; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0017799 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0017799
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase, RNA-dependent DNA polymerase
Genome locationchr5:9028267..9028962
RNA-Seq ExpressionLag0017799
SyntenyLag0017799
Gene Ontology termsGO:0006259 - DNA metabolic process (biological process)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0026100.1 uncharacterized protein E6C27_scaffold19G00360 [Cucumis melo var. makuwa]2.5e-5758.45Show/hide
Query:  FSSPPLNQLLNQITTIKLDRGNYLLWKNLALPILRSYKLEGHLLGTKPCPPQYIAQSTPVVNPNATTAERGESSTRAPFSGASETTSPALTMVSNPLYEA
        FS+PPLNQ+LNQ+ T+KLDR NYLLWK LALPIL+ YKLEGHL G  PCP  ++  ++   + N T  E G  +T     GAS + +P +    N L+E 
Subjt:  FSSPPLNQLLNQITTIKLDRGNYLLWKNLALPILRSYKLEGHLLGTKPCPPQYIAQSTPVVNPNATTAERGESSTRAPFSGASETTSPALTMVSNPLYEA

Query:  WVTTYQLLLGWLYNSMTAEVATQVMGYENTMDLWEAITELFGLQSRAEEDYLRQIFQQTRKGNKKMSDYLRIMKSHADNLGQTSSPVSLRNLISQVLLGL
        WVTT  LLLGWLYNSMT +VA Q+MG+ N  DLW+A  + FG+QSRAEED+LRQ+ Q TRKGN KM +YL +MK++ DNLGQ  SPV  R LISQVLLGL
Subjt:  WVTTYQLLLGWLYNSMTAEVATQVMGYENTMDLWEAITELFGLQSRAEEDYLRQIFQQTRKGNKKMSDYLRIMKSHADNLGQTSSPVSLRNLISQVLLGL

Query:  DEEFNPV
        DE +N V
Subjt:  DEEFNPV

KAA0067279.1 uncharacterized protein E6C27_scaffold418G001000 [Cucumis melo var. makuwa]6.3e-4855.56Show/hide
Query:  TTFSSPPLNQLLNQITTIKLDRGNYLLWKNLALPILRSYKLEGHLLGTKPCPPQYIAQSTPVVNPNATTAER-GESSTRAPFSGASETTSPALTMVS-NP
        T+F++P LNQ+LNQ+TTIKLDRGNYLLWK LALPIL+SYKL  HL G  PC P+ I  +T    PN +  E  GE S         ET+S +  +V+ NP
Subjt:  TTFSSPPLNQLLNQITTIKLDRGNYLLWKNLALPILRSYKLEGHLLGTKPCPPQYIAQSTPVVNPNATTAER-GESSTRAPFSGASETTSPALTMVS-NP

Query:  LYEAWVTTYQLLLGWLYNSMTAEVATQVMGYENTMDLWEAITELFGLQSRAEEDYLRQIFQQTRKGNKKMSDYLRIMKSHADNLGQTSSPVSLRNLIS
         YE W+TT  LLLGWLYNSMT EV  Q+MG+ N  DLWEA  +LFG+QSRA+ED+L Q FQ T+KGN  M +YLR MK++ +NLGQ  S V    ++S
Subjt:  LYEAWVTTYQLLLGWLYNSMTAEVATQVMGYENTMDLWEAITELFGLQSRAEEDYLRQIFQQTRKGNKKMSDYLRIMKSHADNLGQTSSPVSLRNLIS

TYJ96311.1 uncharacterized protein E5676_scaffold1970G00140 [Cucumis melo var. makuwa]2.5e-5257.44Show/hide
Query:  FSSPPLNQLLNQITTIKLDRGNYLLWKNLALPILRSYKLEGHLLGTKPCPPQYIAQSTPVVNPNATTAERGESSTRAPFSGASETTSPALTMVSNPLYEA
        FS+PPLNQ+LNQ+ T+KLDR NYLLWK LALPIL+ YKLEGHL G  PCP  ++  ++   + N T  E G  +T     GAS + +P +    N L+E 
Subjt:  FSSPPLNQLLNQITTIKLDRGNYLLWKNLALPILRSYKLEGHLLGTKPCPPQYIAQSTPVVNPNATTAERGESSTRAPFSGASETTSPALTMVSNPLYEA

Query:  WVTTYQLLLGWLYNSMTAEVATQVMGYENTMDLWEAITELFGLQSRAEEDYLRQIFQQTRKGNKKMSDYLRIMKSHADNLGQTSSPVSLRNLISQ
        WVTT  LLLGWLYNSMT +VA Q+MG+ N  DLW+A  + FG+QSRAEED+LRQ+ Q TRKGN KM +YL +MK++ DNLGQ  SPV  R LISQ
Subjt:  WVTTYQLLLGWLYNSMTAEVATQVMGYENTMDLWEAITELFGLQSRAEEDYLRQIFQQTRKGNKKMSDYLRIMKSHADNLGQTSSPVSLRNLISQ

XP_022151683.1 uncharacterized protein LOC111019598 [Momordica charantia]1.9e-5755.45Show/hide
Query:  ITGANMVTGNITTFSSPPLNQLLNQITTIKLDRGNYLLWKNLALPILRSYKLEGHLLGTKPCPPQYIAQSTPVVNPNATTAERGESSTRAPFSGASETTS
        +T   +V+G +  F+SPPLNQLLNQIT+IK+DRGN+LLW+NLALPILRSYKL  +L G KPCPP ++  +    N   +T               S  +S
Subjt:  ITGANMVTGNITTFSSPPLNQLLNQITTIKLDRGNYLLWKNLALPILRSYKLEGHLLGTKPCPPQYIAQSTPVVNPNATTAERGESSTRAPFSGASETTS

Query:  PALTMVSNPLYEAWVTTYQLLLGWLYNSMTAEVATQVMGYENTMDLWEAITELFGLQSRAEEDYLRQIFQQTRKGNKKMSDYLRIMKSHADNLGQTSSPV
        P L    NP YEAW+   +LLLGWLYNSM A+VA QVMG+  + +LW A+ ELFG+QSRAE DYL+Q+FQQT KG+ +M +YL++MKSHADNL    S V
Subjt:  PALTMVSNPLYEAWVTTYQLLLGWLYNSMTAEVATQVMGYENTMDLWEAITELFGLQSRAEEDYLRQIFQQTRKGNKKMSDYLRIMKSHADNLGQTSSPV

Query:  SLRNLISQVLLGLDEEFNPV
        S+R+L+SQVL GLDEE+NP+
Subjt:  SLRNLISQVLLGLDEEFNPV

XP_038902487.1 uncharacterized protein LOC120089143 [Benincasa hispida]9.1e-5561.31Show/hide
Query:  TTIKLDRGNYLLWKNLALPILRSYKLEGHLLGTKPCPPQYIA---QSTPVVNPNATTAERGESS---TRAPFSGASETTSPALTMVSNPLYEAWVTTYQL
        TTIKLD+ NYLLW+NLALPILRSY+LEGHL G  PCPP++     QST  V P       G+ S   +  P  G +  ++ +  +  NP YE+     QL
Subjt:  TTIKLDRGNYLLWKNLALPILRSYKLEGHLLGTKPCPPQYIA---QSTPVVNPNATTAERGESS---TRAPFSGASETTSPALTMVSNPLYEAWVTTYQL

Query:  LLGWLYNSMTAEVATQVMGYENTMDLWEAITELFGLQSRAEEDYLRQIFQQTRKGNKKMSDYLRIMKSHADNLGQTSSPVSLRNLISQVLLGLDEEFNP
        LLGWLYN MTAEVA QVMGYEN   LW AI ELFGLQSRA EDYLRQ+FQQT KG  KM +YLR+MK+H+DNLG T SPV  R L+SQVLLGLDEEFNP
Subjt:  LLGWLYNSMTAEVATQVMGYENTMDLWEAITELFGLQSRAEEDYLRQIFQQTRKGNKKMSDYLRIMKSHADNLGQTSSPVSLRNLISQVLLGLDEEFNP

TrEMBL top hitse value%identityAlignment
A0A5A7SIT7 Uncharacterized protein1.2e-5758.45Show/hide
Query:  FSSPPLNQLLNQITTIKLDRGNYLLWKNLALPILRSYKLEGHLLGTKPCPPQYIAQSTPVVNPNATTAERGESSTRAPFSGASETTSPALTMVSNPLYEA
        FS+PPLNQ+LNQ+ T+KLDR NYLLWK LALPIL+ YKLEGHL G  PCP  ++  ++   + N T  E G  +T     GAS + +P +    N L+E 
Subjt:  FSSPPLNQLLNQITTIKLDRGNYLLWKNLALPILRSYKLEGHLLGTKPCPPQYIAQSTPVVNPNATTAERGESSTRAPFSGASETTSPALTMVSNPLYEA

Query:  WVTTYQLLLGWLYNSMTAEVATQVMGYENTMDLWEAITELFGLQSRAEEDYLRQIFQQTRKGNKKMSDYLRIMKSHADNLGQTSSPVSLRNLISQVLLGL
        WVTT  LLLGWLYNSMT +VA Q+MG+ N  DLW+A  + FG+QSRAEED+LRQ+ Q TRKGN KM +YL +MK++ DNLGQ  SPV  R LISQVLLGL
Subjt:  WVTTYQLLLGWLYNSMTAEVATQVMGYENTMDLWEAITELFGLQSRAEEDYLRQIFQQTRKGNKKMSDYLRIMKSHADNLGQTSSPVSLRNLISQVLLGL

Query:  DEEFNPV
        DE +N V
Subjt:  DEEFNPV

A0A5A7VPY0 Uncharacterized protein3.0e-4855.56Show/hide
Query:  TTFSSPPLNQLLNQITTIKLDRGNYLLWKNLALPILRSYKLEGHLLGTKPCPPQYIAQSTPVVNPNATTAER-GESSTRAPFSGASETTSPALTMVS-NP
        T+F++P LNQ+LNQ+TTIKLDRGNYLLWK LALPIL+SYKL  HL G  PC P+ I  +T    PN +  E  GE S         ET+S +  +V+ NP
Subjt:  TTFSSPPLNQLLNQITTIKLDRGNYLLWKNLALPILRSYKLEGHLLGTKPCPPQYIAQSTPVVNPNATTAER-GESSTRAPFSGASETTSPALTMVS-NP

Query:  LYEAWVTTYQLLLGWLYNSMTAEVATQVMGYENTMDLWEAITELFGLQSRAEEDYLRQIFQQTRKGNKKMSDYLRIMKSHADNLGQTSSPVSLRNLIS
         YE W+TT  LLLGWLYNSMT EV  Q+MG+ N  DLWEA  +LFG+QSRA+ED+L Q FQ T+KGN  M +YLR MK++ +NLGQ  S V    ++S
Subjt:  LYEAWVTTYQLLLGWLYNSMTAEVATQVMGYENTMDLWEAITELFGLQSRAEEDYLRQIFQQTRKGNKKMSDYLRIMKSHADNLGQTSSPVSLRNLIS

A0A5D3BCH9 Uncharacterized protein1.2e-5257.44Show/hide
Query:  FSSPPLNQLLNQITTIKLDRGNYLLWKNLALPILRSYKLEGHLLGTKPCPPQYIAQSTPVVNPNATTAERGESSTRAPFSGASETTSPALTMVSNPLYEA
        FS+PPLNQ+LNQ+ T+KLDR NYLLWK LALPIL+ YKLEGHL G  PCP  ++  ++   + N T  E G  +T     GAS + +P +    N L+E 
Subjt:  FSSPPLNQLLNQITTIKLDRGNYLLWKNLALPILRSYKLEGHLLGTKPCPPQYIAQSTPVVNPNATTAERGESSTRAPFSGASETTSPALTMVSNPLYEA

Query:  WVTTYQLLLGWLYNSMTAEVATQVMGYENTMDLWEAITELFGLQSRAEEDYLRQIFQQTRKGNKKMSDYLRIMKSHADNLGQTSSPVSLRNLISQ
        WVTT  LLLGWLYNSMT +VA Q+MG+ N  DLW+A  + FG+QSRAEED+LRQ+ Q TRKGN KM +YL +MK++ DNLGQ  SPV  R LISQ
Subjt:  WVTTYQLLLGWLYNSMTAEVATQVMGYENTMDLWEAITELFGLQSRAEEDYLRQIFQQTRKGNKKMSDYLRIMKSHADNLGQTSSPVSLRNLISQ

A0A6J1D5J0 uncharacterized protein LOC1110175011.6e-4470.8Show/hide
Query:  GESSTRAPFSGASETTSPALTMVSNPLYEAWVTTYQLLLGWLYNSMTAEVATQVMGYENTMDLWEAITELFGLQSRAEEDYLRQIFQQTRKGNKKMSDYL
        G   T      A  ++S A     NPLYE+WVTT QLLLGWLYNSMT EVATQVMGYEN  DLW AI ELFG+QS+AEEDYLRQ+FQQTRKG+ KM+D+L
Subjt:  GESSTRAPFSGASETTSPALTMVSNPLYEAWVTTYQLLLGWLYNSMTAEVATQVMGYENTMDLWEAITELFGLQSRAEEDYLRQIFQQTRKGNKKMSDYL

Query:  RIMKSHADNLGQTSSPVSLRNLISQVLLGLDEEFNPV
        R+MKSHADNLGQ  SPV  R+LISQVLLGLDEE+NPV
Subjt:  RIMKSHADNLGQTSSPVSLRNLISQVLLGLDEEFNPV

A0A6J1DCW4 uncharacterized protein LOC1110195989.4e-5855.45Show/hide
Query:  ITGANMVTGNITTFSSPPLNQLLNQITTIKLDRGNYLLWKNLALPILRSYKLEGHLLGTKPCPPQYIAQSTPVVNPNATTAERGESSTRAPFSGASETTS
        +T   +V+G +  F+SPPLNQLLNQIT+IK+DRGN+LLW+NLALPILRSYKL  +L G KPCPP ++  +    N   +T               S  +S
Subjt:  ITGANMVTGNITTFSSPPLNQLLNQITTIKLDRGNYLLWKNLALPILRSYKLEGHLLGTKPCPPQYIAQSTPVVNPNATTAERGESSTRAPFSGASETTS

Query:  PALTMVSNPLYEAWVTTYQLLLGWLYNSMTAEVATQVMGYENTMDLWEAITELFGLQSRAEEDYLRQIFQQTRKGNKKMSDYLRIMKSHADNLGQTSSPV
        P L    NP YEAW+   +LLLGWLYNSM A+VA QVMG+  + +LW A+ ELFG+QSRAE DYL+Q+FQQT KG+ +M +YL++MKSHADNL    S V
Subjt:  PALTMVSNPLYEAWVTTYQLLLGWLYNSMTAEVATQVMGYENTMDLWEAITELFGLQSRAEEDYLRQIFQQTRKGNKKMSDYLRIMKSHADNLGQTSSPV

Query:  SLRNLISQVLLGLDEEFNPV
        S+R+L+SQVL GLDEE+NP+
Subjt:  SLRNLISQVLLGLDEEFNPV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTATCAAAGCAGACCACGACCAACGTCAACATCACCGGTGCAAATATGGTCACCGGAAATATCACAACATTCAGCAGTCCACCACTCAATCAACTACTCAACCAAAT
CACGACAATCAAGCTCGATCGAGGAAATTATCTACTGTGGAAGAATCTCGCCCTCCCGATTCTAAGGAGCTACAAGCTGGAAGGACACCTATTGGGGACGAAACCCTGTC
CTCCACAATACATTGCTCAGTCGACACCAGTCGTCAACCCAAATGCTACAACAGCAGAAAGAGGAGAATCCAGCACTAGAGCTCCATTCAGTGGAGCTTCTGAAACTACA
AGTCCTGCACTAACAATGGTATCTAATCCACTTTATGAGGCTTGGGTAACAACATACCAACTTCTATTGGGATGGTTGTACAACTCGATGACCGCTGAAGTTGCCACCCA
AGTGATGGGATACGAAAACACCATGGATCTCTGGGAAGCCATCACGGAGCTGTTTGGTCTTCAATCGAGAGCAGAGGAAGACTACCTCAGACAAATATTTCAGCAAACAC
GCAAAGGTAACAAAAAAATGTCAGATTATCTTCGTATCATGAAGTCACACGCTGATAATTTAGGGCAAACTAGTAGCCCTGTGTCCTTGAGAAATTTAATATCGCAGGTA
CTGTTAGGATTAGATGAAGAATTCAATCCGGTGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGTATCAAAGCAGACCACGACCAACGTCAACATCACCGGTGCAAATATGGTCACCGGAAATATCACAACATTCAGCAGTCCACCACTCAATCAACTACTCAACCAAAT
CACGACAATCAAGCTCGATCGAGGAAATTATCTACTGTGGAAGAATCTCGCCCTCCCGATTCTAAGGAGCTACAAGCTGGAAGGACACCTATTGGGGACGAAACCCTGTC
CTCCACAATACATTGCTCAGTCGACACCAGTCGTCAACCCAAATGCTACAACAGCAGAAAGAGGAGAATCCAGCACTAGAGCTCCATTCAGTGGAGCTTCTGAAACTACA
AGTCCTGCACTAACAATGGTATCTAATCCACTTTATGAGGCTTGGGTAACAACATACCAACTTCTATTGGGATGGTTGTACAACTCGATGACCGCTGAAGTTGCCACCCA
AGTGATGGGATACGAAAACACCATGGATCTCTGGGAAGCCATCACGGAGCTGTTTGGTCTTCAATCGAGAGCAGAGGAAGACTACCTCAGACAAATATTTCAGCAAACAC
GCAAAGGTAACAAAAAAATGTCAGATTATCTTCGTATCATGAAGTCACACGCTGATAATTTAGGGCAAACTAGTAGCCCTGTGTCCTTGAGAAATTTAATATCGCAGGTA
CTGTTAGGATTAGATGAAGAATTCAATCCGGTGTGA
Protein sequenceShow/hide protein sequence
MVSKQTTTNVNITGANMVTGNITTFSSPPLNQLLNQITTIKLDRGNYLLWKNLALPILRSYKLEGHLLGTKPCPPQYIAQSTPVVNPNATTAERGESSTRAPFSGASETT
SPALTMVSNPLYEAWVTTYQLLLGWLYNSMTAEVATQVMGYENTMDLWEAITELFGLQSRAEEDYLRQIFQQTRKGNKKMSDYLRIMKSHADNLGQTSSPVSLRNLISQV
LLGLDEEFNPV