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Lag0017836 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0017836
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase
Genome locationchr5:9846751..9847101
RNA-Seq ExpressionLag0017836
SyntenyLag0017836
Gene Ontology termsGO:0090304 - nucleic acid metabolic process (biological process)
GO:0110165 - cellular anatomical structure (cellular component)
GO:0004518 - nuclease activity (molecular function)
GO:0005488 - binding (molecular function)
InterPro domainsIPR036691 - Endonuclease/exonuclease/phosphatase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA3462561.1 reverse transcriptase [Gossypium australe]5.6e-2147.37Show/hide
Query:  MKILNWNVRGLGNPRALRGLRHETQSHKPQIIFISGAKIGDVKAQKVRMNLGYDCCFCVDNTSKSDGLVLFWNNSIKLSMVSFSKGHIGSIIEDNLG-TW
        MKIL+WNVRGLGNPRA+RGLRH  +   PQ++F    KI   K +KVR   GY     V++     GL L W   + +++ SFS  HI  IIE++ G   
Subjt:  MKILNWNVRGLGNPRALRGLRHETQSHKPQIIFISGAKIGDVKAQKVRMNLGYDCCFCVDNTSKSDGLVLFWNNSIKLSMVSFSKGHIGSIIEDNLG-TW

Query:  RFTGFYGSPKVEER
        R TGFYGSP +++R
Subjt:  RFTGFYGSPKVEER

TXG51391.1 hypothetical protein EZV62_023915 [Acer yangbiense]7.3e-2142.98Show/hide
Query:  LNWNVRGLGNPRALRGLRHETQSHKPQIIFISGAKIGDVKAQKVRMNLGYDCCFCVDNTSKSDGLVLFWNNSIKLSMVSFSKGHIGS-IIEDNLGTWRFT
        L+WNVRGLGNP A+  L    + H P ++F+S  K    KA+++R++L ++   CVD+   SDGL+L W +S K+ +VSFS GHI + + +++   WRF 
Subjt:  LNWNVRGLGNPRALRGLRHETQSHKPQIIFISGAKIGDVKAQKVRMNLGYDCCFCVDNTSKSDGLVLFWNNSIKLSMVSFSKGHIGS-IIEDNLGTWRFT

Query:  GFYGSPKVEERAIS
        GFYG P   +R +S
Subjt:  GFYGSPKVEERAIS

TXG68544.1 hypothetical protein EZV62_003479 [Acer yangbiense]4.3e-2145.61Show/hide
Query:  LNWNVRGLGNPRALRGLRHETQSHKPQIIFISGAKIGDVKAQKVRMNLGYDCCFCVDNTSKSDGLVLFWNNSIKLSMVSFSKGHIGSIIEDNLG-TWRFT
        L WNV GLGNPRA   LR   + H P ++F+S  K    KA  V+++LG++ CF VD+   S GL+L W +SI +S++SFS GHI + I  + G  W F+
Subjt:  LNWNVRGLGNPRALRGLRHETQSHKPQIIFISGAKIGDVKAQKVRMNLGYDCCFCVDNTSKSDGLVLFWNNSIKLSMVSFSKGHIGSIIEDNLG-TWRFT

Query:  GFYGSPKVEERAIS
        GFYG P   +R  S
Subjt:  GFYGSPKVEERAIS

XP_022157437.1 uncharacterized protein LOC111024135 [Momordica charantia]2.3e-2245.69Show/hide
Query:  MKILNWNVRGLGNPRALRGLRHETQSHKPQIIFISGAKIGDVKAQKVRMNLGYDCCFCVDNTSKSDGLVLFWNNSIKLSMVSFSKGHIGSIIEDNLGTWR
        MK L WNV GLGNP   R LR+  +  +PQ++F+S  K       + +  L +DCC  V +T KS GL+L WN+   + + S S GHI SII D  G+WR
Subjt:  MKILNWNVRGLGNPRALRGLRHETQSHKPQIIFISGAKIGDVKAQKVRMNLGYDCCFCVDNTSKSDGLVLFWNNSIKLSMVSFSKGHIGSIIEDNLGTWR

Query:  FTGFYGSPKVEERAIS
        FTGFYG+P   +R+ S
Subjt:  FTGFYGSPKVEERAIS

XP_030497824.1 uncharacterized protein LOC115713480 [Cannabis sativa]2.1e-2041.03Show/hide
Query:  MKILNWNVRGLGNPRALRGLRHETQSHKPQIIFISGAKIGDVKAQKVRMNLGYDCCFCVDNTSKSDGLVLFWNNSIKLSMVSFSKGHIGSIIEDNLG-TW
        M ++ WNV+GLGNP  L+ L    + H P +IF+   ++ +   +++R+ +G+D CF V    KS GL L W    ++S+ SF+  HI +I+E++LG  W
Subjt:  MKILNWNVRGLGNPRALRGLRHETQSHKPQIIFISGAKIGDVKAQKVRMNLGYDCCFCVDNTSKSDGLVLFWNNSIKLSMVSFSKGHIGSIIEDNLG-TW

Query:  RFTGFYGSPKVEERAIS
        RFTGFYGSP   +R  S
Subjt:  RFTGFYGSPKVEERAIS

TrEMBL top hitse value%identityAlignment
A0A1U8JQZ9 uncharacterized protein LOC1079079632.1e-2146.36Show/hide
Query:  MKILNWNVRGLGNPRALRGLRHETQSHKPQIIFISGAKIGDVKAQKVRMNLGYDCCFCVDNTSKSDGLVLFWNNSIKLSMVSFSKGHIGSIIED--NLGT
        MKIL+WNVR LGNPR +R LRH  + H PQIIF+   K+   + +K+R + G+ C   VD+     GL L W  ++ +++ SFS  HI  I+E+  +   
Subjt:  MKILNWNVRGLGNPRALRGLRHETQSHKPQIIFISGAKIGDVKAQKVRMNLGYDCCFCVDNTSKSDGLVLFWNNSIKLSMVSFSKGHIGSIIED--NLGT

Query:  WRFTGFYGSP
        WRFTGFYGSP
Subjt:  WRFTGFYGSP

A0A5B6V0I7 Reverse transcriptase2.7e-2147.37Show/hide
Query:  MKILNWNVRGLGNPRALRGLRHETQSHKPQIIFISGAKIGDVKAQKVRMNLGYDCCFCVDNTSKSDGLVLFWNNSIKLSMVSFSKGHIGSIIEDNLG-TW
        MKIL+WNVRGLGNPRA+RGLRH  +   PQ++F    KI   K +KVR   GY     V++     GL L W   + +++ SFS  HI  IIE++ G   
Subjt:  MKILNWNVRGLGNPRALRGLRHETQSHKPQIIFISGAKIGDVKAQKVRMNLGYDCCFCVDNTSKSDGLVLFWNNSIKLSMVSFSKGHIGSIIEDNLG-TW

Query:  RFTGFYGSPKVEER
        R TGFYGSP +++R
Subjt:  RFTGFYGSPKVEER

A0A5C7IHU5 Uncharacterized protein2.1e-2145.61Show/hide
Query:  LNWNVRGLGNPRALRGLRHETQSHKPQIIFISGAKIGDVKAQKVRMNLGYDCCFCVDNTSKSDGLVLFWNNSIKLSMVSFSKGHIGSIIEDNLG-TWRFT
        L WNV GLGNPRA   LR   + H P ++F+S  K    KA  V+++LG++ CF VD+   S GL+L W +SI +S++SFS GHI + I  + G  W F+
Subjt:  LNWNVRGLGNPRALRGLRHETQSHKPQIIFISGAKIGDVKAQKVRMNLGYDCCFCVDNTSKSDGLVLFWNNSIKLSMVSFSKGHIGSIIEDNLG-TWRFT

Query:  GFYGSPKVEERAIS
        GFYG P   +R  S
Subjt:  GFYGSPKVEERAIS

A0A6J1DUG8 uncharacterized protein LOC1110241351.1e-2245.69Show/hide
Query:  MKILNWNVRGLGNPRALRGLRHETQSHKPQIIFISGAKIGDVKAQKVRMNLGYDCCFCVDNTSKSDGLVLFWNNSIKLSMVSFSKGHIGSIIEDNLGTWR
        MK L WNV GLGNP   R LR+  +  +PQ++F+S  K       + +  L +DCC  V +T KS GL+L WN+   + + S S GHI SII D  G+WR
Subjt:  MKILNWNVRGLGNPRALRGLRHETQSHKPQIIFISGAKIGDVKAQKVRMNLGYDCCFCVDNTSKSDGLVLFWNNSIKLSMVSFSKGHIGSIIEDNLGTWR

Query:  FTGFYGSPKVEERAIS
        FTGFYG+P   +R+ S
Subjt:  FTGFYGSPKVEERAIS

A0A803PBM9 Uncharacterized protein7.1e-2245.3Show/hide
Query:  MKILNWNVRGLGNPRALRGLRHETQSHKPQIIFISGAKIGDVKAQKVRMNLGYDCCFCVDNTSKSDGLVLFWNNSIKLSMVSFSKGHIGSIIEDNLGT-W
        MK+L WNV+GLGNP  +R L+       P+++FIS +++   KA+ +R++LGYD CF V+   KS GL+L W+N +  +++SFS  HI S I    G  W
Subjt:  MKILNWNVRGLGNPRALRGLRHETQSHKPQIIFISGAKIGDVKAQKVRMNLGYDCCFCVDNTSKSDGLVLFWNNSIKLSMVSFSKGHIGSIIEDNLGT-W

Query:  RFTGFYGSPKVEERAIS
        RFTGFYG P   +R  S
Subjt:  RFTGFYGSPKVEERAIS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAATCCTCAACTGGAACGTTCGAGGGTTGGGGAACCCCCGGGCGCTCCGAGGCTTGCGCCATGAAACGCAAAGCCATAAACCCCAAATCATTTTCATTTCAGGAGC
AAAGATTGGTGATGTGAAAGCTCAGAAAGTTAGGATGAACTTGGGTTATGACTGTTGTTTTTGTGTTGATAACACTAGCAAAAGCGACGGTCTCGTTTTGTTCTGGAACA
ATAGCATTAAGCTTAGCATGGTTTCATTTTCCAAAGGTCACATTGGCTCGATAATTGAGGATAACTTGGGCACTTGGCGATTCACTGGCTTCTATGGAAGTCCAAAAGTT
GAGGAGAGGGCGATTTCCTAG
mRNA sequenceShow/hide mRNA sequence
ATGAAAATCCTCAACTGGAACGTTCGAGGGTTGGGGAACCCCCGGGCGCTCCGAGGCTTGCGCCATGAAACGCAAAGCCATAAACCCCAAATCATTTTCATTTCAGGAGC
AAAGATTGGTGATGTGAAAGCTCAGAAAGTTAGGATGAACTTGGGTTATGACTGTTGTTTTTGTGTTGATAACACTAGCAAAAGCGACGGTCTCGTTTTGTTCTGGAACA
ATAGCATTAAGCTTAGCATGGTTTCATTTTCCAAAGGTCACATTGGCTCGATAATTGAGGATAACTTGGGCACTTGGCGATTCACTGGCTTCTATGGAAGTCCAAAAGTT
GAGGAGAGGGCGATTTCCTAG
Protein sequenceShow/hide protein sequence
MKILNWNVRGLGNPRALRGLRHETQSHKPQIIFISGAKIGDVKAQKVRMNLGYDCCFCVDNTSKSDGLVLFWNNSIKLSMVSFSKGHIGSIIEDNLGTWRFTGFYGSPKV
EERAIS