; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0017825 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0017825
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionProtein RAE1
Genome locationchr5:9676704..9678912
RNA-Seq ExpressionLag0017825
SyntenyLag0017825
Gene Ontology termsGO:0005515 - protein binding (molecular function)
InterPro domainsIPR036322 - WD40-repeat-containing domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
OEL16987.1 Activating molecule in BECN1-regulated autophagy protein 1, partial [Dichanthelium oligosanthes]8.5e-2351.28Show/hide
Query:  LEIPNVILNDLGSILRSKEIKAGFSVSAIQFSPTSDHILVAYGKRHKSLILS---QESNERPSYTILEIYRVSDMQVVRSIDCGDDMMIERACFHPNPGE
        L I + +L   G IL S+ I+A   +++IQFSPTS+HIL+AYG+RH SL+ S   +  N  P YTILE+YRVSDM++VR +   +D  +  ACFHP+PG 
Subjt:  LEIPNVILNDLGSILRSKEIKAGFSVSAIQFSPTSDHILVAYGKRHKSLILS---QESNERPSYTILEIYRVSDMQVVRSIDCGDDMMIERACFHPNPGE

Query:  GIVYGTTNGDTVALQHN
        G+VYGT  G    LQHN
Subjt:  GIVYGTTNGDTVALQHN

PWZ45516.1 Activating molecule in BECN1-regulated autophagy protein 1 [Zea mays]3.8e-2345.65Show/hide
Query:  VRIWKFDATDRFILRD---LYLEIPNVILNDLGSILRSKEIKAGFSVSAIQFSPTSDHILVAYGKRHKSLILS---QESNERPSYTILEIYRVSDMQVVR
        +RIW+    +  +  +     L I + +L   G IL S+ I+A   +++IQFSPTS+HIL+AYG+RH SL+ S   +  N  P YTILE+YRVSDM++VR
Subjt:  VRIWKFDATDRFILRD---LYLEIPNVILNDLGSILRSKEIKAGFSVSAIQFSPTSDHILVAYGKRHKSLILS---QESNERPSYTILEIYRVSDMQVVR

Query:  SIDCGDDMMIERACFHPNPGEGIVYGTTNGDTVALQHN
         +   +D  +  ACFHP+PG G+VYGT  G    LQHN
Subjt:  SIDCGDDMMIERACFHPNPGEGIVYGTTNGDTVALQHN

RLM86516.1 hypothetical protein C2845_PM04G16230 [Panicum miliaceum]5.9e-2440.61Show/hide
Query:  FLINSQATFDWLDVGV-------VRIWKFDATDRFILRD---LYLEIPNVILNDLGSILRSKEIKAGFSVSAIQFSPTSDHILVAYGKRHKSL---ILSQ
        F + S+     LD G        +RIW+ D  D FI  +     L IP+V+L   G++L S+ +KA   ++++QFSPTS+HIL+AYG+ H SL   IL  
Subjt:  FLINSQATFDWLDVGV-------VRIWKFDATDRFILRD---LYLEIPNVILNDLGSILRSKEIKAGFSVSAIQFSPTSDHILVAYGKRHKSL---ILSQ

Query:  ESNERPSYTILEIYRVSDMQVVRSI-DCGDDMMIERACFHPNPGEGIVYGTTNGDTVALQHNPKK
             P Y +LE+YRVSDM++VR +   GD++ +  ACFHP+PG G+VYGT  G+    + +P +
Subjt:  ESNERPSYTILEIYRVSDMQVVRSI-DCGDDMMIERACFHPNPGEGIVYGTTNGDTVALQHNPKK

TVU32442.1 hypothetical protein EJB05_24173 [Eragrostis curvula]4.2e-2252.34Show/hide
Query:  GSILRSKEIKAGFSVSAIQFSPTSDHILVAYGKRH----KSLILSQESNERPSYTILEIYRVSDMQVVRSIDCGDDMMIERACFHPNPGEGIVYGTTNGD
        G IL S+ I+A   +++IQFSPTS+HIL+AYG+RH    +S ++ ++SN  P YTILE+YRVSDM++VR +   +D  +  ACFHP+PG GIVYGT  G 
Subjt:  GSILRSKEIKAGFSVSAIQFSPTSDHILVAYGKRH----KSLILSQESNERPSYTILEIYRVSDMQVVRSIDCGDDMMIERACFHPNPGEGIVYGTTNGD

Query:  TVALQHN
           LQH+
Subjt:  TVALQHN

TVU32451.1 hypothetical protein EJB05_24182, partial [Eragrostis curvula]4.2e-2252.34Show/hide
Query:  GSILRSKEIKAGFSVSAIQFSPTSDHILVAYGKRH----KSLILSQESNERPSYTILEIYRVSDMQVVRSIDCGDDMMIERACFHPNPGEGIVYGTTNGD
        G IL S+ I+A   +++IQFSPTS+HIL+AYG+RH    +S ++ ++SN  P YTILE+YRVSDM++VR +   +D  +  ACFHP+PG GIVYGT  G 
Subjt:  GSILRSKEIKAGFSVSAIQFSPTSDHILVAYGKRH----KSLILSQESNERPSYTILEIYRVSDMQVVRSIDCGDDMMIERACFHPNPGEGIVYGTTNGD

Query:  TVALQHN
           LQH+
Subjt:  TVALQHN

TrEMBL top hitse value%identityAlignment
A0A1E5UVT5 Activating molecule in BECN1-regulated autophagy protein 1 (Fragment)4.1e-2351.28Show/hide
Query:  LEIPNVILNDLGSILRSKEIKAGFSVSAIQFSPTSDHILVAYGKRHKSLILS---QESNERPSYTILEIYRVSDMQVVRSIDCGDDMMIERACFHPNPGE
        L I + +L   G IL S+ I+A   +++IQFSPTS+HIL+AYG+RH SL+ S   +  N  P YTILE+YRVSDM++VR +   +D  +  ACFHP+PG 
Subjt:  LEIPNVILNDLGSILRSKEIKAGFSVSAIQFSPTSDHILVAYGKRHKSLILS---QESNERPSYTILEIYRVSDMQVVRSIDCGDDMMIERACFHPNPGE

Query:  GIVYGTTNGDTVALQHN
        G+VYGT  G    LQHN
Subjt:  GIVYGTTNGDTVALQHN

A0A3L6GAV7 Activating molecule in BECN1-regulated autophagy protein 11.8e-2345.65Show/hide
Query:  VRIWKFDATDRFILRD---LYLEIPNVILNDLGSILRSKEIKAGFSVSAIQFSPTSDHILVAYGKRHKSLILS---QESNERPSYTILEIYRVSDMQVVR
        +RIW+    +  +  +     L I + +L   G IL S+ I+A   +++IQFSPTS+HIL+AYG+RH SL+ S   +  N  P YTILE+YRVSDM++VR
Subjt:  VRIWKFDATDRFILRD---LYLEIPNVILNDLGSILRSKEIKAGFSVSAIQFSPTSDHILVAYGKRHKSLILS---QESNERPSYTILEIYRVSDMQVVR

Query:  SIDCGDDMMIERACFHPNPGEGIVYGTTNGDTVALQHN
         +   +D  +  ACFHP+PG G+VYGT  G    LQHN
Subjt:  SIDCGDDMMIERACFHPNPGEGIVYGTTNGDTVALQHN

A0A3L6QSX9 Uncharacterized protein2.8e-2440.61Show/hide
Query:  FLINSQATFDWLDVGV-------VRIWKFDATDRFILRD---LYLEIPNVILNDLGSILRSKEIKAGFSVSAIQFSPTSDHILVAYGKRHKSL---ILSQ
        F + S+     LD G        +RIW+ D  D FI  +     L IP+V+L   G++L S+ +KA   ++++QFSPTS+HIL+AYG+ H SL   IL  
Subjt:  FLINSQATFDWLDVGV-------VRIWKFDATDRFILRD---LYLEIPNVILNDLGSILRSKEIKAGFSVSAIQFSPTSDHILVAYGKRHKSL---ILSQ

Query:  ESNERPSYTILEIYRVSDMQVVRSI-DCGDDMMIERACFHPNPGEGIVYGTTNGDTVALQHNPKK
             P Y +LE+YRVSDM++VR +   GD++ +  ACFHP+PG G+VYGT  G+    + +P +
Subjt:  ESNERPSYTILEIYRVSDMQVVRSI-DCGDDMMIERACFHPNPGEGIVYGTTNGDTVALQHNPKK

A0A5J9V869 WD_REPEATS_REGION domain-containing protein2.0e-2252.34Show/hide
Query:  GSILRSKEIKAGFSVSAIQFSPTSDHILVAYGKRH----KSLILSQESNERPSYTILEIYRVSDMQVVRSIDCGDDMMIERACFHPNPGEGIVYGTTNGD
        G IL S+ I+A   +++IQFSPTS+HIL+AYG+RH    +S ++ ++SN  P YTILE+YRVSDM++VR +   +D  +  ACFHP+PG GIVYGT  G 
Subjt:  GSILRSKEIKAGFSVSAIQFSPTSDHILVAYGKRH----KSLILSQESNERPSYTILEIYRVSDMQVVRSIDCGDDMMIERACFHPNPGEGIVYGTTNGD

Query:  TVALQHN
           LQH+
Subjt:  TVALQHN

A0A5J9VAC5 WD_REPEATS_REGION domain-containing protein (Fragment)2.0e-2252.34Show/hide
Query:  GSILRSKEIKAGFSVSAIQFSPTSDHILVAYGKRH----KSLILSQESNERPSYTILEIYRVSDMQVVRSIDCGDDMMIERACFHPNPGEGIVYGTTNGD
        G IL S+ I+A   +++IQFSPTS+HIL+AYG+RH    +S ++ ++SN  P YTILE+YRVSDM++VR +   +D  +  ACFHP+PG GIVYGT  G 
Subjt:  GSILRSKEIKAGFSVSAIQFSPTSDHILVAYGKRH----KSLILSQESNERPSYTILEIYRVSDMQVVRSIDCGDDMMIERACFHPNPGEGIVYGTTNGD

Query:  TVALQHN
           LQH+
Subjt:  TVALQHN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G04140.1 Transducin family protein / WD-40 repeat family protein9.0e-2345.3Show/hide
Query:  LEIPNVILNDLGSILRSKEIKAGFSVSAIQFSPTSDHILVAYGKRHKSLILSQESNERPS---YTILEIYRVSDMQVVRSIDCGDDMMIERACFHPNPGE
        L + ++     GS+L S+ I+A   +++IQFSPTS+HIL+AYG+RH SL+ S  S+   +   +T+LEIYRVSDM++VR +   +D  +  ACFHP+PG 
Subjt:  LEIPNVILNDLGSILRSKEIKAGFSVSAIQFSPTSDHILVAYGKRHKSLILSQESNERPS---YTILEIYRVSDMQVVRSIDCGDDMMIERACFHPNPGE

Query:  GIVYGTTNGDTVALQHN
        G+VYGT  G     ++N
Subjt:  GIVYGTTNGDTVALQHN

AT5G43930.1 Transducin family protein / WD-40 repeat family protein3.1e-2346.15Show/hide
Query:  LEIPNVILNDLGSILRSKEIKAGFSVSAIQFSPTSDHILVAYGKRHKSLILSQESNERPS---YTILEIYRVSDMQVVRSIDCGDDMMIERACFHPNPGE
        L + ++     GS+L S+ I+A   +++IQFSPTS+HIL+AYG+RH SL+ S  S+   +   +T+LEIYRVSDM++VR +   +D  +  ACFHP+PG 
Subjt:  LEIPNVILNDLGSILRSKEIKAGFSVSAIQFSPTSDHILVAYGKRHKSLILSQESNERPS---YTILEIYRVSDMQVVRSIDCGDDMMIERACFHPNPGE

Query:  GIVYGTTNGDTVALQHN
        G+VYGT  G     Q+N
Subjt:  GIVYGTTNGDTVALQHN

AT5G43930.2 Transducin family protein / WD-40 repeat family protein3.1e-2346.15Show/hide
Query:  LEIPNVILNDLGSILRSKEIKAGFSVSAIQFSPTSDHILVAYGKRHKSLILSQESNERPS---YTILEIYRVSDMQVVRSIDCGDDMMIERACFHPNPGE
        L + ++     GS+L S+ I+A   +++IQFSPTS+HIL+AYG+RH SL+ S  S+   +   +T+LEIYRVSDM++VR +   +D  +  ACFHP+PG 
Subjt:  LEIPNVILNDLGSILRSKEIKAGFSVSAIQFSPTSDHILVAYGKRHKSLILSQESNERPS---YTILEIYRVSDMQVVRSIDCGDDMMIERACFHPNPGE

Query:  GIVYGTTNGDTVALQHN
        G+VYGT  G     Q+N
Subjt:  GIVYGTTNGDTVALQHN

AT5G43930.3 Transducin family protein / WD-40 repeat family protein3.1e-2346.15Show/hide
Query:  LEIPNVILNDLGSILRSKEIKAGFSVSAIQFSPTSDHILVAYGKRHKSLILSQESNERPS---YTILEIYRVSDMQVVRSIDCGDDMMIERACFHPNPGE
        L + ++     GS+L S+ I+A   +++IQFSPTS+HIL+AYG+RH SL+ S  S+   +   +T+LEIYRVSDM++VR +   +D  +  ACFHP+PG 
Subjt:  LEIPNVILNDLGSILRSKEIKAGFSVSAIQFSPTSDHILVAYGKRHKSLILSQESNERPS---YTILEIYRVSDMQVVRSIDCGDDMMIERACFHPNPGE

Query:  GIVYGTTNGDTVALQHN
        G+VYGT  G     Q+N
Subjt:  GIVYGTTNGDTVALQHN

AT5G43930.4 Transducin family protein / WD-40 repeat family protein3.1e-2346.15Show/hide
Query:  LEIPNVILNDLGSILRSKEIKAGFSVSAIQFSPTSDHILVAYGKRHKSLILSQESNERPS---YTILEIYRVSDMQVVRSIDCGDDMMIERACFHPNPGE
        L + ++     GS+L S+ I+A   +++IQFSPTS+HIL+AYG+RH SL+ S  S+   +   +T+LEIYRVSDM++VR +   +D  +  ACFHP+PG 
Subjt:  LEIPNVILNDLGSILRSKEIKAGFSVSAIQFSPTSDHILVAYGKRHKSLILSQESNERPS---YTILEIYRVSDMQVVRSIDCGDDMMIERACFHPNPGE

Query:  GIVYGTTNGDTVALQHN
        G+VYGT  G     Q+N
Subjt:  GIVYGTTNGDTVALQHN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCGAGAACGATGGAGAAAAACCCAAGTCGAGCACCTTGCGGAAAGCTGCTCGAGGAAGAAAGAGGCGACGGCTGGACGGCGCTCGAAGGGGAAGGCGGCAACATCGTG
GGGAGACGACGGTGTGAGGTGGCTGGGCAGCGTGAGGGCAGCAGGCGATGACGGAGGAAAGCGGGGTGAAGGGCGTGGTGCTATAGAGAATCACCAAATACTAACCACTG
ATGAGAGGTTTCTAAAACTCCAATTCAATCCATTGGGTCTGTCGTACTTATTGACGGTAGAGTATGATATACATTTCCAACCTAGCCTTCTAATAAGAGGATTCAATGGT
ACAGAGCAAAGTGACATATTGTTAACTAGCAGAGATGAAAGCCTCAACTTATTCCTGATCAACTCTCAAGCTACATTTGACTGGTTGGATGTCGGGGTTGTAAGAATATG
GAAATTCGATGCTACAGATCGCTTTATCCTTAGAGATTTGTATCTAGAGATACCAAACGTGATTTTGAACGATCTTGGTTCCATTCTAAGAAGTAAAGAGATAAAAGCTG
GTTTTAGCGTGAGCGCAATCCAGTTCTCCCCGACCTCGGACCATATATTAGTGGCATATGGCAAAAGACATAAGTCCCTAATTTTGAGTCAGGAAAGTAATGAACGGCCG
AGTTATACTATCCTGGAGATTTATAGGGTTTCTGATATGCAAGTTGTGAGGAGCATTGATTGTGGGGATGACATGATGATCGAAAGGGCGTGTTTTCATCCCAATCCTGG
AGAAGGCATAGTTTACGGAACAACGAATGGCGACACTGTAGCCCTCCAACATAACCCAAAAAAAGAAGACTAG
mRNA sequenceShow/hide mRNA sequence
ATGCGAGAACGATGGAGAAAAACCCAAGTCGAGCACCTTGCGGAAAGCTGCTCGAGGAAGAAAGAGGCGACGGCTGGACGGCGCTCGAAGGGGAAGGCGGCAACATCGTG
GGGAGACGACGGTGTGAGGTGGCTGGGCAGCGTGAGGGCAGCAGGCGATGACGGAGGAAAGCGGGGTGAAGGGCGTGGTGCTATAGAGAATCACCAAATACTAACCACTG
ATGAGAGGTTTCTAAAACTCCAATTCAATCCATTGGGTCTGTCGTACTTATTGACGGTAGAGTATGATATACATTTCCAACCTAGCCTTCTAATAAGAGGATTCAATGGT
ACAGAGCAAAGTGACATATTGTTAACTAGCAGAGATGAAAGCCTCAACTTATTCCTGATCAACTCTCAAGCTACATTTGACTGGTTGGATGTCGGGGTTGTAAGAATATG
GAAATTCGATGCTACAGATCGCTTTATCCTTAGAGATTTGTATCTAGAGATACCAAACGTGATTTTGAACGATCTTGGTTCCATTCTAAGAAGTAAAGAGATAAAAGCTG
GTTTTAGCGTGAGCGCAATCCAGTTCTCCCCGACCTCGGACCATATATTAGTGGCATATGGCAAAAGACATAAGTCCCTAATTTTGAGTCAGGAAAGTAATGAACGGCCG
AGTTATACTATCCTGGAGATTTATAGGGTTTCTGATATGCAAGTTGTGAGGAGCATTGATTGTGGGGATGACATGATGATCGAAAGGGCGTGTTTTCATCCCAATCCTGG
AGAAGGCATAGTTTACGGAACAACGAATGGCGACACTGTAGCCCTCCAACATAACCCAAAAAAAGAAGACTAG
Protein sequenceShow/hide protein sequence
MRERWRKTQVEHLAESCSRKKEATAGRRSKGKAATSWGDDGVRWLGSVRAAGDDGGKRGEGRGAIENHQILTTDERFLKLQFNPLGLSYLLTVEYDIHFQPSLLIRGFNG
TEQSDILLTSRDESLNLFLINSQATFDWLDVGVVRIWKFDATDRFILRDLYLEIPNVILNDLGSILRSKEIKAGFSVSAIQFSPTSDHILVAYGKRHKSLILSQESNERP
SYTILEIYRVSDMQVVRSIDCGDDMMIERACFHPNPGEGIVYGTTNGDTVALQHNPKKED