; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0017861 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0017861
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionSNF2 domain-containing protein CLASSY 4-like
Genome locationchr5:10298646..10300169
RNA-Seq ExpressionLag0017861
SyntenyLag0017861
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008465909.1 PREDICTED: SNF2 domain-containing protein CLASSY 4-like [Cucumis melo]2.3e-4048.19Show/hide
Query:  GTYSQPVCLDEEESDFQDNEKELDSSSRNNSGDSCDIGSSSSTDDEIYKSWAWSSSKKRTQFNNQSDDDILHKEEK----------DDTNSVESFYEG--
        GT SQP  +DEEESD Q +EKE+ SSS ++SGDSCD  S S+T DEIYK W WSS+KK+TQFNNQS+DD    E+K          DDTN VE F+ G  
Subjt:  GTYSQPVCLDEEESDFQDNEKELDSSSRNNSGDSCDIGSSSSTDDEIYKSWAWSSSKKRTQFNNQSDDDILHKEEK----------DDTNSVESFYEG--

Query:  ---------------------------------------------------------NKELPLDELDPPTSQVSQFSEIPLPLKFNFGFEEPRLPEKSEE
                                                                 +KELP  ELD PTSQ SQ   +PLPLK  FG  EP LPEKSEE
Subjt:  ---------------------------------------------------------NKELPLDELDPPTSQVSQFSEIPLPLKFNFGFEEPRLPEKSEE

Query:  EKELENLWAELNFGLRSDENGVVGSNTVENDDVFPSKLEQVDPCLHSDH
        EKEL+ LWAEL+F LRS E G+V  NTVE++D FPSKLEQVD CL  DH
Subjt:  EKELENLWAELNFGLRSDENGVVGSNTVENDDVFPSKLEQVDPCLHSDH

XP_011652682.2 SNF2 domain-containing protein CLASSY 4 [Cucumis sativus]7.3e-3947.04Show/hide
Query:  GTYSQPVCLDEEESDFQDNEKELDSSSRNNS----GDSCDIGSSSSTDDEIYKSWAWSSSKKRTQFNNQSDDDILHKEEK----------DDTNSVESFY
        GT SQP  +DEE+SD Q +EKE+ SSSR++S    GDSCD  S S+T DEIYK W W+SSKK+TQFNNQS+DD    E+K          DDTN V SF+
Subjt:  GTYSQPVCLDEEESDFQDNEKELDSSSRNNS----GDSCDIGSSSSTDDEIYKSWAWSSSKKRTQFNNQSDDDILHKEEK----------DDTNSVESFY

Query:  EG-----------------------------------------------------------NKELPLDELDPPTSQVSQFSEIPLPLKFNFGFEEPRLPE
         G                                                           +KELP  ELD PTSQ+SQ   +PLPLK  FG  E RLPE
Subjt:  EG-----------------------------------------------------------NKELPLDELDPPTSQVSQFSEIPLPLKFNFGFEEPRLPE

Query:  KSEEEKELENLWAELNFGLRSDENGVVGSNTVENDDVFPSKLEQVDPCLHSDH
        KSEEEKEL+ LWAEL+F +RS E G+V  NTVE++D FPSKLEQVD CL  DH
Subjt:  KSEEEKELENLWAELNFGLRSDENGVVGSNTVENDDVFPSKLEQVDPCLHSDH

XP_023532390.1 SNF2 domain-containing protein CLASSY 4-like [Cucurbita pepo subsp. pepo]1.0e-4042.61Show/hide
Query:  MNPIHGTYSQPVCLDEEESDFQDNEKELDSSSRNNSGDSCDIGSSS------------------------------------STDDEIYKSWAWSSS-KK
        MN   GT SQP+C+DEE SDF+ NEKE+ SSSR++SGDSCD  S S                                    + DD IYK  AWSS  KK
Subjt:  MNPIHGTYSQPVCLDEEESDFQDNEKELDSSSRNNSGDSCDIGSSS------------------------------------STDDEIYKSWAWSSS-KK

Query:  RTQFNNQSDDDILHKEEKDDTNSVESFYEG--------------------------------------------------------------NKELPLDE
        RTQFNNQSDD IL ++  D TN VE+F+ G                                                              +KELP D+
Subjt:  RTQFNNQSDDDILHKEEKDDTNSVESFYEG--------------------------------------------------------------NKELPLDE

Query:  LDPPTSQVSQFSEIPLPLKFNFGFEEPRLPEKSEEEKELENLWAELNFGLRSDENGVVGSNTVENDDVFPSKLEQVDPCLHSDH
        LD  TS +S   E+PLPLKFNF FEEP LPEK EEEKE++ LWAEL+F LRS E G V SNTVEN+D F SKL+Q D CL  DH
Subjt:  LDPPTSQVSQFSEIPLPLKFNFGFEEPRLPEKSEEEKELENLWAELNFGLRSDENGVVGSNTVENDDVFPSKLEQVDPCLHSDH

XP_023553658.1 SNF2 domain-containing protein CLASSY 3-like [Cucurbita pepo subsp. pepo]3.0e-4048.29Show/hide
Query:  MNPIHGTYSQPVCLDEEESDFQDNEKELDSSSRNNSGDSCDIGSSSSTDDEIYKSWAWSSSKKRTQFNNQSDDDILHKEEKDDTNSV-------------
        MN   GT SQPVC+DEEESDF  + K  DSSSR++SGDSCD  S S+TDD+ YK  AWSSSKK TQFN+ SDDDIL  ++ DDTN V             
Subjt:  MNPIHGTYSQPVCLDEEESDFQDNEKELDSSSRNNSGDSCDIGSSSSTDDEIYKSWAWSSSKKRTQFNNQSDDDILHKEEKDDTNSV-------------

Query:  ------------ESFYE------------------------GNKELPLDELDPPTSQVSQFSEIPLPLKFNFGFEEPRLPEKSEEEKELENLWAELNFGL
                      F++                         +KELP D+LDPP  Q+S      +PL   FGFEEP LPE+SE+EKEL+ LW EL+F L
Subjt:  ------------ESFYE------------------------GNKELPLDELDPPTSQVSQFSEIPLPLKFNFGFEEPRLPEKSEEEKELENLWAELNFGL

Query:  RSDENGVVGSNTVENDDVFPSKLEQVDPCLHSDH
        RS+E G V SNTV++ D FPS LE+VD CL  DH
Subjt:  RSDENGVVGSNTVENDDVFPSKLEQVDPCLHSDH

XP_038888949.1 SNF2 domain-containing protein CLASSY 3-like [Benincasa hispida]2.3e-4551.05Show/hide
Query:  GTYSQPVCLDEEESDFQDNEKELDSSSRNNSGDSCDIGSSSSTDDEIYKSWAWSSSKKRTQFNNQSDDDILHKEEKDDTNSVESFYEG------------
        GT SQPVC+DEE  DFQ ++KE+ SSSR++SGDSCD  S S+TDDE+YK WAWSSSKK+TQFNNQSDD  L +++ DDTN VESF  G            
Subjt:  GTYSQPVCLDEEESDFQDNEKELDSSSRNNSGDSCDIGSSSSTDDEIYKSWAWSSSKKRTQFNNQSDDDILHKEEKDDTNSVESFYEG------------

Query:  -----------------------------------------------NKELPLDELDPPTSQVSQFSEIPLPLKFNFGFEEPRLPEKSEEEKELENLWAE
                                                       +KELP DELD  TSQV   S +PLPLK  FG  E RLPEKSEEEKEL+ LWAE
Subjt:  -----------------------------------------------NKELPLDELDPPTSQVSQFSEIPLPLKFNFGFEEPRLPEKSEEEKELENLWAE

Query:  LNFGLRSDENGVVGSNTVENDDVFPSKLEQVDPCLHSDH
        L+F +RS E G+V SNTVE++D FPSK EQVD CL  DH
Subjt:  LNFGLRSDENGVVGSNTVENDDVFPSKLEQVDPCLHSDH

TrEMBL top hitse value%identityAlignment
A0A0A0LKD0 Uncharacterized protein3.5e-3947.04Show/hide
Query:  GTYSQPVCLDEEESDFQDNEKELDSSSRNNS----GDSCDIGSSSSTDDEIYKSWAWSSSKKRTQFNNQSDDDILHKEEK----------DDTNSVESFY
        GT SQP  +DEE+SD Q +EKE+ SSSR++S    GDSCD  S S+T DEIYK W W+SSKK+TQFNNQS+DD    E+K          DDTN V SF+
Subjt:  GTYSQPVCLDEEESDFQDNEKELDSSSRNNS----GDSCDIGSSSSTDDEIYKSWAWSSSKKRTQFNNQSDDDILHKEEK----------DDTNSVESFY

Query:  EG-----------------------------------------------------------NKELPLDELDPPTSQVSQFSEIPLPLKFNFGFEEPRLPE
         G                                                           +KELP  ELD PTSQ+SQ   +PLPLK  FG  E RLPE
Subjt:  EG-----------------------------------------------------------NKELPLDELDPPTSQVSQFSEIPLPLKFNFGFEEPRLPE

Query:  KSEEEKELENLWAELNFGLRSDENGVVGSNTVENDDVFPSKLEQVDPCLHSDH
        KSEEEKEL+ LWAEL+F +RS E G+V  NTVE++D FPSKLEQVD CL  DH
Subjt:  KSEEEKELENLWAELNFGLRSDENGVVGSNTVENDDVFPSKLEQVDPCLHSDH

A0A1S3CRE5 SNF2 domain-containing protein CLASSY 4-like1.1e-4048.19Show/hide
Query:  GTYSQPVCLDEEESDFQDNEKELDSSSRNNSGDSCDIGSSSSTDDEIYKSWAWSSSKKRTQFNNQSDDDILHKEEK----------DDTNSVESFYEG--
        GT SQP  +DEEESD Q +EKE+ SSS ++SGDSCD  S S+T DEIYK W WSS+KK+TQFNNQS+DD    E+K          DDTN VE F+ G  
Subjt:  GTYSQPVCLDEEESDFQDNEKELDSSSRNNSGDSCDIGSSSSTDDEIYKSWAWSSSKKRTQFNNQSDDDILHKEEK----------DDTNSVESFYEG--

Query:  ---------------------------------------------------------NKELPLDELDPPTSQVSQFSEIPLPLKFNFGFEEPRLPEKSEE
                                                                 +KELP  ELD PTSQ SQ   +PLPLK  FG  EP LPEKSEE
Subjt:  ---------------------------------------------------------NKELPLDELDPPTSQVSQFSEIPLPLKFNFGFEEPRLPEKSEE

Query:  EKELENLWAELNFGLRSDENGVVGSNTVENDDVFPSKLEQVDPCLHSDH
        EKEL+ LWAEL+F LRS E G+V  NTVE++D FPSKLEQVD CL  DH
Subjt:  EKELENLWAELNFGLRSDENGVVGSNTVENDDVFPSKLEQVDPCLHSDH

A0A5A7T6P1 SNF2 domain-containing protein CLASSY 4-like1.1e-4048.19Show/hide
Query:  GTYSQPVCLDEEESDFQDNEKELDSSSRNNSGDSCDIGSSSSTDDEIYKSWAWSSSKKRTQFNNQSDDDILHKEEK----------DDTNSVESFYEG--
        GT SQP  +DEEESD Q +EKE+ SSS ++SGDSCD  S S+T DEIYK W WSS+KK+TQFNNQS+DD    E+K          DDTN VE F+ G  
Subjt:  GTYSQPVCLDEEESDFQDNEKELDSSSRNNSGDSCDIGSSSSTDDEIYKSWAWSSSKKRTQFNNQSDDDILHKEEK----------DDTNSVESFYEG--

Query:  ---------------------------------------------------------NKELPLDELDPPTSQVSQFSEIPLPLKFNFGFEEPRLPEKSEE
                                                                 +KELP  ELD PTSQ SQ   +PLPLK  FG  EP LPEKSEE
Subjt:  ---------------------------------------------------------NKELPLDELDPPTSQVSQFSEIPLPLKFNFGFEEPRLPEKSEE

Query:  EKELENLWAELNFGLRSDENGVVGSNTVENDDVFPSKLEQVDPCLHSDH
        EKEL+ LWAEL+F LRS E G+V  NTVE++D FPSKLEQVD CL  DH
Subjt:  EKELENLWAELNFGLRSDENGVVGSNTVENDDVFPSKLEQVDPCLHSDH

A0A6J1H1W6 SNF2 domain-containing protein CLASSY 4-like4.6e-3941.26Show/hide
Query:  MNPIHGTYSQPVCLDEEESDFQDNEKELDSSSRNNSGDSCDIGSSS--------------------------------------STDDEIYKSWAWSSS-
        MN   GT SQP+C+DEE SDF+ NEKE+DSSSR++S DSCD  + S                                      + DD IYK  AWSS  
Subjt:  MNPIHGTYSQPVCLDEEESDFQDNEKELDSSSRNNSGDSCDIGSSS--------------------------------------STDDEIYKSWAWSSS-

Query:  KKRTQFNNQSDDDILHKEEKDDTNSVESFYEG--------------------------------------------------------------NKELPL
        KKRTQFN QSDD IL ++  D TN VE+F+ G                                                              +KELP 
Subjt:  KKRTQFNNQSDDDILHKEEKDDTNSVESFYEG--------------------------------------------------------------NKELPL

Query:  DELDPPTSQVSQFSEIPLPLKFNFGFEEPRLPEKSEEEKELENLWAELNFGLRSDENGVVGSNTVENDDVFPSKLEQVDPCLHSDH
        D+LD  TS +S   E+PLPLKFNF FEEP LPE+ EEEKE++ LWAEL+F LRS E G V SNTVEN+D F SKL+Q D CL  DH
Subjt:  DELDPPTSQVSQFSEIPLPLKFNFGFEEPRLPEKSEEEKELENLWAELNFGLRSDENGVVGSNTVENDDVFPSKLEQVDPCLHSDH

A0A6J1K282 SNF2 domain-containing protein CLASSY 4-like6.7e-3840.42Show/hide
Query:  GTYSQPVCLDEEESDFQDNEKELDSSSRNNSGDSCDIGSSS--------------------------------------------STDDEIYKSWAWSSS
        GT SQP+C+DEE SDF+ NEKE+ SSSR++SGDSCD  + S                                            + DD IYK  AWSS 
Subjt:  GTYSQPVCLDEEESDFQDNEKELDSSSRNNSGDSCDIGSSS--------------------------------------------STDDEIYKSWAWSSS

Query:  -KKRTQFNNQSDDDILHKEEKDDTNSVESFYEG--------------------------------------------------------------NKELP
         KKRTQFNNQSDD IL ++  D TN VE+F+ G                                                              +KELP
Subjt:  -KKRTQFNNQSDDDILHKEEKDDTNSVESFYEG--------------------------------------------------------------NKELP

Query:  LDELDPPTSQVSQFSEIPLPLKFNFGFEEPRLPEKSEEEKELENLWAELNFGLRSDENGVVGSNTVENDDVFPSKLEQVDPCLHSDH
         D+LD  TS +S   E+PLPLKFNF FEEP LPE+ EEEKE++ LWAEL+F LRS E G V S TVEN+D F SKL+Q D CL  DH
Subjt:  LDELDPPTSQVSQFSEIPLPLKFNFGFEEPRLPEKSEEEKELENLWAELNFGLRSDENGVVGSNTVENDDVFPSKLEQVDPCLHSDH

SwissProt top hitse value%identityAlignment
Q9LK10 SNF2 domain-containing protein CLASSY 47.1e-0531.82Show/hide
Query:  IGSSSSTDDEIYKSWAWSSSKKRTQFNNQSDDDILHKEEKDDTNSVESFYEGNKELPLDELDPPTSQVSQFSEIPLPLKFNFGFEEPRLPEKSEEEKELE
        I    S +D + +    SSS+K  +     +    H+  + +  + ESFY G K    +E       ++  +E   PL   FG EEP L EK+EEEKEL+
Subjt:  IGSSSSTDDEIYKSWAWSSSKKRTQFNNQSDDDILHKEEKDDTNSVESFYEGNKELPLDELDPPTSQVSQFSEIPLPLKFNFGFEEPRLPEKSEEEKELE

Query:  NLWAELNFGLRSDENGVVGSNTVENDDVFPSK
        +LW ++N  L  +  G+  S   +N D+  SK
Subjt:  NLWAELNFGLRSDENGVVGSNTVENDDVFPSK

Arabidopsis top hitse value%identityAlignment
AT3G24340.1 chromatin remodeling 405.1e-0631.82Show/hide
Query:  IGSSSSTDDEIYKSWAWSSSKKRTQFNNQSDDDILHKEEKDDTNSVESFYEGNKELPLDELDPPTSQVSQFSEIPLPLKFNFGFEEPRLPEKSEEEKELE
        I    S +D + +    SSS+K  +     +    H+  + +  + ESFY G K    +E       ++  +E   PL   FG EEP L EK+EEEKEL+
Subjt:  IGSSSSTDDEIYKSWAWSSSKKRTQFNNQSDDDILHKEEKDDTNSVESFYEGNKELPLDELDPPTSQVSQFSEIPLPLKFNFGFEEPRLPEKSEEEKELE

Query:  NLWAELNFGLRSDENGVVGSNTVENDDVFPSK
        +LW ++N  L  +  G+  S   +N D+  SK
Subjt:  NLWAELNFGLRSDENGVVGSNTVENDDVFPSK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATCCTATTCACGGAACTTATAGTCAGCCAGTCTGTCTTGACGAGGAAGAGTCAGATTTTCAGGATAATGAGAAAGAATTAGATTCTTCGTCAAGGAACAACAGTGG
AGATTCTTGTGATATTGGTAGTAGTAGTAGTACTGATGATGAAATTTACAAGTCATGGGCCTGGAGTAGCAGTAAAAAGAGAACTCAGTTCAACAATCAAAGTGATGATG
ATATCTTACACAAAGAAGAAAAAGATGATACAAACAGTGTTGAGAGTTTTTATGAGGGGAACAAAGAACTGCCTTTAGATGAGTTAGATCCTCCTACAAGTCAGGTCTCC
CAATTTTCTGAGATACCTCTCCCTTTGAAGTTCAATTTTGGATTTGAGGAACCACGTCTTCCAGAGAAGTCAGAGGAAGAAAAAGAATTGGAAAATTTGTGGGCAGAGCT
TAACTTTGGTCTCAGATCCGACGAGAATGGTGTGGTGGGTTCTAATACAGTTGAAAACGATGATGTCTTTCCTTCAAAGCTTGAGCAAGTGGATCCTTGTCTTCACAGTG
ATCATTAG
mRNA sequenceShow/hide mRNA sequence
ATGAATCCTATTCACGGAACTTATAGTCAGCCAGTCTGTCTTGACGAGGAAGAGTCAGATTTTCAGGATAATGAGAAAGAATTAGATTCTTCGTCAAGGAACAACAGTGG
AGATTCTTGTGATATTGGTAGTAGTAGTAGTACTGATGATGAAATTTACAAGTCATGGGCCTGGAGTAGCAGTAAAAAGAGAACTCAGTTCAACAATCAAAGTGATGATG
ATATCTTACACAAAGAAGAAAAAGATGATACAAACAGTGTTGAGAGTTTTTATGAGGGGAACAAAGAACTGCCTTTAGATGAGTTAGATCCTCCTACAAGTCAGGTCTCC
CAATTTTCTGAGATACCTCTCCCTTTGAAGTTCAATTTTGGATTTGAGGAACCACGTCTTCCAGAGAAGTCAGAGGAAGAAAAAGAATTGGAAAATTTGTGGGCAGAGCT
TAACTTTGGTCTCAGATCCGACGAGAATGGTGTGGTGGGTTCTAATACAGTTGAAAACGATGATGTCTTTCCTTCAAAGCTTGAGCAAGTGGATCCTTGTCTTCACAGTG
ATCATTAG
Protein sequenceShow/hide protein sequence
MNPIHGTYSQPVCLDEEESDFQDNEKELDSSSRNNSGDSCDIGSSSSTDDEIYKSWAWSSSKKRTQFNNQSDDDILHKEEKDDTNSVESFYEGNKELPLDELDPPTSQVS
QFSEIPLPLKFNFGFEEPRLPEKSEEEKELENLWAELNFGLRSDENGVVGSNTVENDDVFPSKLEQVDPCLHSDH