; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0017780 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0017780
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase
Genome locationchr5:8646134..8649895
RNA-Seq ExpressionLag0017780
SyntenyLag0017780
Gene Ontology termsNA
InterPro domainsIPR005162 - Retrotransposon gag domain
IPR021109 - Aspartic peptidase domain superfamily
IPR043502 - DNA/RNA polymerase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
PIN20438.1 DNA-directed DNA polymerase [Handroanthus impetiginosus]1.5e-12740.63Show/hide
Query:  WLNSFAPGSIRTWDELAEKFLSKYFPPNRNAKLRSEIVGFRQLE-------------------DETFSEAWERFKELLRSVPTMGYLIVFKWKHFTMSSA
        W  S    S+  W EL E+F+SK+F P + A +R+EI+ FRQ+                    D   S        LL +     Y    K +  T   A
Subjt:  WLNSFAPGSIRTWDELAEKFLSKYFPPNRNAKLRSEIVGFRQLE-------------------DETFSEAWERFKELLRSVPTMGYLIVFKWKHFTMSSA

Query:  ATSMEPAAV------------------VNQV--TDEACVYCG------------------------------------WRNHPNFSWGG-----------
        A  +E   V                  +NQV  T   C   G                                    WR HPNFSW             
Subjt:  ATSMEPAAV------------------VNQV--TDEACVYCG------------------------------------WRNHPNFSWGG-----------

Query:  QGNNVQAQQKMNQPDLLK-------------------------RRQGLKETSFDTEHPRREGKEQGAGGSKENAGASGSVPDVEPPYVPPPPYVPPLPFP
        QG   Q QQ M +  L++                         R QG   ++ +  +PR++G E      KE         ++E P     P     PFP
Subjt:  QGNNVQAQQKMNQPDLLK-------------------------RRQGLKETSFDTEHPRREGKEQGAGGSKENAGASGSVPDVEPPYVPPPPYVPPLPFP

Query:  QRQKPKNQDGQFKKFLEILKQLHINIPLVEAIEQMPNYAKFLKDILTKKKRLGEFETVSLTEECSAILKNGLPPKAKDPGSFTIPVSIGGKELGRALCDL
        QR + +  + QF KFLE+ K+LHINIP  EA+EQMP+Y KF+KDIL+KK+RLG++ETV LTEECSAI++N LPPK KDPGSFTIP +IG    GRALCDL
Subjt:  QRQKPKNQDGQFKKFLEILKQLHINIPLVEAIEQMPNYAKFLKDILTKKKRLGEFETVSLTEECSAILKNGLPPKAKDPGSFTIPVSIGGKELGRALCDL

Query:  GASINLMPLSVYRKLGIGEARPTTVTLQLADRSITYPEGKIEDVLVKVDKFIFPVDFIILDYEADKDVPIILGRPFLATGRALIDVQKGELTMRVCNEEV
         ASINLMP S+YR LG+GEA+PT++TLQLADRS+TYP+G IED+LVKVDKFIFP DF++LD E D +VPIILGRPFLATGR LIDVQKGELTMRV ++++
Subjt:  GASINLMPLSVYRKLGIGEARPTTVTLQLADRSITYPEGKIEDVLVKVDKFIFPVDFIILDYEADKDVPIILGRPFLATGRALIDVQKGELTMRVCNEEV

Query:  KFNVFKAMKYPDEMEDCSFIRILESTV------------IETAIQDSADKHSEKHGE-------------------------------------------
         FNVFKAMK+P+E ++C  + + ++              +E A+ D  D+ +E+  E                                           
Subjt:  KFNVFKAMKYPDEMEDCSFIRILESTV------------IETAIQDSADKHSEKHGE-------------------------------------------

Query:  ------------------------------------QYRKAIGWTLADIQGISPSFCMHKITLEEGSFRSIEQQRRLNPAMKEVVKKEVIKWLDAGIIYP
                                             ++ AIGWT+ADI+GISPSFCMHKI LE+    S+E QRRLNP MKEVVKKE+IKWLDAGIIYP
Subjt:  ------------------------------------QYRKAIGWTLADIQGISPSFCMHKITLEEGSFRSIEQQRRLNPAMKEVVKKEVIKWLDAGIIYP

Query:  IADSNWVSPVQCVPKKGGVTVVSNKDNELIP
        I+DS+WVSPVQC+PKKGG TVV N  NELIP
Subjt:  IADSNWVSPVQCVPKKGGVTVVSNKDNELIP

PIN21854.1 DNA-directed DNA polymerase [Handroanthus impetiginosus]7.4e-12740.19Show/hide
Query:  WLNSFAPGSIRTWDELAEKFLSKYFPPNRNAKLRSEIVGFRQLEDETFSEAWERFKELLRSVPT------------------------------------
        W  S    SI TW +L E+F+SK+F P + A LR+EI+ FRQ   ET  EAW RF+++LR+ P                                     
Subjt:  WLNSFAPGSIRTWDELAEKFLSKYFPPNRNAKLRSEIVGFRQLEDETFSEAWERFKELLRSVPT------------------------------------

Query:  -------MGYLIVFKWKHFTMSSAATSMEPAAV--VNQVT-----------------------DEACVYC------------------------GWRNHP
               +  L+V  ++    S  AT  + A V  V+QVT                        + C +                         GWR HP
Subjt:  -------MGYLIVFKWKHFTMSSAATSMEPAAV--VNQVT-----------------------DEACVYC------------------------GWRNHP

Query:  NFSWG---GQGNNVQAQQKMNQPDLLKRRQGLK----ETSFDTEHPRREGKEQGAGGSKENAGASGSVPDVEPPYVPPPPYVPPLPFPQRQKPKNQDGQF
        NFSW    GQG+  + QQ          RQ  K      +       +E  ++     ++   +     +VE P     P     PFPQR + +    QF
Subjt:  NFSWG---GQGNNVQAQQKMNQPDLLKRRQGLK----ETSFDTEHPRREGKEQGAGGSKENAGASGSVPDVEPPYVPPPPYVPPLPFPQRQKPKNQDGQF

Query:  KKFLEILKQLHINIPLVEAIEQMPNYAKFLKDILTKKKRLGEFETVSLTEECSAILKNGLPPKAKDPGSFTIPVSIGGKELGRALCDLGASINLMPLSVY
         KFLE+ K+LHINIP  EA+EQMP+Y KF+KDIL+KK+RLG++ETV+LTEECSAI++N LPPK KDPG              RALCDLGASINLMP S+Y
Subjt:  KKFLEILKQLHINIPLVEAIEQMPNYAKFLKDILTKKKRLGEFETVSLTEECSAILKNGLPPKAKDPGSFTIPVSIGGKELGRALCDLGASINLMPLSVY

Query:  RKLGIGEARPTTVTLQLADRSITYPEGKIEDVLVKVDKFIFPVDFIILDYEADKDVPIILGRPFLATGRALIDVQKGELTMRVCNEEVKFNVFKAMKYPD
        R LG+ EA+PT++TLQLADRS+TYP+G IED+LVKVDKFIFP DF++LD E D +VPIILGRPFLATGR LIDVQKGELTMRV ++++ FNVFKAMK+P+
Subjt:  RKLGIGEARPTTVTLQLADRSITYPEGKIEDVLVKVDKFIFPVDFIILDYEADKDVPIILGRPFLATGRALIDVQKGELTMRVCNEEVKFNVFKAMKYPD

Query:  EMEDCSFIRILESTV------------IETAIQDSADKHSEKHGE-------------------------------------------------------
        E ++C  + + ++              +E A+ D  D+ +E+  E                                                       
Subjt:  EMEDCSFIRILESTV------------IETAIQDSADKHSEKHGE-------------------------------------------------------

Query:  ------------------------QYRKAIGWTLADIQGISPSFCMHKITLEEGSFRSIEQQRRLNPAMKEVVKKEVIKWLDAGIIYPIADSNWVSPVQC
                                 ++ AIGWT+ADI+GISPSFCMHKI LE+    S+E QRRLNP MKEVVKKE+IKWLDAGIIYPI+D +W+SPVQC
Subjt:  ------------------------QYRKAIGWTLADIQGISPSFCMHKITLEEGSFRSIEQQRRLNPAMKEVVKKEVIKWLDAGIIYPIADSNWVSPVQC

Query:  VPKKGGVTVVSNKDNELIP
        VPKKGG+TVV N  NE IP
Subjt:  VPKKGGVTVVSNKDNELIP

XP_017227899.1 PREDICTED: uncharacterized protein LOC108203467 [Daucus carota subsp. sativus]6.5e-13156.8Show/hide
Query:  KENAGASGSVPDVEPPYVPPPPYVPPLPFPQRQKPKNQDGQFKKFLEILKQLHINIPLVEAIEQMPNYAKFLKDILTKKKRLGEFETVSLTEECSAILKN
        +EN   S     +E  ++ P P     PFPQR + + QD QFKKFL++LKQLHINIPLVEA+EQMPNY KF+KDILTKK+RLGEFETV+LT+ECS+ L++
Subjt:  KENAGASGSVPDVEPPYVPPPPYVPPLPFPQRQKPKNQDGQFKKFLEILKQLHINIPLVEAIEQMPNYAKFLKDILTKKKRLGEFETVSLTEECSAILKN

Query:  GLPPKAKDPGSFTIPVSIGGKELGRALCDLGASINLMPLSVYRKLGIGEARPTTVTLQLADRSITYPEGKIEDVLVKVDKFIFPVDFIILDYEADKDVPI
         LP K KDPGSFTIP +IG    G ALCDLGASINLMP+SV+RKLGIGE RPTTVTLQLADRS+ +PEGKIEDVLVKVDKFIFP DFI+LDYEAD++VPI
Subjt:  GLPPKAKDPGSFTIPVSIGGKELGRALCDLGASINLMPLSVYRKLGIGEARPTTVTLQLADRSITYPEGKIEDVLVKVDKFIFPVDFIILDYEADKDVPI

Query:  ILGRPFLATGRALIDVQKGELTMRVCNEEVKFNVFKAMKYPDEMEDCSFIRI-----------------LESTVIETAIQD-------------------
        ILGRPFLATGR LIDVQ GELTMRV +E+V FNVFKAMKY D++EDCS I I                 LE  ++  + ++                   
Subjt:  ILGRPFLATGRALIDVQKGELTMRVCNEEVKFNVFKAMKYPDEMEDCSFIRI-----------------LESTVIETAIQD-------------------

Query:  -------------------SADKHSE----------KHG----------------------------EQYRKAIGWTLADIQGISPSFCMHKITLEEGSF
                           S D+  E          K+                             + +RKAIGW++ADI+GISPS CMHKI LE+G+ 
Subjt:  -------------------SADKHSE----------KHG----------------------------EQYRKAIGWTLADIQGISPSFCMHKITLEEGSF

Query:  RSIEQQRRLNPAMKEVVKKEVIKWLDAGIIYPIADSNWVSPVQCVPKKGGVTVVSNKDNELIP
         SIE QRRLNP MKEVVKKEVIKWLDAGIIYPI+DS WVSPVQCVPKKGG+TV+ N++NELIP
Subjt:  RSIEQQRRLNPAMKEVVKKEVIKWLDAGIIYPIADSNWVSPVQCVPKKGGVTVVSNKDNELIP

XP_017239676.1 PREDICTED: uncharacterized protein LOC108212460 [Daucus carota subsp. sativus]7.4e-12734.58Show/hide
Query:  RTRAIRAYVVPMFNELNPEIARPQIQAANFEMKPVMFQ---------------------MLQTVGN---------SMRW----------SKSWLNSFAPG
        R   ++ Y++P F+ ++  IARP I A NF +     Q                      L+ V N         ++R           ++ WL+S    
Subjt:  RTRAIRAYVVPMFNELNPEIARPQIQAANFEMKPVMFQ---------------------MLQTVGN---------SMRW----------SKSWLNSFAPG

Query:  SIRTWDELAEKFLSKYFPPNRNAKLRSEIVGFRQLEDETFSEAWERFKELLRSVPTMGYLIVFKWKHF---TMSSAATSMEPAA--------------VV
        SI TW++L EKFL+KYF P +  +L  EI  F+Q + E+  EA+ERFK+LLR  P  G     K + F        AT ++ AA              ++
Subjt:  SIRTWDELAEKFLSKYFPPNRNAKLRSEIVGFRQLEDETFSEAWERFKELLRSVPTMGYLIVFKWKHF---TMSSAATSMEPAA--------------VV

Query:  NQVTDEAC-----------------------------------------------------------VYC------------------------------
          +T   C                                                           V+C                              
Subjt:  NQVTDEAC-----------------------------------------------------------VYC------------------------------

Query:  ---------------GWRNHPNFSWGGQGNNV---------------------QAQQKMNQPDLLKRRQGLKETSFDTEHPRREGKEQGAG--GSKENAG
                       GWRNHPNFSW    NNV                     + ++K N  DLL +     +    ++       E   G   S  N  
Subjt:  ---------------GWRNHPNFSWGGQGNNV---------------------QAQQKMNQPDLLKRRQGLKETSFDTEHPRREGKEQGAG--GSKENAG

Query:  ASGSVPDVEPP----------------------------------------------------YVPPPPYVPPLPFPQRQKPKNQDGQFKKFLEILKQLH
         SGS+P    P                                                      P     PP PFPQR + + QD QF+KF+++ K+L 
Subjt:  ASGSVPDVEPP----------------------------------------------------YVPPPPYVPPLPFPQRQKPKNQDGQFKKFLEILKQLH

Query:  INIPLVEAIEQMPNYAKFLKDILTKKKRLGEFETVSLTEECSAILKNGLPPKAKDPGSFTIPVSIGGKELGRALCDLGASINLMPLSVYRKLGIGEARPT
        INIP  EA+EQM +Y KF+KDIL++K+RL EFETV+LTEECSAIL+  LPPK KDPGSFTIP +IG +  G+ALCDLGAS+NLMPLS++ KLG+GE +PT
Subjt:  INIPLVEAIEQMPNYAKFLKDILTKKKRLGEFETVSLTEECSAILKNGLPPKAKDPGSFTIPVSIGGKELGRALCDLGASINLMPLSVYRKLGIGEARPT

Query:  TVTLQLADRSITYPEGKIEDVLVKVDKFIFPVDFIILDYEADKDVPIILGRPFLATGRALIDVQKGELTMRVCNEEVKFNVFKAMKYPDEMEDCSFIRIL
        +V LQLADRS+ YP G +EDVLVKVDKFIFP DFI+LD E D D+P++LGRPFLATGR LIDVQKGELTMRV +E+V FNVF AMK+ ++ E C  +   
Subjt:  TVTLQLADRSITYPEGKIEDVLVKVDKFIFPVDFIILDYEADKDVPIILGRPFLATGRALIDVQKGELTMRVCNEEVKFNVFKAMKYPDEMEDCSFIRIL

Query:  -------------ESTVIETAIQDSADKHSEKHGE-----------------------------------------------------------------
                      +  +E +++++ D+ +E+  E                                                                 
Subjt:  -------------ESTVIETAIQDSADKHSEKHGE-----------------------------------------------------------------

Query:  ----------------QYRKAIGWTLADIQGISPSFCMHKITLEEGSFRSIEQQRRLNPAMKEVVKKEVIKWLDAGIIYPIADSNWVSPVQCVPKKGGVT
                        +Y++AIGW +ADI+GISPSFCMHKI++E+    +IE QRRLNP MKEVVKKE+IKWLDAGIIYPI+DS+WVSP+QCVPKKGG+T
Subjt:  ----------------QYRKAIGWTLADIQGISPSFCMHKITLEEGSFRSIEQQRRLNPAMKEVVKKEVIKWLDAGIIYPIADSNWVSPVQCVPKKGGVT

Query:  VVSNKDNELIP
        VV+N+ NELIP
Subjt:  VVSNKDNELIP

XP_022156989.1 uncharacterized protein LOC111023818 [Momordica charantia]4.9e-13161.69Show/hide
Query:  VPPPPYVPPLPFPQRQKPKNQDGQFKKFLEILKQLHINIPLVEAIEQMPNYAKFLKDILTKKKRLGEFETVSLTEECSAILKNGLPPKAKDPGSFTIPVS
        +P    VPP P+PQR + KNQD QF +FLE+LKQLHINIPL+EA+EQMPNY KFLKDIL KK+RLGEFE V+LT+E SAIL   LP K  DPGSFTIPV 
Subjt:  VPPPPYVPPLPFPQRQKPKNQDGQFKKFLEILKQLHINIPLVEAIEQMPNYAKFLKDILTKKKRLGEFETVSLTEECSAILKNGLPPKAKDPGSFTIPVS

Query:  IGGKELGRALCDLGASINLMPLSVYRKLGIGEARPTTVTLQLADRSITYPEGKIEDVLVKVDKFIFPVDFIILDYEADKDVPIILGRPFLATGRALIDVQ
        IGGK +G ALCDLGASINLMPLSVY+KLGIGEARP TVTLQLADRSITY EGKIEDVLV+VDKFIFP DFIILDYEADK++PIILGRPFL+TGRALIDV 
Subjt:  IGGKELGRALCDLGASINLMPLSVYRKLGIGEARPTTVTLQLADRSITYPEGKIEDVLVKVDKFIFPVDFIILDYEADKDVPIILGRPFLATGRALIDVQ

Query:  KGELTMRVCNEEVKFNVFKAMKYPDEMEDCSFIRILESTV------------------------IETAIQDS----------------------------
         GELT+RV +++V  ++F ++KYP ++E+CS++RI +  +                        ++  +Q S                            
Subjt:  KGELTMRVCNEEVKFNVFKAMKYPDEMEDCSFIRILESTV------------------------IETAIQDS----------------------------

Query:  ----ADKHSEKHG------EQYRKAIGWTLADIQGISPSFCMHKITLEEGSFRSIEQQRRLNPAMKEVVKKEVIKWLDAGIIYPIADSNWVSPVQCVPKK
            AD   EK          ++KAIGWTLADI+GISPS+CMHKI LEEG   SIE QRRLNPAMKEVVKKE+IKWLDAGIIYPIAD + +SPVQCVPKK
Subjt:  ----ADKHSEKHG------EQYRKAIGWTLADIQGISPSFCMHKITLEEGSFRSIEQQRRLNPAMKEVVKKEVIKWLDAGIIYPIADSNWVSPVQCVPKK

Query:  GGVTVVSNKDNELIP
        GG+TVV N +NELIP
Subjt:  GGVTVVSNKDNELIP

TrEMBL top hitse value%identityAlignment
A0A2G9HSD1 DNA-directed DNA polymerase7.2e-12840.63Show/hide
Query:  WLNSFAPGSIRTWDELAEKFLSKYFPPNRNAKLRSEIVGFRQLE-------------------DETFSEAWERFKELLRSVPTMGYLIVFKWKHFTMSSA
        W  S    S+  W EL E+F+SK+F P + A +R+EI+ FRQ+                    D   S        LL +     Y    K +  T   A
Subjt:  WLNSFAPGSIRTWDELAEKFLSKYFPPNRNAKLRSEIVGFRQLE-------------------DETFSEAWERFKELLRSVPTMGYLIVFKWKHFTMSSA

Query:  ATSMEPAAV------------------VNQV--TDEACVYCG------------------------------------WRNHPNFSWGG-----------
        A  +E   V                  +NQV  T   C   G                                    WR HPNFSW             
Subjt:  ATSMEPAAV------------------VNQV--TDEACVYCG------------------------------------WRNHPNFSWGG-----------

Query:  QGNNVQAQQKMNQPDLLK-------------------------RRQGLKETSFDTEHPRREGKEQGAGGSKENAGASGSVPDVEPPYVPPPPYVPPLPFP
        QG   Q QQ M +  L++                         R QG   ++ +  +PR++G E      KE         ++E P     P     PFP
Subjt:  QGNNVQAQQKMNQPDLLK-------------------------RRQGLKETSFDTEHPRREGKEQGAGGSKENAGASGSVPDVEPPYVPPPPYVPPLPFP

Query:  QRQKPKNQDGQFKKFLEILKQLHINIPLVEAIEQMPNYAKFLKDILTKKKRLGEFETVSLTEECSAILKNGLPPKAKDPGSFTIPVSIGGKELGRALCDL
        QR + +  + QF KFLE+ K+LHINIP  EA+EQMP+Y KF+KDIL+KK+RLG++ETV LTEECSAI++N LPPK KDPGSFTIP +IG    GRALCDL
Subjt:  QRQKPKNQDGQFKKFLEILKQLHINIPLVEAIEQMPNYAKFLKDILTKKKRLGEFETVSLTEECSAILKNGLPPKAKDPGSFTIPVSIGGKELGRALCDL

Query:  GASINLMPLSVYRKLGIGEARPTTVTLQLADRSITYPEGKIEDVLVKVDKFIFPVDFIILDYEADKDVPIILGRPFLATGRALIDVQKGELTMRVCNEEV
         ASINLMP S+YR LG+GEA+PT++TLQLADRS+TYP+G IED+LVKVDKFIFP DF++LD E D +VPIILGRPFLATGR LIDVQKGELTMRV ++++
Subjt:  GASINLMPLSVYRKLGIGEARPTTVTLQLADRSITYPEGKIEDVLVKVDKFIFPVDFIILDYEADKDVPIILGRPFLATGRALIDVQKGELTMRVCNEEV

Query:  KFNVFKAMKYPDEMEDCSFIRILESTV------------IETAIQDSADKHSEKHGE-------------------------------------------
         FNVFKAMK+P+E ++C  + + ++              +E A+ D  D+ +E+  E                                           
Subjt:  KFNVFKAMKYPDEMEDCSFIRILESTV------------IETAIQDSADKHSEKHGE-------------------------------------------

Query:  ------------------------------------QYRKAIGWTLADIQGISPSFCMHKITLEEGSFRSIEQQRRLNPAMKEVVKKEVIKWLDAGIIYP
                                             ++ AIGWT+ADI+GISPSFCMHKI LE+    S+E QRRLNP MKEVVKKE+IKWLDAGIIYP
Subjt:  ------------------------------------QYRKAIGWTLADIQGISPSFCMHKITLEEGSFRSIEQQRRLNPAMKEVVKKEVIKWLDAGIIYP

Query:  IADSNWVSPVQCVPKKGGVTVVSNKDNELIP
        I+DS+WVSPVQC+PKKGG TVV N  NELIP
Subjt:  IADSNWVSPVQCVPKKGGVTVVSNKDNELIP

A0A2G9HWF8 Reverse transcriptase3.6e-12740.19Show/hide
Query:  WLNSFAPGSIRTWDELAEKFLSKYFPPNRNAKLRSEIVGFRQLEDETFSEAWERFKELLRSVPT------------------------------------
        W  S    SI TW +L E+F+SK+F P + A LR+EI+ FRQ   ET  EAW RF+++LR+ P                                     
Subjt:  WLNSFAPGSIRTWDELAEKFLSKYFPPNRNAKLRSEIVGFRQLEDETFSEAWERFKELLRSVPT------------------------------------

Query:  -------MGYLIVFKWKHFTMSSAATSMEPAAV--VNQVT-----------------------DEACVYC------------------------GWRNHP
               +  L+V  ++    S  AT  + A V  V+QVT                        + C +                         GWR HP
Subjt:  -------MGYLIVFKWKHFTMSSAATSMEPAAV--VNQVT-----------------------DEACVYC------------------------GWRNHP

Query:  NFSWG---GQGNNVQAQQKMNQPDLLKRRQGLK----ETSFDTEHPRREGKEQGAGGSKENAGASGSVPDVEPPYVPPPPYVPPLPFPQRQKPKNQDGQF
        NFSW    GQG+  + QQ          RQ  K      +       +E  ++     ++   +     +VE P     P     PFPQR + +    QF
Subjt:  NFSWG---GQGNNVQAQQKMNQPDLLKRRQGLK----ETSFDTEHPRREGKEQGAGGSKENAGASGSVPDVEPPYVPPPPYVPPLPFPQRQKPKNQDGQF

Query:  KKFLEILKQLHINIPLVEAIEQMPNYAKFLKDILTKKKRLGEFETVSLTEECSAILKNGLPPKAKDPGSFTIPVSIGGKELGRALCDLGASINLMPLSVY
         KFLE+ K+LHINIP  EA+EQMP+Y KF+KDIL+KK+RLG++ETV+LTEECSAI++N LPPK KDPG              RALCDLGASINLMP S+Y
Subjt:  KKFLEILKQLHINIPLVEAIEQMPNYAKFLKDILTKKKRLGEFETVSLTEECSAILKNGLPPKAKDPGSFTIPVSIGGKELGRALCDLGASINLMPLSVY

Query:  RKLGIGEARPTTVTLQLADRSITYPEGKIEDVLVKVDKFIFPVDFIILDYEADKDVPIILGRPFLATGRALIDVQKGELTMRVCNEEVKFNVFKAMKYPD
        R LG+ EA+PT++TLQLADRS+TYP+G IED+LVKVDKFIFP DF++LD E D +VPIILGRPFLATGR LIDVQKGELTMRV ++++ FNVFKAMK+P+
Subjt:  RKLGIGEARPTTVTLQLADRSITYPEGKIEDVLVKVDKFIFPVDFIILDYEADKDVPIILGRPFLATGRALIDVQKGELTMRVCNEEVKFNVFKAMKYPD

Query:  EMEDCSFIRILESTV------------IETAIQDSADKHSEKHGE-------------------------------------------------------
        E ++C  + + ++              +E A+ D  D+ +E+  E                                                       
Subjt:  EMEDCSFIRILESTV------------IETAIQDSADKHSEKHGE-------------------------------------------------------

Query:  ------------------------QYRKAIGWTLADIQGISPSFCMHKITLEEGSFRSIEQQRRLNPAMKEVVKKEVIKWLDAGIIYPIADSNWVSPVQC
                                 ++ AIGWT+ADI+GISPSFCMHKI LE+    S+E QRRLNP MKEVVKKE+IKWLDAGIIYPI+D +W+SPVQC
Subjt:  ------------------------QYRKAIGWTLADIQGISPSFCMHKITLEEGSFRSIEQQRRLNPAMKEVVKKEVIKWLDAGIIYPIADSNWVSPVQC

Query:  VPKKGGVTVVSNKDNELIP
        VPKKGG+TVV N  NE IP
Subjt:  VPKKGGVTVVSNKDNELIP

A0A2G9HYA0 Reverse transcriptase3.0e-12646.37Show/hide
Query:  GWRNHPNFSWG---GQGNNVQ----AQQKMNQPDLLKRRQGLKET----------SFDT-------------------------EHPRREGKEQGAGGSK
        GWR HPNFSW    GQG+  +     QQ++ QP + +++  L+ET          +F T                          +PR++GK Q    + 
Subjt:  GWRNHPNFSWG---GQGNNVQ----AQQKMNQPDLLKRRQGLKET----------SFDT-------------------------EHPRREGKEQGAGGSK

Query:  ENAGASGSV------------------PDVEPPYVPPPPYVPPLPFPQRQKPKNQDGQFKKFLEILKQLHINIPLVEAIEQMPNYAKFLKDILTKKKRLG
         N      V                   +VE P     P     PFPQR + +  + QF KFLE+ K+LHINIP  EA+EQMP+Y KF+KDIL+KK+RLG
Subjt:  ENAGASGSV------------------PDVEPPYVPPPPYVPPLPFPQRQKPKNQDGQFKKFLEILKQLHINIPLVEAIEQMPNYAKFLKDILTKKKRLG

Query:  EFETVSLTEECSAILKNGLPPKAKDPGSFTIPVSIGGKELGRALCDLGASINLMPLSVYRKLGIGEARPTTVTLQLADRSITYPEGKIEDVLVKVDKFIF
        ++ETV+LTEECSAI++N LPPK KDPGSFTIP +IG    GRALCDLGASINLMP S+YR LG+GEA+PT++TLQLADRS+TYP+G IED+LVKVDKFIF
Subjt:  EFETVSLTEECSAILKNGLPPKAKDPGSFTIPVSIGGKELGRALCDLGASINLMPLSVYRKLGIGEARPTTVTLQLADRSITYPEGKIEDVLVKVDKFIF

Query:  PVDFIILDYEADKDVPIILGRPFLATGRALIDVQKGELTMRVCNEEVKFNVFKAMKYPDEMEDCSFIRILESTV------------IETAIQDSADKHSE
        P DF++LD E D +VPIILGRPFLATGR LIDVQKGELTMRV ++++ FNVFKAMK+P+E ++C  + + +               +E A+ D  D+ +E
Subjt:  PVDFIILDYEADKDVPIILGRPFLATGRALIDVQKGELTMRVCNEEVKFNVFKAMKYPDEMEDCSFIRILESTV------------IETAIQDSADKHSE

Query:  KHGE-------------------------------------------------------------------------------QYRKAIGWTLADIQGIS
        +  E                                                                                ++ AIGWT+ADI+GIS
Subjt:  KHGE-------------------------------------------------------------------------------QYRKAIGWTLADIQGIS

Query:  PSFCMHKITLEEGSFRSIEQQRRLNPAMKEVVKKEVIKWLDAGIIYPIADSNWVSPVQCVPKKGGVTVVSNKDNELIP
        PSFCMHKI LE+    S+E QRRLNP MKEVVKKE+IKWLDAGIIYPI+DS+WVSPVQCVPKKGG+TVV N  NELIP
Subjt:  PSFCMHKITLEEGSFRSIEQQRRLNPAMKEVVKKEVIKWLDAGIIYPIADSNWVSPVQCVPKKGGVTVVSNKDNELIP

A0A2G9HYD8 Reverse transcriptase6.3e-12445.58Show/hide
Query:  GWRNHPNFSWG---GQGNNVQAQQKMNQP---DLLKRRQGLKET----------SFDT-------------------------EHPRREGKEQGAGGSKE
        GWR HPNFSW    GQG+  + QQ   QP    + +++  L+ET          +F T                          +PR++GK Q    +  
Subjt:  GWRNHPNFSWG---GQGNNVQAQQKMNQP---DLLKRRQGLKET----------SFDT-------------------------EHPRREGKEQGAGGSKE

Query:  NAGASGSV------------------PDVEPPYVPPPPYVPPLPFPQRQKPKNQDGQFKKFLEILKQLHINIPLVEAIEQMPNYAKFLKDILTKKKRLGE
        N      V                   +VE P     P     PFPQ+ + +  + QF KFLE+ K+LHINIP  EA+EQMP+Y KF+KDIL+KK+RLG+
Subjt:  NAGASGSV------------------PDVEPPYVPPPPYVPPLPFPQRQKPKNQDGQFKKFLEILKQLHINIPLVEAIEQMPNYAKFLKDILTKKKRLGE

Query:  FETVSLTEECSAILKNGLPPKAKDPGSFTIPVSIGGKELGRALCDLGASINLMPLSVYRKLGIGEARPTTVTLQLADRSITYPEGKIEDVLVKVDKFIFP
        +ET +LTEEC+AI++N LPPK KDPGSFTIP +IG    GRALCDLGASINLMP S+YR LG+GEA+PT++TLQLADRS+TYP+G IED+LVKVDKFIFP
Subjt:  FETVSLTEECSAILKNGLPPKAKDPGSFTIPVSIGGKELGRALCDLGASINLMPLSVYRKLGIGEARPTTVTLQLADRSITYPEGKIEDVLVKVDKFIFP

Query:  VDFIILDYEADKDVPIILGRPFLATGRALIDVQKGELTMRVCNEEVKFNVFKAMKYPDEMEDCSFIRILESTV------------IETAIQDSADKHSEK
         DF++LD E D +VPIILGRPFLATGR LIDVQKGELTMRV ++++ FNVFKAMK+P+E ++C  + + ++              +E A+ D  ++ +E+
Subjt:  VDFIILDYEADKDVPIILGRPFLATGRALIDVQKGELTMRVCNEEVKFNVFKAMKYPDEMEDCSFIRILESTV------------IETAIQDSADKHSEK

Query:  HGE-------------------------------------------------------------------------------QYRKAIGWTLADIQGISP
          E                                                                                ++ AIGWT+ADI+GISP
Subjt:  HGE-------------------------------------------------------------------------------QYRKAIGWTLADIQGISP

Query:  SFCMHKITLEEGSFRSIEQQRRLNPAMKEVVKKEVIKWLDAGIIYPIADSNWVSPVQCVPKKGGVTVVSNKDNELIP
        SFCMHKI LE+    S+E QRRLN  MKEVVKKE+IKWLDAGIIYPI+DS+WVSPVQCVPKKGG+TVV N  NELIP
Subjt:  SFCMHKITLEEGSFRSIEQQRRLNPAMKEVVKKEVIKWLDAGIIYPIADSNWVSPVQCVPKKGGVTVVSNKDNELIP

A0A6J1DV77 uncharacterized protein LOC1110238182.4e-13161.69Show/hide
Query:  VPPPPYVPPLPFPQRQKPKNQDGQFKKFLEILKQLHINIPLVEAIEQMPNYAKFLKDILTKKKRLGEFETVSLTEECSAILKNGLPPKAKDPGSFTIPVS
        +P    VPP P+PQR + KNQD QF +FLE+LKQLHINIPL+EA+EQMPNY KFLKDIL KK+RLGEFE V+LT+E SAIL   LP K  DPGSFTIPV 
Subjt:  VPPPPYVPPLPFPQRQKPKNQDGQFKKFLEILKQLHINIPLVEAIEQMPNYAKFLKDILTKKKRLGEFETVSLTEECSAILKNGLPPKAKDPGSFTIPVS

Query:  IGGKELGRALCDLGASINLMPLSVYRKLGIGEARPTTVTLQLADRSITYPEGKIEDVLVKVDKFIFPVDFIILDYEADKDVPIILGRPFLATGRALIDVQ
        IGGK +G ALCDLGASINLMPLSVY+KLGIGEARP TVTLQLADRSITY EGKIEDVLV+VDKFIFP DFIILDYEADK++PIILGRPFL+TGRALIDV 
Subjt:  IGGKELGRALCDLGASINLMPLSVYRKLGIGEARPTTVTLQLADRSITYPEGKIEDVLVKVDKFIFPVDFIILDYEADKDVPIILGRPFLATGRALIDVQ

Query:  KGELTMRVCNEEVKFNVFKAMKYPDEMEDCSFIRILESTV------------------------IETAIQDS----------------------------
         GELT+RV +++V  ++F ++KYP ++E+CS++RI +  +                        ++  +Q S                            
Subjt:  KGELTMRVCNEEVKFNVFKAMKYPDEMEDCSFIRILESTV------------------------IETAIQDS----------------------------

Query:  ----ADKHSEKHG------EQYRKAIGWTLADIQGISPSFCMHKITLEEGSFRSIEQQRRLNPAMKEVVKKEVIKWLDAGIIYPIADSNWVSPVQCVPKK
            AD   EK          ++KAIGWTLADI+GISPS+CMHKI LEEG   SIE QRRLNPAMKEVVKKE+IKWLDAGIIYPIAD + +SPVQCVPKK
Subjt:  ----ADKHSEKHG------EQYRKAIGWTLADIQGISPSFCMHKITLEEGSFRSIEQQRRLNPAMKEVVKKEVIKWLDAGIIYPIADSNWVSPVQCVPKK

Query:  GGVTVVSNKDNELIP
        GG+TVV N +NELIP
Subjt:  GGVTVVSNKDNELIP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACAAGGCTGCTGTTCACCGGTGGCACGACGGAGAGATGGGTTGTTGTGGTCGGGCGACAGCCAACACAACGGAGAGATGGACGGAACGGCGGAGAGGGGCGGCGGCT
GACTCACTGGTCTTGTGAGGGAGAAAGAAAGTCGAGGACTCGAGGGAATTCTAGAGTATTTCATATCATATTTTTACTCACTCTAGGAACCCAACAAGTTTTTGGCGCCG
TTGCCGGGGACTTGAATAAGTTTTTATCTGATTTGTTTTGTGAACAGAAGGAGGGAGCAGCGCAGAAACCAGATGGAGAACGCCCGCAACTCCCGCAGGTTCCTGAAGGT
CCAGTAGCAGTGAACCCCCAGCAGAATCCGTTGCTGCAGCAAAACCCACTGTTTGAGCAAAATGAGCAGCGAAATAATCAGGCTGAGAATCCTATCTTGATAGCGAACGA
TAGGACCAGAGCCATTCGAGCATATGTTGTCCCGATGTTTAATGAGTTGAATCCAGAGATTGCACGTCCCCAAATCCAAGCGGCGAATTTTGAAATGAAACCGGTAATGT
TTCAGATGTTGCAAACCGTGGGCAATTCCATGAGATGGAGCAAATCATGGTTAAACTCTTTTGCTCCAGGATCAATTAGGACGTGGGATGAGTTAGCTGAAAAATTTTTG
AGTAAATATTTCCCACCTAATAGAAATGCTAAATTAAGGAGTGAAATAGTAGGGTTTAGGCAACTTGAAGATGAGACTTTTAGTGAGGCTTGGGAGAGGTTTAAGGAGCT
TTTGCGAAGTGTCCCCACCATGGGTTACCTCATTGTATTCAAATGGAAACATTTTACAATGTCATCAGCAGCCACCAGCATGGAGCCTGCAGCAGTGGTGAACCAAGTCA
CGGACGAAGCATGTGTCTATTGCGGTTGGCGCAACCACCCCAACTTCTCATGGGGAGGTCAAGGAAATAACGTACAAGCGCAACAGAAGATGAACCAGCCGGATTTGCTA
AAGCGCAGGCAAGGCCTCAAGGAAACTTCCTTCGATACTGAACACCCTCGAAGGGAAGGTAAGGAGCAGGGTGCTGGAGGCAGCAAAGAGAATGCTGGAGCATCTGGTTC
TGTGCCAGATGTAGAACCACCATATGTGCCGCCCCCACCTTATGTACCACCTCTACCTTTTCCACAAAGGCAAAAGCCTAAGAATCAGGATGGTCAATTTAAAAAGTTTT
TAGAGATTCTTAAGCAGTTGCATATAAATATCCCTTTAGTAGAAGCTATTGAGCAAATGCCTAATTATGCTAAATTTCTTAAGGATATTTTGACTAAAAAGAAAAGGTTA
GGTGAGTTCGAAACTGTATCTCTTACTGAGGAGTGTAGTGCTATTCTTAAGAATGGGCTACCCCCCAAGGCTAAGGATCCAGGGTCATTTACTATACCTGTGTCTATAGG
TGGAAAGGAGTTAGGTAGAGCACTCTGTGATTTAGGTGCAAGCATTAACCTTATGCCTCTTTCGGTCTATCGGAAGTTAGGTATTGGTGAAGCTAGACCTACCACAGTTA
CACTCCAATTAGCTGATAGGTCTATCACATATCCAGAGGGTAAAATTGAGGATGTCTTAGTAAAAGTTGATAAATTCATATTTCCTGTTGATTTTATTATTTTAGACTAT
GAGGCTGATAAAGATGTCCCAATTATTCTAGGTCGTCCATTTTTGGCTACTGGTAGGGCATTAATAGATGTTCAAAAAGGAGAATTAACAATGAGAGTCTGTAATGAGGA
AGTGAAATTTAATGTGTTTAAAGCCATGAAATATCCAGACGAAATGGAGGATTGCTCCTTCATTAGGATTCTGGAGAGCACAGTTATTGAGACAGCAATACAGGATTCGG
CTGATAAGCATTCGGAAAAGCATGGAGAGCAATACCGCAAAGCTATAGGTTGGACATTGGCTGATATTCAGGGAATTAGCCCATCTTTTTGTATGCACAAAATCACTCTA
GAGGAGGGATCCTTTAGGAGTATTGAGCAACAAAGAAGGCTTAACCCTGCAATGAAAGAGGTTGTTAAAAAGGAGGTAATTAAATGGTTGGATGCTGGGATCATTTATCC
AATTGCCGATAGCAATTGGGTAAGCCCTGTCCAATGTGTTCCTAAGAAAGGAGGTGTCACTGTGGTGAGCAATAAAGATAATGAGTTGATCCCACAAGGACAGTAA
mRNA sequenceShow/hide mRNA sequence
ATGACAAGGCTGCTGTTCACCGGTGGCACGACGGAGAGATGGGTTGTTGTGGTCGGGCGACAGCCAACACAACGGAGAGATGGACGGAACGGCGGAGAGGGGCGGCGGCT
GACTCACTGGTCTTGTGAGGGAGAAAGAAAGTCGAGGACTCGAGGGAATTCTAGAGTATTTCATATCATATTTTTACTCACTCTAGGAACCCAACAAGTTTTTGGCGCCG
TTGCCGGGGACTTGAATAAGTTTTTATCTGATTTGTTTTGTGAACAGAAGGAGGGAGCAGCGCAGAAACCAGATGGAGAACGCCCGCAACTCCCGCAGGTTCCTGAAGGT
CCAGTAGCAGTGAACCCCCAGCAGAATCCGTTGCTGCAGCAAAACCCACTGTTTGAGCAAAATGAGCAGCGAAATAATCAGGCTGAGAATCCTATCTTGATAGCGAACGA
TAGGACCAGAGCCATTCGAGCATATGTTGTCCCGATGTTTAATGAGTTGAATCCAGAGATTGCACGTCCCCAAATCCAAGCGGCGAATTTTGAAATGAAACCGGTAATGT
TTCAGATGTTGCAAACCGTGGGCAATTCCATGAGATGGAGCAAATCATGGTTAAACTCTTTTGCTCCAGGATCAATTAGGACGTGGGATGAGTTAGCTGAAAAATTTTTG
AGTAAATATTTCCCACCTAATAGAAATGCTAAATTAAGGAGTGAAATAGTAGGGTTTAGGCAACTTGAAGATGAGACTTTTAGTGAGGCTTGGGAGAGGTTTAAGGAGCT
TTTGCGAAGTGTCCCCACCATGGGTTACCTCATTGTATTCAAATGGAAACATTTTACAATGTCATCAGCAGCCACCAGCATGGAGCCTGCAGCAGTGGTGAACCAAGTCA
CGGACGAAGCATGTGTCTATTGCGGTTGGCGCAACCACCCCAACTTCTCATGGGGAGGTCAAGGAAATAACGTACAAGCGCAACAGAAGATGAACCAGCCGGATTTGCTA
AAGCGCAGGCAAGGCCTCAAGGAAACTTCCTTCGATACTGAACACCCTCGAAGGGAAGGTAAGGAGCAGGGTGCTGGAGGCAGCAAAGAGAATGCTGGAGCATCTGGTTC
TGTGCCAGATGTAGAACCACCATATGTGCCGCCCCCACCTTATGTACCACCTCTACCTTTTCCACAAAGGCAAAAGCCTAAGAATCAGGATGGTCAATTTAAAAAGTTTT
TAGAGATTCTTAAGCAGTTGCATATAAATATCCCTTTAGTAGAAGCTATTGAGCAAATGCCTAATTATGCTAAATTTCTTAAGGATATTTTGACTAAAAAGAAAAGGTTA
GGTGAGTTCGAAACTGTATCTCTTACTGAGGAGTGTAGTGCTATTCTTAAGAATGGGCTACCCCCCAAGGCTAAGGATCCAGGGTCATTTACTATACCTGTGTCTATAGG
TGGAAAGGAGTTAGGTAGAGCACTCTGTGATTTAGGTGCAAGCATTAACCTTATGCCTCTTTCGGTCTATCGGAAGTTAGGTATTGGTGAAGCTAGACCTACCACAGTTA
CACTCCAATTAGCTGATAGGTCTATCACATATCCAGAGGGTAAAATTGAGGATGTCTTAGTAAAAGTTGATAAATTCATATTTCCTGTTGATTTTATTATTTTAGACTAT
GAGGCTGATAAAGATGTCCCAATTATTCTAGGTCGTCCATTTTTGGCTACTGGTAGGGCATTAATAGATGTTCAAAAAGGAGAATTAACAATGAGAGTCTGTAATGAGGA
AGTGAAATTTAATGTGTTTAAAGCCATGAAATATCCAGACGAAATGGAGGATTGCTCCTTCATTAGGATTCTGGAGAGCACAGTTATTGAGACAGCAATACAGGATTCGG
CTGATAAGCATTCGGAAAAGCATGGAGAGCAATACCGCAAAGCTATAGGTTGGACATTGGCTGATATTCAGGGAATTAGCCCATCTTTTTGTATGCACAAAATCACTCTA
GAGGAGGGATCCTTTAGGAGTATTGAGCAACAAAGAAGGCTTAACCCTGCAATGAAAGAGGTTGTTAAAAAGGAGGTAATTAAATGGTTGGATGCTGGGATCATTTATCC
AATTGCCGATAGCAATTGGGTAAGCCCTGTCCAATGTGTTCCTAAGAAAGGAGGTGTCACTGTGGTGAGCAATAAAGATAATGAGTTGATCCCACAAGGACAGTAA
Protein sequenceShow/hide protein sequence
MTRLLFTGGTTERWVVVVGRQPTQRRDGRNGGEGRRLTHWSCEGERKSRTRGNSRVFHIIFLLTLGTQQVFGAVAGDLNKFLSDLFCEQKEGAAQKPDGERPQLPQVPEG
PVAVNPQQNPLLQQNPLFEQNEQRNNQAENPILIANDRTRAIRAYVVPMFNELNPEIARPQIQAANFEMKPVMFQMLQTVGNSMRWSKSWLNSFAPGSIRTWDELAEKFL
SKYFPPNRNAKLRSEIVGFRQLEDETFSEAWERFKELLRSVPTMGYLIVFKWKHFTMSSAATSMEPAAVVNQVTDEACVYCGWRNHPNFSWGGQGNNVQAQQKMNQPDLL
KRRQGLKETSFDTEHPRREGKEQGAGGSKENAGASGSVPDVEPPYVPPPPYVPPLPFPQRQKPKNQDGQFKKFLEILKQLHINIPLVEAIEQMPNYAKFLKDILTKKKRL
GEFETVSLTEECSAILKNGLPPKAKDPGSFTIPVSIGGKELGRALCDLGASINLMPLSVYRKLGIGEARPTTVTLQLADRSITYPEGKIEDVLVKVDKFIFPVDFIILDY
EADKDVPIILGRPFLATGRALIDVQKGELTMRVCNEEVKFNVFKAMKYPDEMEDCSFIRILESTVIETAIQDSADKHSEKHGEQYRKAIGWTLADIQGISPSFCMHKITL
EEGSFRSIEQQRRLNPAMKEVVKKEVIKWLDAGIIYPIADSNWVSPVQCVPKKGGVTVVSNKDNELIPQGQ