; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0017783 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0017783
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Description(-)-germacrene D synthase-like isoform X2
Genome locationchr5:8711146..8714673
RNA-Seq ExpressionLag0017783
SyntenyLag0017783
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0016102 - diterpenoid biosynthetic process (biological process)
GO:0005634 - nucleus (cellular component)
GO:0000287 - magnesium ion binding (molecular function)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
GO:0010333 - terpene synthase activity (molecular function)
GO:0043565 - sequence-specific DNA binding (molecular function)
InterPro domainsIPR001906 - Terpene synthase, N-terminal domain
IPR008930 - Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid
IPR008949 - Isoprenoid synthase domain superfamily
IPR036965 - Terpene synthase, N-terminal domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022143456.1 (-)-germacrene D synthase-like isoform X1 [Momordica charantia]3.7e-3572Show/hide
Query:  APGNNASFNDSVPRRSANFQPSSWGDYFLYYDSNHPEDEDMVREQLGKLKEEVRSMLAAAEKCSEKLSLIDSIQRLGLSYHFEDEINEILESMQKLCNV-
        AP N+ S ND V RRSANFQPS WGDYFL+   N   D DMV ++L KLKEEVRSMLAAAEKCS+KLSLIDSIQRLGLS+HFE+EINEILE MQ   ++ 
Subjt:  APGNNASFNDSVPRRSANFQPSSWGDYFLYYDSNHPEDEDMVREQLGKLKEEVRSMLAAAEKCSEKLSLIDSIQRLGLSYHFEDEINEILESMQKLCNV-

Query:  DNDEDIYTVALRFRLLRQQGYFVSC
        D+DED+  VALRFRLLRQ+GY VSC
Subjt:  DNDEDIYTVALRFRLLRQQGYFVSC

XP_022143529.1 (-)-germacrene D synthase-like isoform X1 [Momordica charantia]9.7e-3670.63Show/hide
Query:  MAPGNNASFNDSVPRRSANFQPSSWGDYFLYYDSNHPEDEDMVREQLGKLKEEVRSMLAAAEKCSEKLSLIDSIQRLGLSYHFEDEINEILESMQK-LCN
        MAP +  S +  + RRSANF+PS WGDYFL    N   D DMVR+QL + +EEVR ML AAEKCSEKLSLIDSIQRLG+SYHFE EINEILE MQ   CN
Subjt:  MAPGNNASFNDSVPRRSANFQPSSWGDYFLYYDSNHPEDEDMVREQLGKLKEEVRSMLAAAEKCSEKLSLIDSIQRLGLSYHFEDEINEILESMQK-LCN

Query:  VDNDEDIYTVALRFRLLRQQGYFVSC
        +D+DEDIY VALRFRLLRQQGY VSC
Subjt:  VDNDEDIYTVALRFRLLRQQGYFVSC

XP_022143530.1 valencene synthase-like isoform X2 [Momordica charantia]9.7e-3670.63Show/hide
Query:  MAPGNNASFNDSVPRRSANFQPSSWGDYFLYYDSNHPEDEDMVREQLGKLKEEVRSMLAAAEKCSEKLSLIDSIQRLGLSYHFEDEINEILESMQK-LCN
        MAP +  S +  + RRSANF+PS WGDYFL    N   D DMVR+QL + +EEVR ML AAEKCSEKLSLIDSIQRLG+SYHFE EINEILE MQ   CN
Subjt:  MAPGNNASFNDSVPRRSANFQPSSWGDYFLYYDSNHPEDEDMVREQLGKLKEEVRSMLAAAEKCSEKLSLIDSIQRLGLSYHFEDEINEILESMQK-LCN

Query:  VDNDEDIYTVALRFRLLRQQGYFVSC
        +D+DEDIY VALRFRLLRQQGY VSC
Subjt:  VDNDEDIYTVALRFRLLRQQGYFVSC

XP_022143531.1 (-)-germacrene D synthase-like isoform X1 [Momordica charantia]4.2e-3977.05Show/hide
Query:  NNASFNDSVPRRSANFQPSSWGDYFLYYDSNHPEDEDMVREQLGKLKEEVRSMLAAAEKCSEKLSLIDSIQRLGLSYHFEDEINEILESMQK-LCNVDND
        NN S NDSV RRSANF+PS WGDYFL Y  N   D DMVR+QL + +EEVR ML AAEKCSEKLSLIDSIQRLGLSYHFE EINEILE MQ   CN+D+D
Subjt:  NNASFNDSVPRRSANFQPSSWGDYFLYYDSNHPEDEDMVREQLGKLKEEVRSMLAAAEKCSEKLSLIDSIQRLGLSYHFEDEINEILESMQK-LCNVDND

Query:  EDIYTVALRFRLLRQQGYFVSC
        EDIY VALRFRLLRQQGY VSC
Subjt:  EDIYTVALRFRLLRQQGYFVSC

XP_022143532.1 (-)-germacrene D synthase-like isoform X2 [Momordica charantia]4.2e-3977.05Show/hide
Query:  NNASFNDSVPRRSANFQPSSWGDYFLYYDSNHPEDEDMVREQLGKLKEEVRSMLAAAEKCSEKLSLIDSIQRLGLSYHFEDEINEILESMQK-LCNVDND
        NN S NDSV RRSANF+PS WGDYFL Y  N   D DMVR+QL + +EEVR ML AAEKCSEKLSLIDSIQRLGLSYHFE EINEILE MQ   CN+D+D
Subjt:  NNASFNDSVPRRSANFQPSSWGDYFLYYDSNHPEDEDMVREQLGKLKEEVRSMLAAAEKCSEKLSLIDSIQRLGLSYHFEDEINEILESMQK-LCNVDND

Query:  EDIYTVALRFRLLRQQGYFVSC
        EDIY VALRFRLLRQQGY VSC
Subjt:  EDIYTVALRFRLLRQQGYFVSC

TrEMBL top hitse value%identityAlignment
A0A6J1CP21 valencene synthase-like isoform X24.7e-3670.63Show/hide
Query:  MAPGNNASFNDSVPRRSANFQPSSWGDYFLYYDSNHPEDEDMVREQLGKLKEEVRSMLAAAEKCSEKLSLIDSIQRLGLSYHFEDEINEILESMQK-LCN
        MAP +  S +  + RRSANF+PS WGDYFL    N   D DMVR+QL + +EEVR ML AAEKCSEKLSLIDSIQRLG+SYHFE EINEILE MQ   CN
Subjt:  MAPGNNASFNDSVPRRSANFQPSSWGDYFLYYDSNHPEDEDMVREQLGKLKEEVRSMLAAAEKCSEKLSLIDSIQRLGLSYHFEDEINEILESMQK-LCN

Query:  VDNDEDIYTVALRFRLLRQQGYFVSC
        +D+DEDIY VALRFRLLRQQGY VSC
Subjt:  VDNDEDIYTVALRFRLLRQQGYFVSC

A0A6J1CPK3 (-)-germacrene D synthase-like isoform X14.7e-3670.63Show/hide
Query:  MAPGNNASFNDSVPRRSANFQPSSWGDYFLYYDSNHPEDEDMVREQLGKLKEEVRSMLAAAEKCSEKLSLIDSIQRLGLSYHFEDEINEILESMQK-LCN
        MAP +  S +  + RRSANF+PS WGDYFL    N   D DMVR+QL + +EEVR ML AAEKCSEKLSLIDSIQRLG+SYHFE EINEILE MQ   CN
Subjt:  MAPGNNASFNDSVPRRSANFQPSSWGDYFLYYDSNHPEDEDMVREQLGKLKEEVRSMLAAAEKCSEKLSLIDSIQRLGLSYHFEDEINEILESMQK-LCN

Query:  VDNDEDIYTVALRFRLLRQQGYFVSC
        +D+DEDIY VALRFRLLRQQGY VSC
Subjt:  VDNDEDIYTVALRFRLLRQQGYFVSC

A0A6J1CQA8 (-)-germacrene D synthase-like isoform X11.8e-3572Show/hide
Query:  APGNNASFNDSVPRRSANFQPSSWGDYFLYYDSNHPEDEDMVREQLGKLKEEVRSMLAAAEKCSEKLSLIDSIQRLGLSYHFEDEINEILESMQKLCNV-
        AP N+ S ND V RRSANFQPS WGDYFL+   N   D DMV ++L KLKEEVRSMLAAAEKCS+KLSLIDSIQRLGLS+HFE+EINEILE MQ   ++ 
Subjt:  APGNNASFNDSVPRRSANFQPSSWGDYFLYYDSNHPEDEDMVREQLGKLKEEVRSMLAAAEKCSEKLSLIDSIQRLGLSYHFEDEINEILESMQKLCNV-

Query:  DNDEDIYTVALRFRLLRQQGYFVSC
        D+DED+  VALRFRLLRQ+GY VSC
Subjt:  DNDEDIYTVALRFRLLRQQGYFVSC

A0A6J1CQI9 (-)-germacrene D synthase-like isoform X12.0e-3977.05Show/hide
Query:  NNASFNDSVPRRSANFQPSSWGDYFLYYDSNHPEDEDMVREQLGKLKEEVRSMLAAAEKCSEKLSLIDSIQRLGLSYHFEDEINEILESMQK-LCNVDND
        NN S NDSV RRSANF+PS WGDYFL Y  N   D DMVR+QL + +EEVR ML AAEKCSEKLSLIDSIQRLGLSYHFE EINEILE MQ   CN+D+D
Subjt:  NNASFNDSVPRRSANFQPSSWGDYFLYYDSNHPEDEDMVREQLGKLKEEVRSMLAAAEKCSEKLSLIDSIQRLGLSYHFEDEINEILESMQK-LCNVDND

Query:  EDIYTVALRFRLLRQQGYFVSC
        EDIY VALRFRLLRQQGY VSC
Subjt:  EDIYTVALRFRLLRQQGYFVSC

A0A6J1CR35 (-)-germacrene D synthase-like isoform X22.0e-3977.05Show/hide
Query:  NNASFNDSVPRRSANFQPSSWGDYFLYYDSNHPEDEDMVREQLGKLKEEVRSMLAAAEKCSEKLSLIDSIQRLGLSYHFEDEINEILESMQK-LCNVDND
        NN S NDSV RRSANF+PS WGDYFL Y  N   D DMVR+QL + +EEVR ML AAEKCSEKLSLIDSIQRLGLSYHFE EINEILE MQ   CN+D+D
Subjt:  NNASFNDSVPRRSANFQPSSWGDYFLYYDSNHPEDEDMVREQLGKLKEEVRSMLAAAEKCSEKLSLIDSIQRLGLSYHFEDEINEILESMQK-LCNVDND

Query:  EDIYTVALRFRLLRQQGYFVSC
        EDIY VALRFRLLRQQGY VSC
Subjt:  EDIYTVALRFRLLRQQGYFVSC

SwissProt top hitse value%identityAlignment
B9SBV6 Probable terpene synthase 34.4e-2354.87Show/hide
Query:  RRSANFQPSSWGDYFLYYDSNHPEDE--DMVREQLGKLKEEVRSM-LAAAEKCSEKLSLIDSIQRLGLSYHFEDEINEILESMQKLCNVDNDEDIYTVAL
        RR+A F PS WGDYF+    N P+++   + +EQ   L+EEVR M ++  +K S KL LID IQRLG++YHFE+EI E++E  Q   N D+DED+Y +AL
Subjt:  RRSANFQPSSWGDYFLYYDSNHPEDE--DMVREQLGKLKEEVRSM-LAAAEKCSEKLSLIDSIQRLGLSYHFEDEINEILESMQKLCNVDNDEDIYTVAL

Query:  RFRLLRQQGYFVS
        RFRLLRQQGY VS
Subjt:  RFRLLRQQGYFVS

B9SCB6 Probable terpene synthase 22.9e-2245.83Show/hide
Query:  ASFNDSVPRRSANFQPSSWGDYFLYYDSNHPEDEDMVREQLGKLKEEVRSMLAAAEKCSEKLSLIDSIQRLGLSYHFEDEINEILESMQKL-CNVDNDED
        ++   +  R  A+F P+ WGD FL   +   + ED + +Q+ +LKEEV+ M+A+A++ S+ L+LID +QRLG+SYHFE EI E L+ +  +  + D D+D
Subjt:  ASFNDSVPRRSANFQPSSWGDYFLYYDSNHPEDEDMVREQLGKLKEEVRSMLAAAEKCSEKLSLIDSIQRLGLSYHFEDEINEILESMQKL-CNVDNDED

Query:  IYTVALRFRLLRQQGYFVSC
        +++VALRFRLLR+QG  VSC
Subjt:  IYTVALRFRLLRQQGYFVSC

J9RLZ7 Germacrene C/D synthase1.4e-2148.03Show/hide
Query:  RRSANFQPSSWGDYFLYYDSNHPEDEDMVREQLGKLKEEVRSMLAA---AEKCSEKLSLIDSIQRLGLSYHFEDEINEILESMQKLCNVD-NDEDIYTVA
        R +ANF  S WGD+FL Y SN  +  D V +Q  +LKEE+R  L      E+  E+L LID+IQRLG++YHF  EI  +L +  +L N   +D+D+Y  +
Subjt:  RRSANFQPSSWGDYFLYYDSNHPEDEDMVREQLGKLKEEVRSMLAA---AEKCSEKLSLIDSIQRLGLSYHFEDEINEILESMQKLCNVD-NDEDIYTVA

Query:  LRFRLLRQQGYFVSCG-----KSLDQR
        LRFRLLRQQGY VSC      K++D R
Subjt:  LRFRLLRQQGYFVSCG-----KSLDQR

Q6Q3H3 (-)-germacrene D synthase2.7e-2851.77Show/hide
Query:  MAPGNNASFNDSVPRRSANFQPSSWGDYFLYYDSNHPEDEDMVREQLGKLKEEVRSMLAAAEKCS-EKLSLIDSIQRLGLSYHFEDEINEILESMQKLCN
        +AP  N S    V RR ANF PS WGD+FL Y S     +D +++ + +LKEEVR ML AA+  S +KL LID+IQRLG++YHFE EI+E+L+ M     
Subjt:  MAPGNNASFNDSVPRRSANFQPSSWGDYFLYYDSNHPEDEDMVREQLGKLKEEVRSMLAAAEKCS-EKLSLIDSIQRLGLSYHFEDEINEILESMQKLCN

Query:  VDNDEDIYTVALRFRLLRQQGYFVSC----GKSLDQRNFKE
        V  +ED+YT +LRFRLLRQQGY VSC        ++ NFKE
Subjt:  VDNDEDIYTVALRFRLLRQQGYFVSC----GKSLDQRNFKE

U3LVL5 Germacrene D synthase4.4e-2353.57Show/hide
Query:  RRSANFQPSSWGDYFLYYDSNHPEDEDMVREQLGKLKEEVRSMLA-AAEKCSEKLSLIDSIQRLGLSYHFEDEINEILESMQKLCNVDNDEDIYTVALRF
        RRSA F P+ WGDYFL Y+S++ E      E+  K KE V+ +L  A    ++K+ LID+IQRLGL YHFE EI EIL+S+    N   D+D++TVALRF
Subjt:  RRSANFQPSSWGDYFLYYDSNHPEDEDMVREQLGKLKEEVRSMLA-AAEKCSEKLSLIDSIQRLGLSYHFEDEINEILESMQKLCNVDNDEDIYTVALRF

Query:  RLLRQQGYFVSC
        RLLRQ GY V+C
Subjt:  RLLRQQGYFVSC

Arabidopsis top hitse value%identityAlignment
AT2G24210.1 terpene synthase 109.1e-1644.35Show/hide
Query:  SVPRRSANFQPSSWGDYFLYYDSNHPEDEDMVREQLGKLKEEVRSMLAAAEKC-SEKLSLIDSIQRLGLSYHFEDEINEILESMQKLCNVD-NDEDIYTV
        +V RRSAN+QPS W  + L    N    +  VRE+   LKE+VR ML   +K   ++L  ID +Q+LG+SYHFE EI+ IL S  K    +  + D++  
Subjt:  SVPRRSANFQPSSWGDYFLYYDSNHPEDEDMVREQLGKLKEEVRSMLAAAEKC-SEKLSLIDSIQRLGLSYHFEDEINEILESMQKLCNVD-NDEDIYTV

Query:  ALRFRLLRQQGYFVS
        AL FRL RQ G+ VS
Subjt:  ALRFRLLRQQGYFVS

AT3G25810.1 Terpenoid cyclases/Protein prenyltransferases superfamily protein4.4e-1844.07Show/hide
Query:  RRSANFQPSSWG-DYFLYYDSNHPEDEDMVREQLGKLKEEVRSMLAAAEKCS--EKLSLIDSIQRLGLSYHFEDEINEI-----LESMQKLCNVDNDEDI
        RRS N+QPSSW   Y L  ++ +  +++++   +  LK++V+ ML   E  S  EKL LID +Q+LG+SYHFE EIN I     LE+ + +   D +ED+
Subjt:  RRSANFQPSSWG-DYFLYYDSNHPEDEDMVREQLGKLKEEVRSMLAAAEKCS--EKLSLIDSIQRLGLSYHFEDEINEI-----LESMQKLCNVDNDEDI

Query:  YTVALRFRLLRQQGYFVS
        +  AL FRLLRQ G+ VS
Subjt:  YTVALRFRLLRQQGYFVS

AT3G25820.1 terpene synthase-like sequence-1,8-cineole2.0e-1540.17Show/hide
Query:  RRSANFQPSSWGD-YFLYYDSNHPEDEDMVREQLGKLKEEVRSMLAAAEKCS-EKLSLIDSIQRLGLSYHFEDEINEILESM-----QKLCNVDNDEDIY
        RRS N+QPS W   Y L  ++ +  + +++   +  LK++V+SML   +K   E+L LID +Q+LG+SYHFE EIN+ L  +     +     D +ED++
Subjt:  RRSANFQPSSWGD-YFLYYDSNHPEDEDMVREQLGKLKEEVRSMLAAAEKCS-EKLSLIDSIQRLGLSYHFEDEINEILESM-----QKLCNVDNDEDIY

Query:  TVALRFRLLRQQGYFVS
          +L FRLLRQ G+ VS
Subjt:  TVALRFRLLRQQGYFVS

AT4G16740.1 terpene synthase 031.8e-1640.58Show/hide
Query:  VPRRSANFQPSSWGDYFLYYDSNHPEDEDMVREQLGKLKEEVRSMLAAAEKCSEKLSLIDSIQRLGLSYHFEDEINEILESMQ------KLCNVDNDE--
        V RRSAN+QPS W   +L    N    ED V E++  LK+EV  ML   E   E+L LID++QRLG+SYHFE EI + L ++           +D +   
Subjt:  VPRRSANFQPSSWGDYFLYYDSNHPEDEDMVREQLGKLKEEVRSMLAAAEKCSEKLSLIDSIQRLGLSYHFEDEINEILESMQ------KLCNVDNDE--

Query:  DIYTVALRFRLLRQQGYFV-------SCGKSLDQRNFK
        D+Y  AL FRLLRQ G+ +       + G  LD ++ K
Subjt:  DIYTVALRFRLLRQQGYFV-------SCGKSLDQRNFK

AT4G16740.2 terpene synthase 031.8e-1640.58Show/hide
Query:  VPRRSANFQPSSWGDYFLYYDSNHPEDEDMVREQLGKLKEEVRSMLAAAEKCSEKLSLIDSIQRLGLSYHFEDEINEILESMQ------KLCNVDNDE--
        V RRSAN+QPS W   +L    N    ED V E++  LK+EV  ML   E   E+L LID++QRLG+SYHFE EI + L ++           +D +   
Subjt:  VPRRSANFQPSSWGDYFLYYDSNHPEDEDMVREQLGKLKEEVRSMLAAAEKCSEKLSLIDSIQRLGLSYHFEDEINEILESMQ------KLCNVDNDE--

Query:  DIYTVALRFRLLRQQGYFV-------SCGKSLDQRNFK
        D+Y  AL FRLLRQ G+ +       + G  LD ++ K
Subjt:  DIYTVALRFRLLRQQGYFV-------SCGKSLDQRNFK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCACCAGGCAATAATGCCTCGTTCAATGATAGTGTTCCTCGTAGATCTGCAAACTTTCAACCAAGTTCTTGGGGAGATTATTTCCTTTATTACGATTCCAACCATCC
GGAGGATGAGGATATGGTCAGGGAACAACTTGGAAAACTGAAAGAAGAAGTGAGAAGCATGTTGGCAGCTGCTGAAAAATGTTCAGAAAAACTAAGTTTAATTGACTCAA
TTCAGCGCCTAGGTCTGTCTTACCACTTTGAAGATGAAATTAATGAAATTCTAGAGTCCATGCAAAAGCTTTGCAATGTTGACAATGACGAGGATATTTACACTGTTGCT
CTTAGATTTCGATTGCTTAGACAACAAGGTTACTTCGTTTCTTGCGGTAAGTCTCTCGATCAGAGAAATTTCAAAGAATTAGGTTATGTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCACCAGGCAATAATGCCTCGTTCAATGATAGTGTTCCTCGTAGATCTGCAAACTTTCAACCAAGTTCTTGGGGAGATTATTTCCTTTATTACGATTCCAACCATCC
GGAGGATGAGGATATGGTCAGGGAACAACTTGGAAAACTGAAAGAAGAAGTGAGAAGCATGTTGGCAGCTGCTGAAAAATGTTCAGAAAAACTAAGTTTAATTGACTCAA
TTCAGCGCCTAGGTCTGTCTTACCACTTTGAAGATGAAATTAATGAAATTCTAGAGTCCATGCAAAAGCTTTGCAATGTTGACAATGACGAGGATATTTACACTGTTGCT
CTTAGATTTCGATTGCTTAGACAACAAGGTTACTTCGTTTCTTGCGGTAAGTCTCTCGATCAGAGAAATTTCAAAGAATTAGGTTATGTTTGA
Protein sequenceShow/hide protein sequence
MAPGNNASFNDSVPRRSANFQPSSWGDYFLYYDSNHPEDEDMVREQLGKLKEEVRSMLAAAEKCSEKLSLIDSIQRLGLSYHFEDEINEILESMQKLCNVDNDEDIYTVA
LRFRLLRQQGYFVSCGKSLDQRNFKELGYV