+TL +AN K+HRIL+DGGSS D+ SL A+KAM L  E+LK SLTPL+GFGGER+ P+G IELP+TF      +T+M++FL
Subjt:  LEFTQAEAASIHQPHNDALVVTLIVANVKIHRILIDGGSSADVFSLAAFKAMQLERELLKPSLTPLVGFGGERVTPEGSIELPVTFGDGQNVVTKMINFL

Query:  VVDF
        VVD+
Subjt:  VVDF
A0A6J1DKR9 uncharacterized protein LOC1110214382.3e-2861.54Show/hide
Query:  LEFTQAEAASIHQPHNDALVVTLIVANVKIHRILIDGGSSADVFSLAAFKAMQLERELLKPSLTPLVGFGGERVTPEGSIELPVTFGDGQNVVTKMINFL
        +EF++     +  PHNDAL++TL +AN K+HRIL+DGGSSAD  SL A+KAM L +E LK SLTPL+GFGGERV P G IELPVTF  G   +TKM++FL
Subjt:  LEFTQAEAASIHQPHNDALVVTLIVANVKIHRILIDGGSSADVFSLAAFKAMQLERELLKPSLTPLVGFGGERVTPEGSIELPVTFGDGQNVVTKMINFL

Query:  VVDF
        VVD+
Subjt:  VVDF
A0A6J1DQY2 uncharacterized protein LOC1110223216.2e-2950Show/hide
Query:  RRFEQEEESYCQGSKVRTRISRYVLCPSSKGNPSLEFTQAEAASIHQPHNDALVVTLIVANVKIHRILIDGGSSADVFSLAAFKAMQLERELLKPSLTPL
        R  E++ ++Y + ++   + +       +    ++EF++ EA  +  PHNDALV+TL +ANVK+HRIL+DGGSSAD+ S  A+KAM L  ++LK S  PL
Subjt:  RRFEQEEESYCQGSKVRTRISRYVLCPSSKGNPSLEFTQAEAASIHQPHNDALVVTLIVANVKIHRILIDGGSSADVFSLAAFKAMQLERELLKPSLTPL

Query:  VGFGGERVTPEGSIELPVTFGDGQNVVTKMINFLVVDF
        VGFGGERV  EG IELPVTFG G   VTKM++FLVV++
Subjt:  VGFGGERVTPEGSIELPVTFGDGQNVVTKMINFLVVDF
A0A6J1DRG9 uncharacterized protein LOC1110235874.7e-2962.86Show/hide
Query:  SLEFTQAEAASIHQPHNDALVVTLIVANVKIHRILIDGGSSADVFSLAAFKAMQLERELLKPSLTPLVGFGGERVTPEGSIELPVTFGDGQNVVTKMINF
        ++EF++ EA  +   HNDALV+TL +ANVK+HRIL+DGGSSAD+ S  A+KAM LE ++LK S  PLVGFGGERV  EG IELPVTFG G   VTKM++F
Subjt:  SLEFTQAEAASIHQPHNDALVVTLIVANVKIHRILIDGGSSADVFSLAAFKAMQLERELLKPSLTPLVGFGGERVTPEGSIELPVTFGDGQNVVTKMINF

Query:  LVVDF
        LVV++
Subjt:  LVVDF
A0A6J1DXV4 uncharacterized protein LOC1110251473.4e-2760Show/hide
Query:  SLEFTQAEAASIHQPHNDALVVTLIVANVKIHRILIDGGSSADVFSLAAFKAMQLERELLKPSLTPLVGFGGERVTPEGSIELPVTFGDGQNVVTKMINF
        ++EF++ EA  +  PHNDALV+TL +ANVK+HRIL+DGGSSAD+ S   +K M L  ++LK S  PL+GFG ERV PEG IEL VTFG G   VTKM++F
Subjt:  SLEFTQAEAASIHQPHNDALVVTLIVANVKIHRILIDGGSSADVFSLAAFKAMQLERELLKPSLTPLVGFGGERVTPEGSIELPVTFGDGQNVVTKMINF

Query:  LVVDF
        LVVD+
Subjt:  LVVDF
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTCGAGGCTGAGCCTGACCAAAGATGGCCAAGACAAAGAAGAACCCCTACGAGAGATCAGAACCATCTTTGGAGGACCAGCTGTAGGAGGTTCGAGCAGGAAGAGGA
AAGCTATTGCCAGGGAAGCAAGGTCCGAACCAGAATATCGAGGTATGTACTCTGTCCATCTAGCAAAGGCAACCCCTCTTTGGAGTTCACTCAGGCTGAGGCAGCAAGCA
TTCATCAGCCACATAATGATGCCCTAGTGGTCACTCTGATTGTAGCCAATGTGAAAATCCATCGGATCCTAATTGATGGAGGAAGCTCGGCTGATGTCTTTTCTCTAGCA
GCCTTTAAAGCAATGCAGTTAGAGAGGGAACTCTTAAAGCCAAGTCTTACCCCACTTGTAGGATTTGGAGGAGAGAGAGTGACCCCAGAAGGTAGCATAGAACTTCCTGT
GACCTTTGGGGATGGACAGAATGTAGTGACAAAGATGATAAACTTCCTAGTTGTGGATTTTAAGCCACAGAGGCCCGAGGCCGACCAGGCCAAGGCCGACCAGAGGATAG
GCCGAGGCCGAGCAGCACACACTTCCACCAACACTGAATCTGAACTTATGGAGTTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGTCGAGGCTGAGCCTGACCAAAGATGGCCAAGACAAAGAAGAACCCCTACGAGAGATCAGAACCATCTTTGGAGGACCAGCTGTAGGAGGTTCGAGCAGGAAGAGGA
AAGCTATTGCCAGGGAAGCAAGGTCCGAACCAGAATATCGAGGTATGTACTCTGTCCATCTAGCAAAGGCAACCCCTCTTTGGAGTTCACTCAGGCTGAGGCAGCAAGCA
TTCATCAGCCACATAATGATGCCCTAGTGGTCACTCTGATTGTAGCCAATGTGAAAATCCATCGGATCCTAATTGATGGAGGAAGCTCGGCTGATGTCTTTTCTCTAGCA
GCCTTTAAAGCAATGCAGTTAGAGAGGGAACTCTTAAAGCCAAGTCTTACCCCACTTGTAGGATTTGGAGGAGAGAGAGTGACCCCAGAAGGTAGCATAGAACTTCCTGT
GACCTTTGGGGATGGACAGAATGTAGTGACAAAGATGATAAACTTCCTAGTTGTGGATTTTAAGCCACAGAGGCCCGAGGCCGACCAGGCCAAGGCCGACCAGAGGATAG
GCCGAGGCCGAGCAGCACACACTTCCACCAACACTGAATCTGAACTTATGGAGTTTTAG
Protein sequenceShow/hide protein sequence
MVEAEPDQRWPRQRRTPTRDQNHLWRTSCRRFEQEEESYCQGSKVRTRISRYVLCPSSKGNPSLEFTQAEAASIHQPHNDALVVTLIVANVKIHRILIDGGSSADVFSLA
AFKAMQLERELLKPSLTPLVGFGGERVTPEGSIELPVTFGDGQNVVTKMINFLVVDFKPQRPEADQAKADQRIGRGRAAHTSTNTESELMEF