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Lag0017862 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0017862
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Descriptionflowering locus K homology domain-like
Genome locationchr5:10309124..10309661
RNA-Seq ExpressionLag0017862
SyntenyLag0017862
Gene Ontology termsGO:0003723 - RNA binding (molecular function)
InterPro domainsIPR004088 - K Homology domain, type 1
IPR036612 - K Homology domain, type 1 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6586320.1 Flowering locus K-likey domain protein, partial [Cucurbita argyrosperma subsp. sororia]8.1e-1033.9Show/hide
Query:  MASKVSTRLLAVASQARSLIRKQGRTVTSIQEESNCIVRVLRTG--------------------------------------------------------
        M  KVSTRLL  ASQA SLI KQG TV SIQEESNCIVRVL +                                                         
Subjt:  MASKVSTRLLAVASQARSLIRKQGRTVTSIQEESNCIVRVLRTG--------------------------------------------------------

Query:  --------------------------------------------PPGDVPSVMDKQPHHGISAYGREALMGVHPERN
                                                    PP D+PS MDKQPHHGISAYGREA MGVHP+ N
Subjt:  --------------------------------------------PPGDVPSVMDKQPHHGISAYGREALMGVHPERN
KAG7021167.1 Flowering locus K-likey domain protein [Cucurbita argyrosperma subsp. argyrosperma]8.1e-1033.9Show/hide
Query:  MASKVSTRLLAVASQARSLIRKQGRTVTSIQEESNCIVRVLRTG--------------------------------------------------------
        M  KVSTRLL  ASQA SLI KQG TV SIQEESNCIVRVL +                                                         
Subjt:  MASKVSTRLLAVASQARSLIRKQGRTVTSIQEESNCIVRVLRTG--------------------------------------------------------

Query:  --------------------------------------------PPGDVPSVMDKQPHHGISAYGREALMGVHPERN
                                                    PP D+PS MDKQPHHGISAYGREA MGVHP+ N
Subjt:  --------------------------------------------PPGDVPSVMDKQPHHGISAYGREALMGVHPERN
XP_022937898.1 flowering locus K homology domain-like [Cucurbita moschata]8.1e-1033.9Show/hide
Query:  MASKVSTRLLAVASQARSLIRKQGRTVTSIQEESNCIVRVLRTG--------------------------------------------------------
        M  KVSTRLL  ASQA SLI KQG TV SIQEESNCIVRVL +                                                         
Subjt:  MASKVSTRLLAVASQARSLIRKQGRTVTSIQEESNCIVRVLRTG--------------------------------------------------------

Query:  --------------------------------------------PPGDVPSVMDKQPHHGISAYGREALMGVHPERN
                                                    PP D+PS MDKQPHHGISAYGREA MGVHP+ N
Subjt:  --------------------------------------------PPGDVPSVMDKQPHHGISAYGREALMGVHPERN
XP_022965693.1 flowering locus K homology domain-like [Cucurbita maxima]8.1e-1033.9Show/hide
Query:  MASKVSTRLLAVASQARSLIRKQGRTVTSIQEESNCIVRVLRTG--------------------------------------------------------
        M  KVSTRLL  ASQA SLI KQG TV SIQEESNCIVRVL +                                                         
Subjt:  MASKVSTRLLAVASQARSLIRKQGRTVTSIQEESNCIVRVLRTG--------------------------------------------------------

Query:  --------------------------------------------PPGDVPSVMDKQPHHGISAYGREALMGVHPERN
                                                    PP D+PS MDKQPHHGISAYGREA MGVHP+ N
Subjt:  --------------------------------------------PPGDVPSVMDKQPHHGISAYGREALMGVHPERN
XP_023538035.1 flowering locus K homology domain-like [Cucurbita pepo subsp. pepo]8.1e-1033.9Show/hide
Query:  MASKVSTRLLAVASQARSLIRKQGRTVTSIQEESNCIVRVLRTG--------------------------------------------------------
        M  KVSTRLL  ASQA SLI KQG TV SIQEESNCIVRVL +                                                         
Subjt:  MASKVSTRLLAVASQARSLIRKQGRTVTSIQEESNCIVRVLRTG--------------------------------------------------------

Query:  --------------------------------------------PPGDVPSVMDKQPHHGISAYGREALMGVHPERN
                                                    PP D+PS MDKQPHHGISAYGREA MGVHP+ N
Subjt:  --------------------------------------------PPGDVPSVMDKQPHHGISAYGREALMGVHPERN
TrEMBL top hitse value%identityAlignment
A0A6J1CPP3 flowering locus K homology domain2.0e-0933.9Show/hide
Query:  MASKVSTRLLAVASQARSLIRKQGRTVTSIQEESNCIVRVLRTG--------------------------------------------------------
        M  KVSTRLL  ASQA SLI KQG TV SIQEESNCIVRVL +                                                         
Subjt:  MASKVSTRLLAVASQARSLIRKQGRTVTSIQEESNCIVRVLRTG--------------------------------------------------------

Query:  --------------------------------------------PPGDVPSVMDKQPHHGISAYGREALMGVHPERN
                                                    PP D+PSVMDKQPHHGISAYGREA MGVH   N
Subjt:  --------------------------------------------PPGDVPSVMDKQPHHGISAYGREALMGVHPERN
A0A6J1FHB5 flowering locus K homology domain-like3.9e-1033.9Show/hide
Query:  MASKVSTRLLAVASQARSLIRKQGRTVTSIQEESNCIVRVLRTG--------------------------------------------------------
        M  KVSTRLL  ASQA SLI KQG TV SIQEESNCIVRVL +                                                         
Subjt:  MASKVSTRLLAVASQARSLIRKQGRTVTSIQEESNCIVRVLRTG--------------------------------------------------------

Query:  --------------------------------------------PPGDVPSVMDKQPHHGISAYGREALMGVHPERN
                                                    PP D+PS MDKQPHHGISAYGREA MGVHP+ N
Subjt:  --------------------------------------------PPGDVPSVMDKQPHHGISAYGREALMGVHPERN
A0A6J1G2W6 flowering locus K homology domain-like1.1e-0934.27Show/hide
Query:  MASKVSTRLLAVASQARSLIRKQGRTVTSIQEESNCIVRVLRTG--------------------------------------------------------
        M  KVSTRLL  ASQA SLI KQG TV SIQEESNCIVRVL T                                                         
Subjt:  MASKVSTRLLAVASQARSLIRKQGRTVTSIQEESNCIVRVLRTG--------------------------------------------------------

Query:  ---------------------------------------------PPGDVPSVMDKQPHHGISAYGREALMGVHPERN
                                                     PP D+PSVMDKQPHHGISAYGREA MGVH   N
Subjt:  ---------------------------------------------PPGDVPSVMDKQPHHGISAYGREALMGVHPERN
A0A6J1HPQ7 flowering locus K homology domain-like3.9e-1033.9Show/hide
Query:  MASKVSTRLLAVASQARSLIRKQGRTVTSIQEESNCIVRVLRTG--------------------------------------------------------
        M  KVSTRLL  ASQA SLI KQG TV SIQEESNCIVRVL +                                                         
Subjt:  MASKVSTRLLAVASQARSLIRKQGRTVTSIQEESNCIVRVLRTG--------------------------------------------------------

Query:  --------------------------------------------PPGDVPSVMDKQPHHGISAYGREALMGVHPERN
                                                    PP D+PS MDKQPHHGISAYGREA MGVHP+ N
Subjt:  --------------------------------------------PPGDVPSVMDKQPHHGISAYGREALMGVHPERN
A0A6J1KG23 flowering locus K homology domain-like1.1e-0934.27Show/hide
Query:  MASKVSTRLLAVASQARSLIRKQGRTVTSIQEESNCIVRVLRTG--------------------------------------------------------
        M  KVSTRLL  ASQA SLI KQG TV SIQEESNCIVRVL T                                                         
Subjt:  MASKVSTRLLAVASQARSLIRKQGRTVTSIQEESNCIVRVLRTG--------------------------------------------------------

Query:  ---------------------------------------------PPGDVPSVMDKQPHHGISAYGREALMGVHPERN
                                                     PP D+PSVMDKQPHHGISAYGREA MGVH   N
Subjt:  ---------------------------------------------PPGDVPSVMDKQPHHGISAYGREALMGVHPERN
SwissProt top hitse value%identityAlignment
Q9SR13 Flowering locus K homology domain9.7e-0676.92Show/hide
Query:  SKVSTRLLAVASQARSLIRKQGRTVTSIQEESNCIVRVL
        SKVSTRLL  ASQA SLI KQG TV +IQE S CIVRVL
Subjt:  SKVSTRLLAVASQARSLIRKQGRTVTSIQEESNCIVRVL
Arabidopsis top hitse value%identityAlignment
AT3G04610.1 RNA-binding KH domain-containing protein6.9e-0776.92Show/hide
Query:  SKVSTRLLAVASQARSLIRKQGRTVTSIQEESNCIVRVL
        SKVSTRLL  ASQA SLI KQG TV +IQE S CIVRVL
Subjt:  SKVSTRLLAVASQARSLIRKQGRTVTSIQEESNCIVRVL
AT3G04610.1 RNA-binding KH domain-containing protein3.5e-0362.07Show/hide
Query:  PPGDVPSVMDKQPHHGISAYGREALMGVH
        PP      M+KQPH GISAYGRE  M VH
Subjt:  PPGDVPSVMDKQPHHGISAYGREALMGVH

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAAGTAAAGTCTCAACGAGACTACTAGCGGTAGCTTCACAAGCGAGAAGTTTGATTAGGAAGCAGGGAAGGACTGTTACATCCATTCAAGAAGAGTCAAATTGTAT
AGTTAGAGTTCTTCGAACAGGTCCACCTGGTGATGTGCCATCGGTTATGGATAAGCAACCTCATCATGGAATTTCTGCTTATGGAAGGGAGGCTCTGATGGGTGTTCATC
CTGAAAGGAATAAAAGTCCCCACGCAGCGGAAGCGCATCGATTGGACCTTACGCCATATATTAATTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCAAGTAAAGTCTCAACGAGACTACTAGCGGTAGCTTCACAAGCGAGAAGTTTGATTAGGAAGCAGGGAAGGACTGTTACATCCATTCAAGAAGAGTCAAATTGTAT
AGTTAGAGTTCTTCGAACAGGTCCACCTGGTGATGTGCCATCGGTTATGGATAAGCAACCTCATCATGGAATTTCTGCTTATGGAAGGGAGGCTCTGATGGGTGTTCATC
CTGAAAGGAATAAAAGTCCCCACGCAGCGGAAGCGCATCGATTGGACCTTACGCCATATATTAATTAA
Protein sequenceShow/hide protein sequence
MASKVSTRLLAVASQARSLIRKQGRTVTSIQEESNCIVRVLRTGPPGDVPSVMDKQPHHGISAYGREALMGVHPERNKSPHAAEAHRLDLTPYIN