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Lag0017876 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0017876
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionBED-type domain-containing protein
Genome locationchr5:10623456..10624010
RNA-Seq ExpressionLag0017876
SyntenyLag0017876
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG5532188.1 hypothetical protein RHGRI_026721 [Rhododendron griersonianum]5.8e-2851.23Show/hide
Query:  MSSSSHCQSSSPSIGSTSS--NIEDDSKPLWQYVTKIQKLSGGGGNFSWQCNFCPVIKKSSYTRVRAHLLKINSQGIGVCLKVTPKDIAEMEKLENEAKA
        M S+S    SS S  S  S  N  D + PLW YVTK+QKLSG GGN  WQCNFC VIKKSSYTRV+ HLLK+ S GIG C KVT + +A M+KLE+EAKA
Subjt:  MSSSSHCQSSSPSIGSTSS--NIEDDSKPLWQYVTKIQKLSGGGGNFSWQCNFCPVIKKSSYTRVRAHLLKINSQGIGVCLKVTPKDIAEMEKLENEAKA

Query:  RMERKTPKNVPLPP-TPSVINIGGVNVSNSPITSEQKKRKGSGPSGSISAHEKSFNKTSQDQ
        +M+   PK VPLPP T S   + G +         +K+R   G + +IS  EK+++K  +DQ
Subjt:  RMERKTPKNVPLPP-TPSVINIGGVNVSNSPITSEQKKRKGSGPSGSISAHEKSFNKTSQDQ

XP_022156304.1 uncharacterized protein LOC111023231 isoform X1 [Momordica charantia]6.1e-3052.8Show/hide
Query:  SSSSHCQSSSPSIGSTSSNIEDDSKPLWQYVTKIQKLSGGGGNFSWQCNFCPVIKKSSYTRVRAHLLKINSQGIGVCLKVTPKDIAEMEKLENEAKARME
        S SS  +  S SI  + SNIED+  PLW+YVTK Q+L+  GGN SWQCNFC   K+SSYTRVRAHL+K++  GIG+C KVT KD+AEM++LE+EAK R E
Subjt:  SSSSHCQSSSPSIGSTSSNIEDDSKPLWQYVTKIQKLSGGGGNFSWQCNFCPVIKKSSYTRVRAHLLKINSQGIGVCLKVTPKDIAEMEKLENEAKARME

Query:  RKTPKNVPLPPTP--SVINIGGV-NVSNSPITSEQKKRKGSGPSGSISAHEKSFNKTSQDQ
        +  PK V LPP       + G + + S S  T++ KKRK S      S  EKSFN T+ DQ
Subjt:  RKTPKNVPLPPTP--SVINIGGV-NVSNSPITSEQKKRKGSGPSGSISAHEKSFNKTSQDQ

XP_022156306.1 uncharacterized protein LOC111023231 isoform X2 [Momordica charantia]6.1e-3052.8Show/hide
Query:  SSSSHCQSSSPSIGSTSSNIEDDSKPLWQYVTKIQKLSGGGGNFSWQCNFCPVIKKSSYTRVRAHLLKINSQGIGVCLKVTPKDIAEMEKLENEAKARME
        S SS  +  S SI  + SNIED+  PLW+YVTK Q+L+  GGN SWQCNFC   K+SSYTRVRAHL+K++  GIG+C KVT KD+AEM++LE+EAK R E
Subjt:  SSSSHCQSSSPSIGSTSSNIEDDSKPLWQYVTKIQKLSGGGGNFSWQCNFCPVIKKSSYTRVRAHLLKINSQGIGVCLKVTPKDIAEMEKLENEAKARME

Query:  RKTPKNVPLPPTP--SVINIGGV-NVSNSPITSEQKKRKGSGPSGSISAHEKSFNKTSQDQ
        +  PK V LPP       + G + + S S  T++ KKRK S      S  EKSFN T+ DQ
Subjt:  RKTPKNVPLPPTP--SVINIGGV-NVSNSPITSEQKKRKGSGPSGSISAHEKSFNKTSQDQ

XP_038721052.1 uncharacterized protein LOC120013346 isoform X1 [Tripterygium wilfordii]2.9e-2745.25Show/hide
Query:  MSSSSHCQSSSPSIGSTSSNIEDDSKPLWQYVTKIQKLSGGGGNFSWQCNFCPVIKKSSYTRVRAHLLKINSQGIGVCLKVTPKDIAEMEKLENEAKARM
        +++S     S+ +  ++S  +ED  KPLW+YV + +K  GGGGN SW CNFC + K +SYTRVRAHLLK+   GI  C  VT KDIAEM++LE EAK R 
Subjt:  MSSSSHCQSSSPSIGSTSSNIEDDSKPLWQYVTKIQKLSGGGGNFSWQCNFCPVIKKSSYTRVRAHLLKINSQGIGVCLKVTPKDIAEMEKLENEAKARM

Query:  ERKTPKNVPLPPTPSVINIGGVNVSNSPITSEQKKRKGSGPSGSISAHEKSFNKTSQDQFVVVLDTLLNTKQPLPTHAA
            PK VPLP  PS +  GG+      I  E KKRK  G S   S  EKSFN  +++Q   ++         LP H A
Subjt:  ERKTPKNVPLPPTPSVINIGGVNVSNSPITSEQKKRKGSGPSGSISAHEKSFNKTSQDQFVVVLDTLLNTKQPLPTHAA

XP_038891577.1 uncharacterized protein LOC120080967 [Benincasa hispida]5.4e-3456.08Show/hide
Query:  EDDSKPLWQYVTKIQKLSGGGGNFSWQCNFCPVIKKSSYTRVRAHLLKINSQGIGVCLKVTPKDIAEMEKLENEAKARMERKTPKNVPLPPTPSV-----
        +DD+KPLWQYVTK ++L+ G GN SWQCNFC   KK SYTRVRAHLLK++  GIG+C K+T KD+AEM+KLE+EAK R+ R  PK VPLPP+  +     
Subjt:  EDDSKPLWQYVTKIQKLSGGGGNFSWQCNFCPVIKKSSYTRVRAHLLKINSQGIGVCLKVTPKDIAEMEKLENEAKARMERKTPKNVPLPPTPSV-----

Query:  -INIGGVNV----SNSPITSEQKKRKGSGPSGSISAHEKSFNKTSQDQ
            G  N+    SNS  T EQKKRK     G++SA EKSFN   +DQ
Subjt:  -INIGGVNV----SNSPITSEQKKRKGSGPSGSISAHEKSFNKTSQDQ

TrEMBL top hitse value%identityAlignment
A0A1Q3C4M6 DUF659 domain-containing protein7.9e-2347.18Show/hide
Query:  PSIGST--SSNIEDDSKPLWQYVTKIQKLSGGGGNFSWQCNFCPVIKKSSYTRVRAHLLKINSQGIGVCLKVTPKDIAEMEKLENEAKARMERKTPKNVP
        PS GS+  SS+ ED +KP W+++TK+ + +  GGN SW+CNFC    KSSYTRVRAHLLKI+ +G+G CLKVT +D+ +M+KL+ EA AR+     K VP
Subjt:  PSIGST--SSNIEDDSKPLWQYVTKIQKLSGGGGNFSWQCNFCPVIKKSSYTRVRAHLLKINSQGIGVCLKVTPKDIAEMEKLENEAKARMERKTPKNVP

Query:  LPPTPSVINIGGVNVSNSPITSEQKKRKGSGPSGSISAHEKS
        LPP+                + + KKRK    +GS+SA EK+
Subjt:  LPPTPSVINIGGVNVSNSPITSEQKKRKGSGPSGSISAHEKS

A0A5B7AFB0 Uncharacterized protein8.7e-3050.61Show/hide
Query:  STSSNIEDDSKPLWQYVTKIQKLSGGGGNFSWQCNFCPVIKKSSYTRVRAHLLKINSQGIGVCLKVTPKDIAEMEKLENEAKARMERKTPKNVPLPPTPS
        S+SS  ED +KPLW+YV K  KLS GGGN SWQCNFC  +KKSSYTRVRAHLL++  QGI  C KVT KDI EM+KLE+E K R++    K VPLP   S
Subjt:  STSSNIEDDSKPLWQYVTKIQKLSGGGGNFSWQCNFCPVIKKSSYTRVRAHLLKINSQGIGVCLKVTPKDIAEMEKLENEAKARMERKTPKNVPLPPTPS

Query:  VINIGGVNVSNSPITSEQKKRKGSGPSGSISAHEKSFNKTSQDQFVVVLDTLLNTKQPLPTHAA
        +I++ G + S S    + KKRK +  SGS +  EK+FN  + +Q    +  +  +   LP H A
Subjt:  VINIGGVNVSNSPITSEQKKRKGSGPSGSISAHEKSFNKTSQDQFVVVLDTLLNTKQPLPTHAA

A0A5B7C0N1 BED-type domain-containing protein (Fragment)2.6e-2651.49Show/hide
Query:  SKPLWQYVTKIQKLSGGGGNFSWQCNFCPVIKKSSYTRVRAHLLKINSQGIGVCLKVTPKDIAEMEKLENEAKARMERKTPKNVPLPPTPSVINIGGVNV
        +KPLW+YVTK ++L+ GGGN SWQCNFC  +KKSSYTRVRAHL++I   GI  C KVT  +++EM+KLE+E   R     PK VPLP  PS +++G    
Subjt:  SKPLWQYVTKIQKLSGGGGNFSWQCNFCPVIKKSSYTRVRAHLLKINSQGIGVCLKVTPKDIAEMEKLENEAKARMERKTPKNVPLPPTPSVINIGGVNV

Query:  SNSPITSEQKKRKGSGP-----SGSISAHEKSFN
               + KKRK SG      SGS SA  K+FN
Subjt:  SNSPITSEQKKRKGSGP-----SGSISAHEKSFN

A0A6J1DT13 uncharacterized protein LOC111023231 isoform X13.0e-3052.8Show/hide
Query:  SSSSHCQSSSPSIGSTSSNIEDDSKPLWQYVTKIQKLSGGGGNFSWQCNFCPVIKKSSYTRVRAHLLKINSQGIGVCLKVTPKDIAEMEKLENEAKARME
        S SS  +  S SI  + SNIED+  PLW+YVTK Q+L+  GGN SWQCNFC   K+SSYTRVRAHL+K++  GIG+C KVT KD+AEM++LE+EAK R E
Subjt:  SSSSHCQSSSPSIGSTSSNIEDDSKPLWQYVTKIQKLSGGGGNFSWQCNFCPVIKKSSYTRVRAHLLKINSQGIGVCLKVTPKDIAEMEKLENEAKARME

Query:  RKTPKNVPLPPTP--SVINIGGV-NVSNSPITSEQKKRKGSGPSGSISAHEKSFNKTSQDQ
        +  PK V LPP       + G + + S S  T++ KKRK S      S  EKSFN T+ DQ
Subjt:  RKTPKNVPLPPTP--SVINIGGV-NVSNSPITSEQKKRKGSGPSGSISAHEKSFNKTSQDQ

A0A6J1DUJ6 uncharacterized protein LOC111023231 isoform X23.0e-3052.8Show/hide
Query:  SSSSHCQSSSPSIGSTSSNIEDDSKPLWQYVTKIQKLSGGGGNFSWQCNFCPVIKKSSYTRVRAHLLKINSQGIGVCLKVTPKDIAEMEKLENEAKARME
        S SS  +  S SI  + SNIED+  PLW+YVTK Q+L+  GGN SWQCNFC   K+SSYTRVRAHL+K++  GIG+C KVT KD+AEM++LE+EAK R E
Subjt:  SSSSHCQSSSPSIGSTSSNIEDDSKPLWQYVTKIQKLSGGGGNFSWQCNFCPVIKKSSYTRVRAHLLKINSQGIGVCLKVTPKDIAEMEKLENEAKARME

Query:  RKTPKNVPLPPTP--SVINIGGV-NVSNSPITSEQKKRKGSGPSGSISAHEKSFNKTSQDQ
        +  PK V LPP       + G + + S S  T++ KKRK S      S  EKSFN T+ DQ
Subjt:  RKTPKNVPLPPTP--SVINIGGV-NVSNSPITSEQKKRKGSGPSGSISAHEKSFNKTSQDQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCATCTTCTAGCCATTGTCAATCATCAAGTCCTTCCATAGGCTCAACCTCCTCTAATATTGAAGATGATTCAAAACCCTTATGGCAATATGTGACTAAAATTCAAAA
ATTGAGTGGTGGGGGTGGAAATTTTTCATGGCAATGCAATTTTTGTCCTGTCATAAAGAAGAGTTCTTACACAAGAGTTAGGGCTCATTTGTTGAAGATTAATAGTCAAG
GAATTGGAGTATGTCTAAAGGTCACTCCTAAAGATATTGCCGAAATGGAAAAATTGGAAAATGAGGCCAAAGCTCGAATGGAAAGAAAGACTCCAAAAAATGTTCCTTTA
CCACCTACGCCTTCAGTGATAAATATTGGTGGTGTTAATGTAAGTAATTCCCCTATTACAAGTGAGCAAAAGAAAAGAAAAGGTAGTGGACCTAGTGGTAGTATAAGTGC
ACATGAAAAATCATTCAACAAGACATCACAAGACCAATTTGTTGTGGTTTTAGACACGTTGCTAAACACGAAGCAACCTTTACCCACACACGCAGCGGAAAGAATCGGAG
TTTAA
mRNA sequenceShow/hide mRNA sequence
ATGTCATCTTCTAGCCATTGTCAATCATCAAGTCCTTCCATAGGCTCAACCTCCTCTAATATTGAAGATGATTCAAAACCCTTATGGCAATATGTGACTAAAATTCAAAA
ATTGAGTGGTGGGGGTGGAAATTTTTCATGGCAATGCAATTTTTGTCCTGTCATAAAGAAGAGTTCTTACACAAGAGTTAGGGCTCATTTGTTGAAGATTAATAGTCAAG
GAATTGGAGTATGTCTAAAGGTCACTCCTAAAGATATTGCCGAAATGGAAAAATTGGAAAATGAGGCCAAAGCTCGAATGGAAAGAAAGACTCCAAAAAATGTTCCTTTA
CCACCTACGCCTTCAGTGATAAATATTGGTGGTGTTAATGTAAGTAATTCCCCTATTACAAGTGAGCAAAAGAAAAGAAAAGGTAGTGGACCTAGTGGTAGTATAAGTGC
ACATGAAAAATCATTCAACAAGACATCACAAGACCAATTTGTTGTGGTTTTAGACACGTTGCTAAACACGAAGCAACCTTTACCCACACACGCAGCGGAAAGAATCGGAG
TTTAA
Protein sequenceShow/hide protein sequence
MSSSSHCQSSSPSIGSTSSNIEDDSKPLWQYVTKIQKLSGGGGNFSWQCNFCPVIKKSSYTRVRAHLLKINSQGIGVCLKVTPKDIAEMEKLENEAKARMERKTPKNVPL
PPTPSVINIGGVNVSNSPITSEQKKRKGSGPSGSISAHEKSFNKTSQDQFVVVLDTLLNTKQPLPTHAAERIGV