; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0017820 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0017820
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionSWIM-type domain-containing protein
Genome locationchr5:9575077..9575923
RNA-Seq ExpressionLag0017820
SyntenyLag0017820
Gene Ontology termsGO:0009987 - cellular process (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR001878 - Zinc finger, CCHC-type
IPR006564 - Zinc finger, PMZ-type
IPR007527 - Zinc finger, SWIM-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYK09853.1 uncharacterized protein E5676_scaffold39G00210 [Cucumis melo var. makuwa]8.6e-5442.86Show/hide
Query:  QSFQCLDFEFQMRQLELDARGIRKELQTIGFSKWSRAYSTRRRYKIMTTNISESLNACMKEAKELPISSMLEVLRMMLQRWFFERRNEASFQATDFTKYT
        +++  L+FE+ MRQLE  +  +R EL+ +G  KW+RA+  R+RY+++TTNISES+ + +KE +ELP+  +LE +R ++Q+WF+ERR + SFQ T  + Y 
Subjt:  QSFQCLDFEFQMRQLELDARGIRKELQTIGFSKWSRAYSTRRRYKIMTTNISESLNACMKEAKELPISSMLEVLRMMLQRWFFERRNEASFQATDFTKYT

Query:  EKHLREEIEKGRTMQVNPVDNMQFQVIDGTSQYDVHLTTKRCSCRMWDILEIPCSHACAVLTTKHISIKEYTSNFYLSKTLSSIYSGLIHPLGHESSWII
        E  +RE + + R+M + PVD  +F+V     Q+ V++  + CSCR WD+  IPCSHAC  L+T+++++  YT  FY    L ++Y     P+G  +    
Subjt:  EKHLREEIEKGRTMQVNPVDNMQFQVIDGTSQYDVHLTTKRCSCRMWDILEIPCSHACAVLTTKHISIKEYTSNFYLSKTLSSIYSGLIHPLGHESSWII

Query:  PEDVKNIKIFPPNVKRSAGRPKKIRIPSQMEFKRRVKCGRCGRFGHNRKSCK
             N  I PP VKR AGRPKK R  S +E K  V+C RCG+ GHN +SCK
Subjt:  PEDVKNIKIFPPNVKRSAGRPKKIRIPSQMEFKRRVKCGRCGRFGHNRKSCK

TYK22587.1 uncharacterized protein E5676_scaffold195G00040 [Cucumis melo var. makuwa]3.3e-5342.86Show/hide
Query:  QSFQCLDFEFQMRQLELDARGIRKELQTIGFSKWSRAYSTRRRYKIMTTNISESLNACMKEAKELPISSMLEVLRMMLQRWFFERRNEASFQATDFTKYT
        +++  L+FE+ MRQLE  +  +R EL+ +G  KW+RA+  R+RY+++TTNISES+N+ +KE +ELP+  +LE +R ++Q+WF+ERR + SFQ T  + Y 
Subjt:  QSFQCLDFEFQMRQLELDARGIRKELQTIGFSKWSRAYSTRRRYKIMTTNISESLNACMKEAKELPISSMLEVLRMMLQRWFFERRNEASFQATDFTKYT

Query:  EKHLREEIEKGRTMQVNPVDNMQFQVIDGTSQYDVHLTTKRCSCRMWDILEIPCSHACAVLTTKHISIKEYTSNFYLSKTLSSIYSGLIHPLGHESSWII
        E  +RE + +  +M + PVD  +F+V     Q+ V++  + CSCR WD+  IPCSHAC  L+T+++++  YT  FY    L ++Y      +G  +    
Subjt:  EKHLREEIEKGRTMQVNPVDNMQFQVIDGTSQYDVHLTTKRCSCRMWDILEIPCSHACAVLTTKHISIKEYTSNFYLSKTLSSIYSGLIHPLGHESSWII

Query:  PEDVKNIKIFPPNVKRSAGRPKKIRIPSQMEFKRRVKCGRCGRFGHNRKSCK
             N  I PP VKR AGRPKK R  S +E K  V+C RCG+ GHN KSCK
Subjt:  PEDVKNIKIFPPNVKRSAGRPKKIRIPSQMEFKRRVKCGRCGRFGHNRKSCK

XP_008455803.1 PREDICTED: uncharacterized protein LOC103495899 [Cucumis melo]3.3e-5342.86Show/hide
Query:  QSFQCLDFEFQMRQLELDARGIRKELQTIGFSKWSRAYSTRRRYKIMTTNISESLNACMKEAKELPISSMLEVLRMMLQRWFFERRNEASFQATDFTKYT
        +++  L+FE+ MRQLE  +  +R EL+ +G  KW+RA+  R+RY+++TTNISES+N+ +KE +ELP+  +LE +R ++Q+WF+ERR + SFQ T  + Y 
Subjt:  QSFQCLDFEFQMRQLELDARGIRKELQTIGFSKWSRAYSTRRRYKIMTTNISESLNACMKEAKELPISSMLEVLRMMLQRWFFERRNEASFQATDFTKYT

Query:  EKHLREEIEKGRTMQVNPVDNMQFQVIDGTSQYDVHLTTKRCSCRMWDILEIPCSHACAVLTTKHISIKEYTSNFYLSKTLSSIYSGLIHPLGHESSWII
        E  +RE + +  +M + PVD  +F+V     Q+ V++  + CSCR WD+  IPCSHAC  L+T+++++  YT  FY    L ++Y      +G  +    
Subjt:  EKHLREEIEKGRTMQVNPVDNMQFQVIDGTSQYDVHLTTKRCSCRMWDILEIPCSHACAVLTTKHISIKEYTSNFYLSKTLSSIYSGLIHPLGHESSWII

Query:  PEDVKNIKIFPPNVKRSAGRPKKIRIPSQMEFKRRVKCGRCGRFGHNRKSCK
             N  I PP VKR AGRPKK R  S +E K  V+C RCG+ GHN KSCK
Subjt:  PEDVKNIKIFPPNVKRSAGRPKKIRIPSQMEFKRRVKCGRCGRFGHNRKSCK

XP_022134813.1 uncharacterized protein LOC111006994 [Momordica charantia]1.2e-5555.31Show/hide
Query:  QSFQCLDFEFQMRQLELDARGIRKELQTIGFSKWSRAYSTRRRYKIMTTNISESLNACMKEAKELPISSMLEVLRMMLQRWFFERRNEASFQATDFTKYT
        +++   DFE  MR L+   RGIR+EL  IGFSKWS A+S+  RY  MTTNISESLNA MK+A+ELPI+SMLEV+RMMLQRWF+ER+N A FQ T+FTK  
Subjt:  QSFQCLDFEFQMRQLELDARGIRKELQTIGFSKWSRAYSTRRRYKIMTTNISESLNACMKEAKELPISSMLEVLRMMLQRWFFERRNEASFQATDFTKYT

Query:  EKHLREEIEKGRTMQVNPVDNMQFQVIDGTSQYDVHLTTKRCSCRMWDILEIPCSHACAVLTTKHISIKEYTSNFYLSKTLSSIYSGLIHPLGHESSWII
        EK LRE+I  GRTM V  V+N  +QVID   Q + HL T                             K Y S +Y +  L S YSG IHPLGH+SSW I
Subjt:  EKHLREEIEKGRTMQVNPVDNMQFQVIDGTSQYDVHLTTKRCSCRMWDILEIPCSHACAVLTTKHISIKEYTSNFYLSKTLSSIYSGLIHPLGHESSWII

Query:  PEDVKNIKIFPPNVKRSAGRPKKIRI
        PEDVK IK+ PPNVKR AGRPKK+RI
Subjt:  PEDVKNIKIFPPNVKRSAGRPKKIRI

XP_022155207.1 uncharacterized protein LOC111022347 [Momordica charantia]2.8e-6055.98Show/hide
Query:  KELQTIGFSKWSRAYSTRRRYKIMTTNISESLNACMKEAKELPISSMLEVLRMMLQRWFFERRNEASFQATDFTKYTEKHLREEIEKGRTMQVNPVDNMQ
        +EL  IGFSKWS AYS   RY  MTTNIS+SLNA MK+A ELPI+SMLEV+RMMLQRWF++R+N+  FQ T FTK  E  L E+I   RTM+V  V+N  
Subjt:  KELQTIGFSKWSRAYSTRRRYKIMTTNISESLNACMKEAKELPISSMLEVLRMMLQRWFFERRNEASFQATDFTKYTEKHLREEIEKGRTMQVNPVDNMQ

Query:  FQVIDGTSQYDVHLTTKRCSCRMWDILEIPCSHACAVLTTKHISIKEYTSNFYLSKTLSSIYSGLIHPLGHESSWIIPEDVKNIKIFPPNVKRSAGRPKK
        +Q                                      KH+  K Y S++Y +  LSS YSG IHPLGH+SSW IPEDVK IK+  PNVKR AGRPKK
Subjt:  FQVIDGTSQYDVHLTTKRCSCRMWDILEIPCSHACAVLTTKHISIKEYTSNFYLSKTLSSIYSGLIHPLGHESSWIIPEDVKNIKIFPPNVKRSAGRPKK

Query:  IRIPSQMEFKRRVKCGRCGRFGHNRKSCKFSLTQ
        +RIPS +EFK+RVKC RCGR+GHNRKSCKFSLTQ
Subjt:  IRIPSQMEFKRRVKCGRCGRFGHNRKSCKFSLTQ

TrEMBL top hitse value%identityAlignment
A0A5A7SJA0 Uncharacterized protein1.6e-5342.86Show/hide
Query:  QSFQCLDFEFQMRQLELDARGIRKELQTIGFSKWSRAYSTRRRYKIMTTNISESLNACMKEAKELPISSMLEVLRMMLQRWFFERRNEASFQATDFTKYT
        +++  L+FE+ MRQLE  +  +R EL+ +G  KW+RA+  R+RY+++TTNISES+N+ +KE +ELP+  +LE +R ++Q+WF+ERR + SFQ T  + Y 
Subjt:  QSFQCLDFEFQMRQLELDARGIRKELQTIGFSKWSRAYSTRRRYKIMTTNISESLNACMKEAKELPISSMLEVLRMMLQRWFFERRNEASFQATDFTKYT

Query:  EKHLREEIEKGRTMQVNPVDNMQFQVIDGTSQYDVHLTTKRCSCRMWDILEIPCSHACAVLTTKHISIKEYTSNFYLSKTLSSIYSGLIHPLGHESSWII
        E  +RE + +  +M + PVD  +F+V     Q+ V++  + CSCR WD+  IPCSHAC  L+T+++++  YT  FY    L ++Y      +G  +    
Subjt:  EKHLREEIEKGRTMQVNPVDNMQFQVIDGTSQYDVHLTTKRCSCRMWDILEIPCSHACAVLTTKHISIKEYTSNFYLSKTLSSIYSGLIHPLGHESSWII

Query:  PEDVKNIKIFPPNVKRSAGRPKKIRIPSQMEFKRRVKCGRCGRFGHNRKSCK
             N  I PP VKR AGRPKK R  S +E K  V+C RCG+ GHN KSCK
Subjt:  PEDVKNIKIFPPNVKRSAGRPKKIRIPSQMEFKRRVKCGRCGRFGHNRKSCK

A0A5D3CDB8 Uncharacterized protein4.2e-5442.86Show/hide
Query:  QSFQCLDFEFQMRQLELDARGIRKELQTIGFSKWSRAYSTRRRYKIMTTNISESLNACMKEAKELPISSMLEVLRMMLQRWFFERRNEASFQATDFTKYT
        +++  L+FE+ MRQLE  +  +R EL+ +G  KW+RA+  R+RY+++TTNISES+ + +KE +ELP+  +LE +R ++Q+WF+ERR + SFQ T  + Y 
Subjt:  QSFQCLDFEFQMRQLELDARGIRKELQTIGFSKWSRAYSTRRRYKIMTTNISESLNACMKEAKELPISSMLEVLRMMLQRWFFERRNEASFQATDFTKYT

Query:  EKHLREEIEKGRTMQVNPVDNMQFQVIDGTSQYDVHLTTKRCSCRMWDILEIPCSHACAVLTTKHISIKEYTSNFYLSKTLSSIYSGLIHPLGHESSWII
        E  +RE + + R+M + PVD  +F+V     Q+ V++  + CSCR WD+  IPCSHAC  L+T+++++  YT  FY    L ++Y     P+G  +    
Subjt:  EKHLREEIEKGRTMQVNPVDNMQFQVIDGTSQYDVHLTTKRCSCRMWDILEIPCSHACAVLTTKHISIKEYTSNFYLSKTLSSIYSGLIHPLGHESSWII

Query:  PEDVKNIKIFPPNVKRSAGRPKKIRIPSQMEFKRRVKCGRCGRFGHNRKSCK
             N  I PP VKR AGRPKK R  S +E K  V+C RCG+ GHN +SCK
Subjt:  PEDVKNIKIFPPNVKRSAGRPKKIRIPSQMEFKRRVKCGRCGRFGHNRKSCK

A0A5D3DFW1 Uncharacterized protein1.6e-5342.86Show/hide
Query:  QSFQCLDFEFQMRQLELDARGIRKELQTIGFSKWSRAYSTRRRYKIMTTNISESLNACMKEAKELPISSMLEVLRMMLQRWFFERRNEASFQATDFTKYT
        +++  L+FE+ MRQLE  +  +R EL+ +G  KW+RA+  R+RY+++TTNISES+N+ +KE +ELP+  +LE +R ++Q+WF+ERR + SFQ T  + Y 
Subjt:  QSFQCLDFEFQMRQLELDARGIRKELQTIGFSKWSRAYSTRRRYKIMTTNISESLNACMKEAKELPISSMLEVLRMMLQRWFFERRNEASFQATDFTKYT

Query:  EKHLREEIEKGRTMQVNPVDNMQFQVIDGTSQYDVHLTTKRCSCRMWDILEIPCSHACAVLTTKHISIKEYTSNFYLSKTLSSIYSGLIHPLGHESSWII
        E  +RE + +  +M + PVD  +F+V     Q+ V++  + CSCR WD+  IPCSHAC  L+T+++++  YT  FY    L ++Y      +G  +    
Subjt:  EKHLREEIEKGRTMQVNPVDNMQFQVIDGTSQYDVHLTTKRCSCRMWDILEIPCSHACAVLTTKHISIKEYTSNFYLSKTLSSIYSGLIHPLGHESSWII

Query:  PEDVKNIKIFPPNVKRSAGRPKKIRIPSQMEFKRRVKCGRCGRFGHNRKSCK
             N  I PP VKR AGRPKK R  S +E K  V+C RCG+ GHN KSCK
Subjt:  PEDVKNIKIFPPNVKRSAGRPKKIRIPSQMEFKRRVKCGRCGRFGHNRKSCK

A0A6J1C328 uncharacterized protein LOC1110069945.8e-5655.31Show/hide
Query:  QSFQCLDFEFQMRQLELDARGIRKELQTIGFSKWSRAYSTRRRYKIMTTNISESLNACMKEAKELPISSMLEVLRMMLQRWFFERRNEASFQATDFTKYT
        +++   DFE  MR L+   RGIR+EL  IGFSKWS A+S+  RY  MTTNISESLNA MK+A+ELPI+SMLEV+RMMLQRWF+ER+N A FQ T+FTK  
Subjt:  QSFQCLDFEFQMRQLELDARGIRKELQTIGFSKWSRAYSTRRRYKIMTTNISESLNACMKEAKELPISSMLEVLRMMLQRWFFERRNEASFQATDFTKYT

Query:  EKHLREEIEKGRTMQVNPVDNMQFQVIDGTSQYDVHLTTKRCSCRMWDILEIPCSHACAVLTTKHISIKEYTSNFYLSKTLSSIYSGLIHPLGHESSWII
        EK LRE+I  GRTM V  V+N  +QVID   Q + HL T                             K Y S +Y +  L S YSG IHPLGH+SSW I
Subjt:  EKHLREEIEKGRTMQVNPVDNMQFQVIDGTSQYDVHLTTKRCSCRMWDILEIPCSHACAVLTTKHISIKEYTSNFYLSKTLSSIYSGLIHPLGHESSWII

Query:  PEDVKNIKIFPPNVKRSAGRPKKIRI
        PEDVK IK+ PPNVKR AGRPKK+RI
Subjt:  PEDVKNIKIFPPNVKRSAGRPKKIRI

A0A6J1DNQ8 uncharacterized protein LOC1110223471.3e-6055.98Show/hide
Query:  KELQTIGFSKWSRAYSTRRRYKIMTTNISESLNACMKEAKELPISSMLEVLRMMLQRWFFERRNEASFQATDFTKYTEKHLREEIEKGRTMQVNPVDNMQ
        +EL  IGFSKWS AYS   RY  MTTNIS+SLNA MK+A ELPI+SMLEV+RMMLQRWF++R+N+  FQ T FTK  E  L E+I   RTM+V  V+N  
Subjt:  KELQTIGFSKWSRAYSTRRRYKIMTTNISESLNACMKEAKELPISSMLEVLRMMLQRWFFERRNEASFQATDFTKYTEKHLREEIEKGRTMQVNPVDNMQ

Query:  FQVIDGTSQYDVHLTTKRCSCRMWDILEIPCSHACAVLTTKHISIKEYTSNFYLSKTLSSIYSGLIHPLGHESSWIIPEDVKNIKIFPPNVKRSAGRPKK
        +Q                                      KH+  K Y S++Y +  LSS YSG IHPLGH+SSW IPEDVK IK+  PNVKR AGRPKK
Subjt:  FQVIDGTSQYDVHLTTKRCSCRMWDILEIPCSHACAVLTTKHISIKEYTSNFYLSKTLSSIYSGLIHPLGHESSWIIPEDVKNIKIFPPNVKRSAGRPKK

Query:  IRIPSQMEFKRRVKCGRCGRFGHNRKSCKFSLTQ
        +RIPS +EFK+RVKC RCGR+GHNRKSCKFSLTQ
Subjt:  IRIPSQMEFKRRVKCGRCGRFGHNRKSCKFSLTQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G64260.1 MuDR family transposase7.9e-0521.56Show/hide
Query:  DFEFQMRQLELDARGIRKELQTIGFSKWSRAYSTRRRYKIMTTNISESLNACMKEAKELPISSMLEVLRMMLQ-RWFFERRNEASFQATD----FTKYTE
        +F+  M  ++       K L  I   KW+ A+ +  RY I+  +  E+L A  +      ++    V+ M  + R  F++   + + + +    +T+   
Subjt:  DFEFQMRQLELDARGIRKELQTIGFSKWSRAYSTRRRYKIMTTNISESLNACMKEAKELPISSMLEVLRMMLQ-RWFFERRNEASFQATD----FTKYTE

Query:  KHLREEIEKGRTMQVNPVDNMQFQVIDGT--SQYDVHLTTKRCSCRMWDILEIPCSHACAVLTTKHISIKEYTSNFYLSKTLSSIYSGLIHPLGHESSWI
          L E +       +  ++   F+V + +   ++ V L    C+CR +   + PC HA AV     I+  +Y    Y  +     Y+    P+   ++W 
Subjt:  KHLREEIEKGRTMQVNPVDNMQFQVIDGT--SQYDVHLTTKRCSCRMWDILEIPCSHACAVLTTKHISIKEYTSNFYLSKTLSSIYSGLIHPLGHESSWI

Query:  IPEDVKNIKIFPPNVKRS
         PED +   +FPP+ + S
Subjt:  IPEDVKNIKIFPPNVKRS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGCCAAAGCTTTCAATGTTTAGATTTTGAATTTCAGATGCGTCAGTTGGAGCTGGATGCTCGAGGTATCCGTAAGGAGTTGCAAACTATAGGCTTTTCCAAGTGGTC
TCGTGCTTATTCTACCCGACGACGATATAAGATAATGACCACGAACATATCTGAGTCTTTAAATGCTTGCATGAAGGAAGCAAAAGAGTTACCTATTTCATCTATGTTGG
AAGTTTTACGAATGATGCTACAAAGATGGTTCTTTGAAAGACGGAATGAAGCATCTTTTCAAGCAACAGATTTTACTAAATATACTGAGAAACATTTAAGAGAAGAAATA
GAGAAGGGTCGAACAATGCAGGTAAATCCAGTTGACAATATGCAATTTCAAGTGATCGATGGGACGAGTCAATATGATGTTCACTTAACAACCAAGAGGTGTAGTTGTCG
GATGTGGGACATCTTGGAAATTCCGTGTTCTCATGCATGTGCTGTGTTGACAACTAAGCATATATCCATCAAGGAGTATACATCAAACTTCTACCTTAGCAAGACTTTAT
CTTCTATATACAGTGGCTTAATTCATCCATTAGGACATGAGTCTAGCTGGATTATTCCCGAAGATGTAAAGAACATCAAAATTTTTCCACCCAACGTGAAGCGTTCTGCT
GGAAGGCCGAAGAAGATCAGGATCCCTTCCCAAATGGAATTCAAGAGGCGTGTGAAATGTGGTCGTTGTGGACGATTTGGGCACAATCGGAAATCTTGCAAATTTTCCCT
TACCCAATGA
mRNA sequenceShow/hide mRNA sequence
ATGTGCCAAAGCTTTCAATGTTTAGATTTTGAATTTCAGATGCGTCAGTTGGAGCTGGATGCTCGAGGTATCCGTAAGGAGTTGCAAACTATAGGCTTTTCCAAGTGGTC
TCGTGCTTATTCTACCCGACGACGATATAAGATAATGACCACGAACATATCTGAGTCTTTAAATGCTTGCATGAAGGAAGCAAAAGAGTTACCTATTTCATCTATGTTGG
AAGTTTTACGAATGATGCTACAAAGATGGTTCTTTGAAAGACGGAATGAAGCATCTTTTCAAGCAACAGATTTTACTAAATATACTGAGAAACATTTAAGAGAAGAAATA
GAGAAGGGTCGAACAATGCAGGTAAATCCAGTTGACAATATGCAATTTCAAGTGATCGATGGGACGAGTCAATATGATGTTCACTTAACAACCAAGAGGTGTAGTTGTCG
GATGTGGGACATCTTGGAAATTCCGTGTTCTCATGCATGTGCTGTGTTGACAACTAAGCATATATCCATCAAGGAGTATACATCAAACTTCTACCTTAGCAAGACTTTAT
CTTCTATATACAGTGGCTTAATTCATCCATTAGGACATGAGTCTAGCTGGATTATTCCCGAAGATGTAAAGAACATCAAAATTTTTCCACCCAACGTGAAGCGTTCTGCT
GGAAGGCCGAAGAAGATCAGGATCCCTTCCCAAATGGAATTCAAGAGGCGTGTGAAATGTGGTCGTTGTGGACGATTTGGGCACAATCGGAAATCTTGCAAATTTTCCCT
TACCCAATGA
Protein sequenceShow/hide protein sequence
MCQSFQCLDFEFQMRQLELDARGIRKELQTIGFSKWSRAYSTRRRYKIMTTNISESLNACMKEAKELPISSMLEVLRMMLQRWFFERRNEASFQATDFTKYTEKHLREEI
EKGRTMQVNPVDNMQFQVIDGTSQYDVHLTTKRCSCRMWDILEIPCSHACAVLTTKHISIKEYTSNFYLSKTLSSIYSGLIHPLGHESSWIIPEDVKNIKIFPPNVKRSA
GRPKKIRIPSQMEFKRRVKCGRCGRFGHNRKSCKFSLTQ