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Lag0017795 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0017795
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionGATA transcription factor 16-like
Genome locationchr5:8926467..8929852
RNA-Seq ExpressionLag0017795
SyntenyLag0017795
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0008270 - zinc ion binding (molecular function)
GO:0043565 - sequence-specific DNA binding (molecular function)
InterPro domainsIPR013088 - Zinc finger, NHR/GATA-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004150081.1 GATA transcription factor 16 [Cucumis sativus]2.1e-0680.56Show/hide
Query:  QEGSEFKYVGKSSSPVESEQNKKTCANCGTTKTPLW
        +EGSEFK  GK +SP+ESEQNKKTCA+CGTTKTPLW
Subjt:  QEGSEFKYVGKSSSPVESEQNKKTCANCGTTKTPLW
XP_008458384.1 PREDICTED: GATA transcription factor 16-like isoform X1 [Cucumis melo]2.1e-0680.56Show/hide
Query:  QEGSEFKYVGKSSSPVESEQNKKTCANCGTTKTPLW
        +EGSEFK  GK +SP+ESEQNKKTCA+CGTTKTPLW
Subjt:  QEGSEFKYVGKSSSPVESEQNKKTCANCGTTKTPLW
XP_022138518.1 GATA transcription factor 16-like [Momordica charantia]1.0e-0571.79Show/hide
Query:  QEGSEFKYVGKS---SSPVESEQNKKTCANCGTTKTPLW
        +EGSEFK  G+S   +SP ESEQN+KTCA+CGTTKTPLW
Subjt:  QEGSEFKYVGKS---SSPVESEQNKKTCANCGTTKTPLW
XP_023548663.1 GATA transcription factor 16-like [Cucurbita pepo subsp. pepo]3.0e-0574.36Show/hide
Query:  QEGSEFKYVGKS---SSPVESEQNKKTCANCGTTKTPLW
        +EGSEFK    S   SSP ESEQNKKTCA+CGTTKTPLW
Subjt:  QEGSEFKYVGKS---SSPVESEQNKKTCANCGTTKTPLW
XP_038875288.1 GATA transcription factor 16-like [Benincasa hispida]1.2e-0683.33Show/hide
Query:  QEGSEFKYVGKSSSPVESEQNKKTCANCGTTKTPLW
        +EGSEFK  GK SSP ESEQNKKTCA+CGTTKTPLW
Subjt:  QEGSEFKYVGKSSSPVESEQNKKTCANCGTTKTPLW
TrEMBL top hitse value%identityAlignment
A0A0A0KG76 GATA-type domain-containing protein1.0e-0680.56Show/hide
Query:  QEGSEFKYVGKSSSPVESEQNKKTCANCGTTKTPLW
        +EGSEFK  GK +SP+ESEQNKKTCA+CGTTKTPLW
Subjt:  QEGSEFKYVGKSSSPVESEQNKKTCANCGTTKTPLW
A0A1S3C8C2 GATA transcription factor 16-like isoform X11.0e-0680.56Show/hide
Query:  QEGSEFKYVGKSSSPVESEQNKKTCANCGTTKTPLW
        +EGSEFK  GK +SP+ESEQNKKTCA+CGTTKTPLW
Subjt:  QEGSEFKYVGKSSSPVESEQNKKTCANCGTTKTPLW
A0A5D3BXI1 GATA transcription factor 16-like isoform X11.0e-0680.56Show/hide
Query:  QEGSEFKYVGKSSSPVESEQNKKTCANCGTTKTPLW
        +EGSEFK  GK +SP+ESEQNKKTCA+CGTTKTPLW
Subjt:  QEGSEFKYVGKSSSPVESEQNKKTCANCGTTKTPLW
A0A6J1CD73 GATA transcription factor 16-like5.0e-0671.79Show/hide
Query:  QEGSEFKYVGKS---SSPVESEQNKKTCANCGTTKTPLW
        +EGSEFK  G+S   +SP ESEQN+KTCA+CGTTKTPLW
Subjt:  QEGSEFKYVGKS---SSPVESEQNKKTCANCGTTKTPLW
A0A6J1KXU7 GATA transcription factor 16-like1.5e-0574.36Show/hide
Query:  QEGSEFKYVGKS---SSPVESEQNKKTCANCGTTKTPLW
        +EGSEFK    S   SSP ESEQNKKTCA+CGTTKTPLW
Subjt:  QEGSEFKYVGKS---SSPVESEQNKKTCANCGTTKTPLW
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTAAAACTATTGTTCATTAGAGGATTAGTGGTACTCAAGGAGCAAGAGGGATCGGAGTTCAAGTATGTCGGAAAGTCGTCGTCGCCGGTGGAAAGTGAGCAGAATAA
AAAGACTTGCGCCAATTGCGGCACGACGAAGACTCCTCTCTGGTTGGAGGTCCGGCCAGCCCTAAGAAGATTGACAATTTTTCAAGGAATTGAAATCAAAATTGAAATTG
CAGTTGCATTTGAATTGGATTCTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGTAAAACTATTGTTCATTAGAGGATTAGTGGTACTCAAGGAGCAAGAGGGATCGGAGTTCAAGTATGTCGGAAAGTCGTCGTCGCCGGTGGAAAGTGAGCAGAATAA
AAAGACTTGCGCCAATTGCGGCACGACGAAGACTCCTCTCTGGTTGGAGGTCCGGCCAGCCCTAAGAAGATTGACAATTTTTCAAGGAATTGAAATCAAAATTGAAATTG
CAGTTGCATTTGAATTGGATTCTTAG
Protein sequenceShow/hide protein sequence
MVKLLFIRGLVVLKEQEGSEFKYVGKSSSPVESEQNKKTCANCGTTKTPLWLEVRPALRRLTIFQGIEIKIEIAVAFELDS