; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0017792 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0017792
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRetrovirus-related Pol polyprotein from transposon TNT 1-94
Genome locationchr5:8910244..8910555
RNA-Seq ExpressionLag0017792
SyntenyLag0017792
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022148963.1 uncharacterized protein LOC111017501 [Momordica charantia]8.8e-3476.7Show/hide
Query:  MTPEVATQVMGHENARDLWVVVQELFRIQSEAKEDYLRWVFQQTHIGSLKMVDYLHVMKSHADNLGQAGSHVPAHSLISQVLLGLNEEYNVVVAMIQGRI
        MTPEVATQVMG+ENA DLW  +QELF +QS+A+EDYLR VFQQT  GSLKM D+L VMKSHADNLGQAGS VP  SLISQVLLGL+EEYN VVA IQG+ 
Subjt:  MTPEVATQVMGHENARDLWVVVQELFRIQSEAKEDYLRWVFQQTHIGSLKMVDYLHVMKSHADNLGQAGSHVPAHSLISQVLLGLNEEYNVVVAMIQGRI

Query:  EIS
         IS
Subjt:  EIS

XP_038902487.1 uncharacterized protein LOC120089143 [Benincasa hispida]6.1e-2765.05Show/hide
Query:  MTPEVATQVMGHENARDLWVVVQELFRIQSEAKEDYLRWVFQQTHIGSLKMVDYLHVMKSHADNLGQAGSHVPAHSLISQVLLGLNEEYNVVVAMIQGRI
        MT EVA QVMG+EN + LW  +QELF +QS A EDYLR VFQQT  G++KM +YL VMK+H+DNLG  GS VP  +L+SQVLLGL+EE+N  VA IQGR 
Subjt:  MTPEVATQVMGHENARDLWVVVQELFRIQSEAKEDYLRWVFQQTHIGSLKMVDYLHVMKSHADNLGQAGSHVPAHSLISQVLLGLNEEYNVVVAMIQGRI

Query:  EIS
        EIS
Subjt:  EIS

XP_038904321.1 uncharacterized protein LOC120090675 [Benincasa hispida]4.7e-2764.08Show/hide
Query:  MTPEVATQVMGHENARDLWVVVQELFRIQSEAKEDYLRWVFQQTHIGSLKMVDYLHVMKSHADNLGQAGSHVPAHSLISQVLLGLNEEYNVVVAMIQGRI
        MTP++A QVMG E ARDLW+ +Q+LF IQS A+EDYLR VFQ T  G+LKM DYL  MK + DNL QAGS VP  +L+ QVLLGL+EEYN +VA IQGR 
Subjt:  MTPEVATQVMGHENARDLWVVVQELFRIQSEAKEDYLRWVFQQTHIGSLKMVDYLHVMKSHADNLGQAGSHVPAHSLISQVLLGLNEEYNVVVAMIQGRI

Query:  EIS
        ++S
Subjt:  EIS

XP_038905161.1 uncharacterized protein LOC120091275 isoform X1 [Benincasa hispida]1.4e-2662.14Show/hide
Query:  MTPEVATQVMGHENARDLWVVVQELFRIQSEAKEDYLRWVFQQTHIGSLKMVDYLHVMKSHADNLGQAGSHVPAHSLISQVLLGLNEEYNVVVAMIQGRI
        MTPEVA QVMG E A+DLW  + +LF +QS  +EDYLR VFQ T  G+LKM +YL  MK + DNL QAGS +P  +L+SQVLLGL+EEYN +VAMIQGR+
Subjt:  MTPEVATQVMGHENARDLWVVVQELFRIQSEAKEDYLRWVFQQTHIGSLKMVDYLHVMKSHADNLGQAGSHVPAHSLISQVLLGLNEEYNVVVAMIQGRI

Query:  EIS
        ++S
Subjt:  EIS

XP_038905164.1 uncharacterized protein LOC120091275 isoform X4 [Benincasa hispida]1.4e-2662.14Show/hide
Query:  MTPEVATQVMGHENARDLWVVVQELFRIQSEAKEDYLRWVFQQTHIGSLKMVDYLHVMKSHADNLGQAGSHVPAHSLISQVLLGLNEEYNVVVAMIQGRI
        MTPEVA QVMG E A+DLW  + +LF +QS  +EDYLR VFQ T  G+LKM +YL  MK + DNL QAGS +P  +L+SQVLLGL+EEYN +VAMIQGR+
Subjt:  MTPEVATQVMGHENARDLWVVVQELFRIQSEAKEDYLRWVFQQTHIGSLKMVDYLHVMKSHADNLGQAGSHVPAHSLISQVLLGLNEEYNVVVAMIQGRI

Query:  EIS
        ++S
Subjt:  EIS

TrEMBL top hitse value%identityAlignment
A0A0A0K3F9 Uncharacterized protein2.3e-2462.5Show/hide
Query:  MTPEVATQVMGHENARDLWVVVQELFRIQSEAKEDYLRWVFQQTHIGSLKMVDYLHVMKSHADNLGQAGSHVPAHSLISQVLLGLNEEYNVVVAMI
        MTPEVA Q+MG   A+DLW  +Q+LF +Q  A+ED+LR  FQ T  G+ KM DYLH MK++ DNL QAGSHVP HSLISQV+LGL+E YN V A+I
Subjt:  MTPEVATQVMGHENARDLWVVVQELFRIQSEAKEDYLRWVFQQTHIGSLKMVDYLHVMKSHADNLGQAGSHVPAHSLISQVLLGLNEEYNVVVAMI

A0A5A7SIT7 Uncharacterized protein3.4e-2356.31Show/hide
Query:  MTPEVATQVMGHENARDLWVVVQELFRIQSEAKEDYLRWVFQQTHIGSLKMVDYLHVMKSHADNLGQAGSHVPAHSLISQVLLGLNEEYNVVVAMIQGRI
        MTP+VA Q+MG  N  DLW   Q+ F +QS A+ED+LR + Q T  G+ KM +YL VMK++ DNLGQ GS VP  +LISQVLLGL+E YN+V+ +IQG+ 
Subjt:  MTPEVATQVMGHENARDLWVVVQELFRIQSEAKEDYLRWVFQQTHIGSLKMVDYLHVMKSHADNLGQAGSHVPAHSLISQVLLGLNEEYNVVVAMIQGRI

Query:  EIS
        +IS
Subjt:  EIS

A0A5D3E3L7 Uncharacterized protein3.4e-2359.22Show/hide
Query:  MTPEVATQVMGHENARDLWVVVQELFRIQSEAKEDYLRWVFQQTHIGSLKMVDYLHVMKSHADNLGQAGSHVPAHSLISQVLLGLNEEYNVVVAMIQGRI
        M P+VA Q+MG   A+DLW  +Q LF I+S A+E +LR  FQ T  G+ KM DYL +MK +ADNLGQAGS VP   LISQVLLGL+E YN V A+IQG+ 
Subjt:  MTPEVATQVMGHENARDLWVVVQELFRIQSEAKEDYLRWVFQQTHIGSLKMVDYLHVMKSHADNLGQAGSHVPAHSLISQVLLGLNEEYNVVVAMIQGRI

Query:  EIS
        +IS
Subjt:  EIS

A0A6J1D5J0 uncharacterized protein LOC1110175014.2e-3476.7Show/hide
Query:  MTPEVATQVMGHENARDLWVVVQELFRIQSEAKEDYLRWVFQQTHIGSLKMVDYLHVMKSHADNLGQAGSHVPAHSLISQVLLGLNEEYNVVVAMIQGRI
        MTPEVATQVMG+ENA DLW  +QELF +QS+A+EDYLR VFQQT  GSLKM D+L VMKSHADNLGQAGS VP  SLISQVLLGL+EEYN VVA IQG+ 
Subjt:  MTPEVATQVMGHENARDLWVVVQELFRIQSEAKEDYLRWVFQQTHIGSLKMVDYLHVMKSHADNLGQAGSHVPAHSLISQVLLGLNEEYNVVVAMIQGRI

Query:  EIS
         IS
Subjt:  EIS

A0A6J1DCW4 uncharacterized protein LOC1110195982.3e-2457.28Show/hide
Query:  MTPEVATQVMGHENARDLWVVVQELFRIQSEAKEDYLRWVFQQTHIGSLKMVDYLHVMKSHADNLGQAGSHVPAHSLISQVLLGLNEEYNVVVAMIQGRI
        M  +VA QVMG   +R+LW  VQELF +QS A+ DYL+ VFQQT  GSL+M++YL +MKSHADNL  AGS V    L+SQVL GL+EEYN +V  +QG++
Subjt:  MTPEVATQVMGHENARDLWVVVQELFRIQSEAKEDYLRWVFQQTHIGSLKMVDYLHVMKSHADNLGQAGSHVPAHSLISQVLLGLNEEYNVVVAMIQGRI

Query:  EIS
         +S
Subjt:  EIS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G34070.1 CONTAINS InterPro DOMAIN/s: Retrotransposon gag protein (InterPro:IPR005162)1.8e-0529.41Show/hide
Query:  ARDLWVVVQELFRIQSEAKEDYLRWVFQQTHIGSLKMVDYLHVMKSHADNLGQAGSHVPAHSLISQVLLGLNEEYNVVVAMIQGR
        +RD+W+ ++  FR   +A+   L    +   IG +++ DY   MK  AD+L      V   +L+  VL GLN +++ ++ +I+ R
Subjt:  ARDLWVVVQELFRIQSEAKEDYLRWVFQQTHIGSLKMVDYLHVMKSHADNLGQAGSHVPAHSLISQVLLGLNEEYNVVVAMIQGR

AT5G48050.1 CONTAINS InterPro DOMAIN/s: Retrotransposon gag protein (InterPro:IPR005162)4.1e-0531.33Show/hide
Query:  ARDLWVVVQELFRIQSEAKEDYLRWVFQQTHIGSLKMVDYLHVMKSHADNLGQAGSHVPAHSLISQVLLGLNEEYNVVVAMIQ
        ARDLW+ ++ LFR   EA+        + T I  L + +Y   +KS +D L    S +    L+  +L GL E+Y+ ++ +I+
Subjt:  ARDLWVVVQELFRIQSEAKEDYLRWVFQQTHIGSLKMVDYLHVMKSHADNLGQAGSHVPAHSLISQVLLGLNEEYNVVVAMIQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACACCTGAGGTAGCAACCCAAGTTATGGGGCATGAAAATGCAAGAGATCTTTGGGTTGTTGTGCAAGAGTTATTCAGAATCCAGTCTGAAGCCAAGGAAGATTATCT
TCGTTGGGTATTTCAACAGACTCATATTGGTTCTCTTAAAATGGTTGATTATTTGCATGTTATGAAATCGCATGCAGATAACTTGGGTCAAGCAGGAAGTCATGTCCCAG
CTCACTCTCTAATTTCTCAGGTCCTCTTAGGACTAAATGAGGAATACAATGTTGTAGTAGCCATGATTCAGGGAAGAATCGAAATATCCTAG
mRNA sequenceShow/hide mRNA sequence
ATGACACCTGAGGTAGCAACCCAAGTTATGGGGCATGAAAATGCAAGAGATCTTTGGGTTGTTGTGCAAGAGTTATTCAGAATCCAGTCTGAAGCCAAGGAAGATTATCT
TCGTTGGGTATTTCAACAGACTCATATTGGTTCTCTTAAAATGGTTGATTATTTGCATGTTATGAAATCGCATGCAGATAACTTGGGTCAAGCAGGAAGTCATGTCCCAG
CTCACTCTCTAATTTCTCAGGTCCTCTTAGGACTAAATGAGGAATACAATGTTGTAGTAGCCATGATTCAGGGAAGAATCGAAATATCCTAG
Protein sequenceShow/hide protein sequence
MTPEVATQVMGHENARDLWVVVQELFRIQSEAKEDYLRWVFQQTHIGSLKMVDYLHVMKSHADNLGQAGSHVPAHSLISQVLLGLNEEYNVVVAMIQGRIEIS