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Lag0017793 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0017793
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRetrovirus-related Pol polyprotein from transposon TNT 1-94
Genome locationchr5:8910672..8911180
RNA-Seq ExpressionLag0017793
SyntenyLag0017793
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0051899.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]4.2e-0740Show/hide
Query:  VNRGAKSGGNGTQNGGTNQMNPIVSQAFLTTQSINPFVANPKSVVDSNWYADNGASNHVTIDYNNMIHSSEYGSNEKFVVGNGCELSYFS
        V    K+   GT N   N  N  +S AF+T+   NPF    ++ VD+NWYA+N A NH+T DY N+ +  EYG   +  +GNG +L   S
Subjt:  VNRGAKSGGNGTQNGGTNQMNPIVSQAFLTTQSINPFVANPKSVVDSNWYADNGASNHVTIDYNNMIHSSEYGSNEKFVVGNGCELSYFS

TXG59508.1 hypothetical protein EZV62_014081 [Acer yangbiense]5.4e-0741.77Show/hide
Query:  AKSGGNGTQNGGTNQMNPIVSQAFLTTQSINPFVANPKSVVDSNWYADNGASNHVTIDYNNMIHSSEYGSNEKFVVGNG
        A+  G G   G  N   P+     + + S+N    +  SV D NWY DNGA+NH+T D+NN+  +SEY   E+ VVGNG
Subjt:  AKSGGNGTQNGGTNQMNPIVSQAFLTTQSINPFVANPKSVVDSNWYADNGASNHVTIDYNNMIHSSEYGSNEKFVVGNG

TXG59841.1 hypothetical protein EZV62_014414 [Acer yangbiense]4.2e-0752.73Show/hide
Query:  SINPFVANPKSVVDSNWYADNGASNHVTIDYNNMIHSSEYGSNEKFVVGNGCELS
        S+N   A+  SV DSNWY D+GA+NH+T D+NN+  SSEY  N++  VGNG  L+
Subjt:  SINPFVANPKSVVDSNWYADNGASNHVTIDYNNMIHSSEYGSNEKFVVGNGCELS

TYJ99887.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]4.2e-0740Show/hide
Query:  VNRGAKSGGNGTQNGGTNQMNPIVSQAFLTTQSINPFVANPKSVVDSNWYADNGASNHVTIDYNNMIHSSEYGSNEKFVVGNGCELSYFS
        V    K+   GT N   N  N  +S AF+T+   NPF    ++ VD+NWYA+N A NH+T DY N+ +  EYG   +  +GNG +L   S
Subjt:  VNRGAKSGGNGTQNGGTNQMNPIVSQAFLTTQSINPFVANPKSVVDSNWYADNGASNHVTIDYNNMIHSSEYGSNEKFVVGNGCELSYFS

XP_016901889.1 PREDICTED: uncharacterized protein LOC107991455 [Cucumis melo]2.2e-0851.28Show/hide
Query:  GNGTQNGGTNQMNPIVSQAFLTTQSINPFVANPKSVVDSNWYADNGASNHVTIDYNNMIHSSEYGSNEKFVVGNGCEL
        G  T   G +  NP    AF+TTQ+ NPF A  + VVDSNWY D+GA+N+VT+DY N+ + +EY S E F VGNG +L
Subjt:  GNGTQNGGTNQMNPIVSQAFLTTQSINPFVANPKSVVDSNWYADNGASNHVTIDYNNMIHSSEYGSNEKFVVGNGCEL

TrEMBL top hitse value%identityAlignment
A0A1S4E0Z3 uncharacterized protein LOC1079914551.1e-0851.28Show/hide
Query:  GNGTQNGGTNQMNPIVSQAFLTTQSINPFVANPKSVVDSNWYADNGASNHVTIDYNNMIHSSEYGSNEKFVVGNGCEL
        G  T   G +  NP    AF+TTQ+ NPF A  + VVDSNWY D+GA+N+VT+DY N+ + +EY S E F VGNG +L
Subjt:  GNGTQNGGTNQMNPIVSQAFLTTQSINPFVANPKSVVDSNWYADNGASNHVTIDYNNMIHSSEYGSNEKFVVGNGCEL

A0A5A7UEH3 Retrovirus-related Pol polyprotein from transposon TNT 1-942.0e-0740Show/hide
Query:  VNRGAKSGGNGTQNGGTNQMNPIVSQAFLTTQSINPFVANPKSVVDSNWYADNGASNHVTIDYNNMIHSSEYGSNEKFVVGNGCELSYFS
        V    K+   GT N   N  N  +S AF+T+   NPF    ++ VD+NWYA+N A NH+T DY N+ +  EYG   +  +GNG +L   S
Subjt:  VNRGAKSGGNGTQNGGTNQMNPIVSQAFLTTQSINPFVANPKSVVDSNWYADNGASNHVTIDYNNMIHSSEYGSNEKFVVGNGCELSYFS

A0A5C7HRS3 Uncharacterized protein2.6e-0741.77Show/hide
Query:  AKSGGNGTQNGGTNQMNPIVSQAFLTTQSINPFVANPKSVVDSNWYADNGASNHVTIDYNNMIHSSEYGSNEKFVVGNG
        A+  G G   G  N   P+     + + S+N    +  SV D NWY DNGA+NH+T D+NN+  +SEY   E+ VVGNG
Subjt:  AKSGGNGTQNGGTNQMNPIVSQAFLTTQSINPFVANPKSVVDSNWYADNGASNHVTIDYNNMIHSSEYGSNEKFVVGNG

A0A5C7HRZ7 Uncharacterized protein2.0e-0752.73Show/hide
Query:  SINPFVANPKSVVDSNWYADNGASNHVTIDYNNMIHSSEYGSNEKFVVGNGCELS
        S+N   A+  SV DSNWY D+GA+NH+T D+NN+  SSEY  N++  VGNG  L+
Subjt:  SINPFVANPKSVVDSNWYADNGASNHVTIDYNNMIHSSEYGSNEKFVVGNGCELS

A0A5D3BL83 Retrovirus-related Pol polyprotein from transposon TNT 1-942.0e-0740Show/hide
Query:  VNRGAKSGGNGTQNGGTNQMNPIVSQAFLTTQSINPFVANPKSVVDSNWYADNGASNHVTIDYNNMIHSSEYGSNEKFVVGNGCELSYFS
        V    K+   GT N   N  N  +S AF+T+   NPF    ++ VD+NWYA+N A NH+T DY N+ +  EYG   +  +GNG +L   S
Subjt:  VNRGAKSGGNGTQNGGTNQMNPIVSQAFLTTQSINPFVANPKSVVDSNWYADNGASNHVTIDYNNMIHSSEYGSNEKFVVGNGCELSYFS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTCTTTTCAACAGCGACAACAAAACTCCTCTATCAGTCGGCAACAATACAGTAATAATCAATGTGAATGAAGAGGTAGAAACCGAGGTCGAGGGTGCTAGAATGAG
TGTTAATCGTGGTGCAAAATCTGGTGGAAATGGCACACAAAATGGGGGTACAAATCAGATGAATCCAATAGTCTCTCAAGCCTTCCTCACTACTCAAAGCATTAATCCAT
TCGTAGCAAATCCTAAGTCGGTTGTTGATTCGAATTGGTATGCCGACAATGGTGCCTCCAATCATGTCACGATCGATTACAATAACATGATACATTCATCTGAGTATGGA
AGTAATGAAAAATTTGTAGTAGGTAATGGTTGTGAGTTATCCTATTTCTCATATTGGTTTGTCATACTTGACTTCGAAAGATAG
mRNA sequenceShow/hide mRNA sequence
ATGTCTCTTTTCAACAGCGACAACAAAACTCCTCTATCAGTCGGCAACAATACAGTAATAATCAATGTGAATGAAGAGGTAGAAACCGAGGTCGAGGGTGCTAGAATGAG
TGTTAATCGTGGTGCAAAATCTGGTGGAAATGGCACACAAAATGGGGGTACAAATCAGATGAATCCAATAGTCTCTCAAGCCTTCCTCACTACTCAAAGCATTAATCCAT
TCGTAGCAAATCCTAAGTCGGTTGTTGATTCGAATTGGTATGCCGACAATGGTGCCTCCAATCATGTCACGATCGATTACAATAACATGATACATTCATCTGAGTATGGA
AGTAATGAAAAATTTGTAGTAGGTAATGGTTGTGAGTTATCCTATTTCTCATATTGGTTTGTCATACTTGACTTCGAAAGATAG
Protein sequenceShow/hide protein sequence
MSLFNSDNKTPLSVGNNTVIINVNEEVETEVEGARMSVNRGAKSGGNGTQNGGTNQMNPIVSQAFLTTQSINPFVANPKSVVDSNWYADNGASNHVTIDYNNMIHSSEYG
SNEKFVVGNGCELSYFSYWFVILDFER