; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0017830 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0017830
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Descriptionnuclear pore complex protein NUP1-like
Genome locationchr5:9731175..9733150
RNA-Seq ExpressionLag0017830
SyntenyLag0017830
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6587893.1 Nuclear pore complex protein NUP1, partial [Cucurbita argyrosperma subsp. sororia]1.4e-6370.16Show/hide
Query:  LNEVGASPVDIARAYMSNRKCEPGLLSDKIPDDERALLHGDHQMSKPFIPSMSPNPSTCWPGAMSESQCGYLTPRSQRGRFGLHNFPRTPYSRSIFSKSK
        LN VGASPVDIARAYMSNRK EPGLLSDKIPDDER LL+GDHQMSKPFIP MSPNPSTCWPGAMSESQ  YLTPRSQRGRFG HNFPRTPYSRSIFSKSK
Subjt:  LNEVGASPVDIARAYMSNRKCEPGLLSDKIPDDERALLHGDHQMSKPFIPSMSPNPSTCWPGAMSESQCGYLTPRSQRGRFGLHNFPRTPYSRSIFSKSK

Query:  SKLTQLQGDVQKFVNTPSPLWQQSRTPAYAQNIIPPDVYNLMYILSLLGLVATGPGRIMGRLNVNVLQDLEVMLSKIVKEAEAILEELNPS
        SKLTQLQGD QKFVNTPSPLWQQSRTPAY+Q     D ++        G +  GP R +GR    V            ++AE  +E  N S
Subjt:  SKLTQLQGDVQKFVNTPSPLWQQSRTPAYAQNIIPPDVYNLMYILSLLGLVATGPGRIMGRLNVNVLQDLEVMLSKIVKEAEAILEELNPS

KAG7021778.1 Nuclear pore complex protein NUP1 [Cucurbita argyrosperma subsp. argyrosperma]1.4e-6370.16Show/hide
Query:  LNEVGASPVDIARAYMSNRKCEPGLLSDKIPDDERALLHGDHQMSKPFIPSMSPNPSTCWPGAMSESQCGYLTPRSQRGRFGLHNFPRTPYSRSIFSKSK
        LN VGASPVDIARAYMSNRK EPGLLSDKIPDDER LL+GDHQMSKPFIP MSPNPSTCWPGAMSESQ  YLTPRSQRGRFG HNFPRTPYSRSIFSKSK
Subjt:  LNEVGASPVDIARAYMSNRKCEPGLLSDKIPDDERALLHGDHQMSKPFIPSMSPNPSTCWPGAMSESQCGYLTPRSQRGRFGLHNFPRTPYSRSIFSKSK

Query:  SKLTQLQGDVQKFVNTPSPLWQQSRTPAYAQNIIPPDVYNLMYILSLLGLVATGPGRIMGRLNVNVLQDLEVMLSKIVKEAEAILEELNPS
        SKLTQLQGD QKFVNTPSPLWQQSRTPAY+Q     D ++        G +  GP R +GR    V            ++AE  +E  N S
Subjt:  SKLTQLQGDVQKFVNTPSPLWQQSRTPAYAQNIIPPDVYNLMYILSLLGLVATGPGRIMGRLNVNVLQDLEVMLSKIVKEAEAILEELNPS

XP_022929707.1 nuclear pore complex protein NUP1-like [Cucurbita moschata]1.4e-6370.16Show/hide
Query:  LNEVGASPVDIARAYMSNRKCEPGLLSDKIPDDERALLHGDHQMSKPFIPSMSPNPSTCWPGAMSESQCGYLTPRSQRGRFGLHNFPRTPYSRSIFSKSK
        LN VGASPVDIARAYMSNRK EPGLLSDKIPDDER LL+GDHQMSKPFIP MSPNPSTCWPGAMSESQ  YLTPRSQRGRFG HNFPRTPYSRSIFSKSK
Subjt:  LNEVGASPVDIARAYMSNRKCEPGLLSDKIPDDERALLHGDHQMSKPFIPSMSPNPSTCWPGAMSESQCGYLTPRSQRGRFGLHNFPRTPYSRSIFSKSK

Query:  SKLTQLQGDVQKFVNTPSPLWQQSRTPAYAQNIIPPDVYNLMYILSLLGLVATGPGRIMGRLNVNVLQDLEVMLSKIVKEAEAILEELNPS
        SKLTQLQGD QKFVNTPSPLWQQSRTPAY+Q     D ++        G +  GP R +GR    V            ++AE  +E  N S
Subjt:  SKLTQLQGDVQKFVNTPSPLWQQSRTPAYAQNIIPPDVYNLMYILSLLGLVATGPGRIMGRLNVNVLQDLEVMLSKIVKEAEAILEELNPS

XP_023529547.1 nuclear pore complex protein NUP1-like isoform X1 [Cucurbita pepo subsp. pepo]1.4e-6370.16Show/hide
Query:  LNEVGASPVDIARAYMSNRKCEPGLLSDKIPDDERALLHGDHQMSKPFIPSMSPNPSTCWPGAMSESQCGYLTPRSQRGRFGLHNFPRTPYSRSIFSKSK
        LN VGASPVDIARAYMSNRK EPGLLSDKIPDDER LL+GDHQMSKPFIP MSPNPSTCWPGAMSESQ  YLTPRSQRGRFG HNFPRTPYSRSIFSKSK
Subjt:  LNEVGASPVDIARAYMSNRKCEPGLLSDKIPDDERALLHGDHQMSKPFIPSMSPNPSTCWPGAMSESQCGYLTPRSQRGRFGLHNFPRTPYSRSIFSKSK

Query:  SKLTQLQGDVQKFVNTPSPLWQQSRTPAYAQNIIPPDVYNLMYILSLLGLVATGPGRIMGRLNVNVLQDLEVMLSKIVKEAEAILEELNPS
        SKLTQLQGD QKFVNTPSPLWQQSRTPAY+Q     D ++        G +  GP R +GR    V            ++AE  +E  N S
Subjt:  SKLTQLQGDVQKFVNTPSPLWQQSRTPAYAQNIIPPDVYNLMYILSLLGLVATGPGRIMGRLNVNVLQDLEVMLSKIVKEAEAILEELNPS

XP_023529548.1 nuclear pore complex protein NUP1-like isoform X2 [Cucurbita pepo subsp. pepo]1.4e-6370.16Show/hide
Query:  LNEVGASPVDIARAYMSNRKCEPGLLSDKIPDDERALLHGDHQMSKPFIPSMSPNPSTCWPGAMSESQCGYLTPRSQRGRFGLHNFPRTPYSRSIFSKSK
        LN VGASPVDIARAYMSNRK EPGLLSDKIPDDER LL+GDHQMSKPFIP MSPNPSTCWPGAMSESQ  YLTPRSQRGRFG HNFPRTPYSRSIFSKSK
Subjt:  LNEVGASPVDIARAYMSNRKCEPGLLSDKIPDDERALLHGDHQMSKPFIPSMSPNPSTCWPGAMSESQCGYLTPRSQRGRFGLHNFPRTPYSRSIFSKSK

Query:  SKLTQLQGDVQKFVNTPSPLWQQSRTPAYAQNIIPPDVYNLMYILSLLGLVATGPGRIMGRLNVNVLQDLEVMLSKIVKEAEAILEELNPS
        SKLTQLQGD QKFVNTPSPLWQQSRTPAY+Q     D ++        G +  GP R +GR    V            ++AE  +E  N S
Subjt:  SKLTQLQGDVQKFVNTPSPLWQQSRTPAYAQNIIPPDVYNLMYILSLLGLVATGPGRIMGRLNVNVLQDLEVMLSKIVKEAEAILEELNPS

TrEMBL top hitse value%identityAlignment
A0A1S3B9A7 nuclear pore complex protein NUP1 isoform X32.6e-6083.69Show/hide
Query:  KKLNEVGASPVDIARAYMSNRKCEPGLLSDKIPDDERALLHGDHQMSKPFIPSMSPNPSTCWPGAMSESQCGYLTPRSQR-GRFGLHNFPRTPYSRSIFS
        +KL +VGASPVDIARAYM+NRK EPGLLSDKIPD+ R L+HGDHQMSKPFIPSMSP+PSTCWPGAMSESQ GYLTPRSQR GRFGLH+FPRTPYSRSIFS
Subjt:  KKLNEVGASPVDIARAYMSNRKCEPGLLSDKIPDDERALLHGDHQMSKPFIPSMSPNPSTCWPGAMSESQCGYLTPRSQR-GRFGLHNFPRTPYSRSIFS

Query:  KSKSKLTQLQGDVQKFVNTPSPLWQQSRTPAYAQNIIPPDV
        K KSKLTQLQGD QKFV TP+PLWQQSRTPAY+Q I   D+
Subjt:  KSKSKLTQLQGDVQKFVNTPSPLWQQSRTPAYAQNIIPPDV

A0A1S3BA46 nuclear pore complex protein NUP1 isoform X12.6e-6083.69Show/hide
Query:  KKLNEVGASPVDIARAYMSNRKCEPGLLSDKIPDDERALLHGDHQMSKPFIPSMSPNPSTCWPGAMSESQCGYLTPRSQR-GRFGLHNFPRTPYSRSIFS
        +KL +VGASPVDIARAYM+NRK EPGLLSDKIPD+ R L+HGDHQMSKPFIPSMSP+PSTCWPGAMSESQ GYLTPRSQR GRFGLH+FPRTPYSRSIFS
Subjt:  KKLNEVGASPVDIARAYMSNRKCEPGLLSDKIPDDERALLHGDHQMSKPFIPSMSPNPSTCWPGAMSESQCGYLTPRSQR-GRFGLHNFPRTPYSRSIFS

Query:  KSKSKLTQLQGDVQKFVNTPSPLWQQSRTPAYAQNIIPPDV
        K KSKLTQLQGD QKFV TP+PLWQQSRTPAY+Q I   D+
Subjt:  KSKSKLTQLQGDVQKFVNTPSPLWQQSRTPAYAQNIIPPDV

A0A6J1ENH0 nuclear pore complex protein NUP1-like6.7e-6470.16Show/hide
Query:  LNEVGASPVDIARAYMSNRKCEPGLLSDKIPDDERALLHGDHQMSKPFIPSMSPNPSTCWPGAMSESQCGYLTPRSQRGRFGLHNFPRTPYSRSIFSKSK
        LN VGASPVDIARAYMSNRK EPGLLSDKIPDDER LL+GDHQMSKPFIP MSPNPSTCWPGAMSESQ  YLTPRSQRGRFG HNFPRTPYSRSIFSKSK
Subjt:  LNEVGASPVDIARAYMSNRKCEPGLLSDKIPDDERALLHGDHQMSKPFIPSMSPNPSTCWPGAMSESQCGYLTPRSQRGRFGLHNFPRTPYSRSIFSKSK

Query:  SKLTQLQGDVQKFVNTPSPLWQQSRTPAYAQNIIPPDVYNLMYILSLLGLVATGPGRIMGRLNVNVLQDLEVMLSKIVKEAEAILEELNPS
        SKLTQLQGD QKFVNTPSPLWQQSRTPAY+Q     D ++        G +  GP R +GR    V            ++AE  +E  N S
Subjt:  SKLTQLQGDVQKFVNTPSPLWQQSRTPAYAQNIIPPDVYNLMYILSLLGLVATGPGRIMGRLNVNVLQDLEVMLSKIVKEAEAILEELNPS

A0A6J1I4G8 nuclear pore complex protein NUP1-like isoform X11.8e-6163.27Show/hide
Query:  LNEVGASPVDIARAYMSNRKCEPGLLSDKIPDDERALLHGDHQMSKPFIPSMSPNPSTCWPGAMSESQCGYLTPRSQRGRFGLHNFPRTPYSRSIFSKSK
        LN VGASPVDIARAYMSNRK EPGLLSDKIPDDER LL+GDHQMSK FIP MSPNPSTCWPGAMSESQ  YLTPRSQRGRFG HNFPRTPYSRSIFSKSK
Subjt:  LNEVGASPVDIARAYMSNRKCEPGLLSDKIPDDERALLHGDHQMSKPFIPSMSPNPSTCWPGAMSESQCGYLTPRSQRGRFGLHNFPRTPYSRSIFSKSK

Query:  SKLTQLQGDVQKFVNTPSPLWQQSRTPAYAQNIIPPDVYNLMYILSLLGLVATGPGRIMGRLNVNVLQDLEVMLSKIVKEAEAILEELNPS----PVQVL
        SKLTQLQGD QKFVNTPSPLWQQS TPAY+Q     D ++        G +  GP R +GR    V            ++AE  +E  N S    P    
Subjt:  SKLTQLQGDVQKFVNTPSPLWQQSRTPAYAQNIIPPDVYNLMYILSLLGLVATGPGRIMGRLNVNVLQDLEVMLSKIVKEAEAILEELNPS----PVQVL

Query:  GYGLGLAAT--LYALLGNASLIYNLL
           LG A+T  L   +GN S   +LL
Subjt:  GYGLGLAAT--LYALLGNASLIYNLL

A0A6J1I9W7 nuclear pore complex protein NUP1-like isoform X21.8e-6163.27Show/hide
Query:  LNEVGASPVDIARAYMSNRKCEPGLLSDKIPDDERALLHGDHQMSKPFIPSMSPNPSTCWPGAMSESQCGYLTPRSQRGRFGLHNFPRTPYSRSIFSKSK
        LN VGASPVDIARAYMSNRK EPGLLSDKIPDDER LL+GDHQMSK FIP MSPNPSTCWPGAMSESQ  YLTPRSQRGRFG HNFPRTPYSRSIFSKSK
Subjt:  LNEVGASPVDIARAYMSNRKCEPGLLSDKIPDDERALLHGDHQMSKPFIPSMSPNPSTCWPGAMSESQCGYLTPRSQRGRFGLHNFPRTPYSRSIFSKSK

Query:  SKLTQLQGDVQKFVNTPSPLWQQSRTPAYAQNIIPPDVYNLMYILSLLGLVATGPGRIMGRLNVNVLQDLEVMLSKIVKEAEAILEELNPS----PVQVL
        SKLTQLQGD QKFVNTPSPLWQQS TPAY+Q     D ++        G +  GP R +GR    V            ++AE  +E  N S    P    
Subjt:  SKLTQLQGDVQKFVNTPSPLWQQSRTPAYAQNIIPPDVYNLMYILSLLGLVATGPGRIMGRLNVNVLQDLEVMLSKIVKEAEAILEELNPS----PVQVL

Query:  GYGLGLAAT--LYALLGNASLIYNLL
           LG A+T  L   +GN S   +LL
Subjt:  GYGLGLAAT--LYALLGNASLIYNLL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G59780.1 Rhodanese/Cell cycle control phosphatase superfamily protein1.5e-0453.85Show/hide
Query:  EVMLSKIVKEAEAILEELNPSPVQVLGYGLGLAATLYAL
        E  L+ + +EAEAI E++NPSP+Q+ G G+G  A LYAL
Subjt:  EVMLSKIVKEAEAILEELNPSPVQVLGYGLGLAATLYAL

AT5G20200.1 nucleoporin-related9.0e-2143.51Show/hide
Query:  NEVGASPVDIARAYMSNRKCEPGLLSDKIPDDERALLHGDHQMSKPFIPSMSPNPSTCWPGAMSESQCGYLTPRSQRGRFGLHNFPRTPYSRSIFSKSKS
        +EVG SP ++A+AYM  +          +  +E+  L     + K  + S S  PS CWPG  S  Q G+ TP+S+R  +GL NFPRTPYSR+I S SKS
Subjt:  NEVGASPVDIARAYMSNRKCEPGLLSDKIPDDERALLHGDHQMSKPFIPSMSPNPSTCWPGAMSESQCGYLTPRSQRGRFGLHNFPRTPYSRSIFSKSKS

Query:  KLTQLQGDVQKFV-NTPSPLWQQSRTPAYAQ
        KL QLQ D  K + N  SP   QS    Y Q
Subjt:  KLTQLQGDVQKFV-NTPSPLWQQSRTPAYAQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTAAATTTGGTTAAGAAACTAAATGAAGTTGGAGCATCACCTGTGGATATTGCAAGAGCATACATGAGCAACCGAAAATGTGAACCAGGCTTGCTTTCTGACAAGAT
ACCAGATGATGAAAGGGCTTTGCTTCATGGTGATCATCAAATGTCAAAGCCTTTTATTCCATCGATGTCCCCCAATCCATCAACTTGTTGGCCTGGTGCCATGTCAGAAA
GTCAGTGTGGTTATTTAACTCCAAGAAGTCAAAGAGGTAGATTTGGTCTTCATAATTTCCCTCGGACTCCATATTCTAGGAGTATCTTTTCAAAGTCCAAGTCCAAGCTA
ACTCAGTTGCAAGGAGATGTCCAAAAGTTTGTGAATACACCATCACCTCTCTGGCAGCAGTCACGAACTCCAGCTTATGCTCAGAACATCATCCCACCTGATGTGTACAA
CCTAATGTATATTCTCTCTCTTTTGGGGCTAGTAGCTACAGGGCCTGGAAGGATAATGGGGAGGTTAAATGTAAATGTCCTCCAGGATTTAGAGGTGATGTTGTCAAAAA
TTGTGAAGGAAGCTGAGGCAATCCTGGAGGAATTAAATCCATCTCCCGTGCAAGTTCTGGGTTATGGTTTGGGTCTTGCTGCAACTTTATATGCTTTACTAGGTAATGCA
AGTCTCATTTACAATCTACTGTTTGCATAA
mRNA sequenceShow/hide mRNA sequence
ATGGTAAATTTGGTTAAGAAACTAAATGAAGTTGGAGCATCACCTGTGGATATTGCAAGAGCATACATGAGCAACCGAAAATGTGAACCAGGCTTGCTTTCTGACAAGAT
ACCAGATGATGAAAGGGCTTTGCTTCATGGTGATCATCAAATGTCAAAGCCTTTTATTCCATCGATGTCCCCCAATCCATCAACTTGTTGGCCTGGTGCCATGTCAGAAA
GTCAGTGTGGTTATTTAACTCCAAGAAGTCAAAGAGGTAGATTTGGTCTTCATAATTTCCCTCGGACTCCATATTCTAGGAGTATCTTTTCAAAGTCCAAGTCCAAGCTA
ACTCAGTTGCAAGGAGATGTCCAAAAGTTTGTGAATACACCATCACCTCTCTGGCAGCAGTCACGAACTCCAGCTTATGCTCAGAACATCATCCCACCTGATGTGTACAA
CCTAATGTATATTCTCTCTCTTTTGGGGCTAGTAGCTACAGGGCCTGGAAGGATAATGGGGAGGTTAAATGTAAATGTCCTCCAGGATTTAGAGGTGATGTTGTCAAAAA
TTGTGAAGGAAGCTGAGGCAATCCTGGAGGAATTAAATCCATCTCCCGTGCAAGTTCTGGGTTATGGTTTGGGTCTTGCTGCAACTTTATATGCTTTACTAGGTAATGCA
AGTCTCATTTACAATCTACTGTTTGCATAA
Protein sequenceShow/hide protein sequence
MVNLVKKLNEVGASPVDIARAYMSNRKCEPGLLSDKIPDDERALLHGDHQMSKPFIPSMSPNPSTCWPGAMSESQCGYLTPRSQRGRFGLHNFPRTPYSRSIFSKSKSKL
TQLQGDVQKFVNTPSPLWQQSRTPAYAQNIIPPDVYNLMYILSLLGLVATGPGRIMGRLNVNVLQDLEVMLSKIVKEAEAILEELNPSPVQVLGYGLGLAATLYALLGNA
SLIYNLLFA