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Lag0017880 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0017880
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr5:10722023..10722889
RNA-Seq ExpressionLag0017880
SyntenyLag0017880
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
PON46472.1 hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii]2.4e-1628.11Show/hide
Query:  SFSSVDINRVYRIKAPLNPRGNDVIRNPSAKQMKEVLKPLANKGVQWKESQTKVKLLVPSDVKPESAVWLYFIKNRLMPITHDNTISVDRVMLLYCLMKR
        S+S   IN V+ +  P++   ++ I+N + + +  VL+ +A  G +W  S       + S + P + VW +F+K+RL+P TH  T+S DR++LL+ ++  
Subjt:  SFSSVDINRVYRIKAPLNPRGNDVIRNPSAKQMKEVLKPLANKGVQWKESQTKVKLLVPSDVKPESAVWLYFIKNRLMPITHDNTISVDRVMLLYCLMKR

Query:  LEINMGSIIRDGILACGRKRACKLFFGSLITQLCQ--------RRKDKASTSQATPPAGPNVASPSQHTHFTGPSPESEALAIAYRQLDQIRENLKT---
          IN+G +I   I AC  ++   LFF SLIT+LC+          +   +T +    A   +A          PS    A A + R    I + LK    
Subjt:  LEINMGSIIRDGILACGRKRACKLFFGSLITQLCQ--------RRKDKASTSQATPPAGPNVASPSQHTHFTGPSPESEALAIAYRQLDQIRENLKT---

Query:  -------------------------YWAYAKERDEAIRKFYLSIAPSIAPVFPNFPQSLLPQEDKDSDEEENKENDDEDDE
                                 +WAY+KERD A++K   +      P FP FPQ +L   D + + E +K+  +E  E
Subjt:  -------------------------YWAYAKERDEAIRKFYLSIAPSIAPVFPNFPQSLLPQEDKDSDEEENKENDDEDDE

PON78020.1 hypothetical protein PanWU01x14_023740 [Parasponia andersonii]3.7e-1727.99Show/hide
Query:  SFSSVDINRVYRIKAPLNPRGNDVIRNPSAKQMKEVLKPLANKGVQWKESQTKVKLLVPSDVKPESAVWLYFIKNRLMPITHDNTISVDRVMLLYCLMKR
        S+S   IN V+ +  P++   ++ I N +  ++  VL+ +A  G +W  S       + S + P + VW +F+K+RL+P TH   +S DR++LL+ ++  
Subjt:  SFSSVDINRVYRIKAPLNPRGNDVIRNPSAKQMKEVLKPLANKGVQWKESQTKVKLLVPSDVKPESAVWLYFIKNRLMPITHDNTISVDRVMLLYCLMKR

Query:  LEINMGSIIRDGILACGRKRACKLFFGSLITQLCQ-----------------------RRKDKASTSQATPPAGPNVASPSQHTHFTGPSPESEALAIAY
          IN+G +I   I AC  ++   LFF SLIT+LC+                       R   +  T     P+    A+ S          + +AL    
Subjt:  LEINMGSIIRDGILACGRKRACKLFFGSLITQLCQ-----------------------RRKDKASTSQATPPAGPNVASPSQHTHFTGPSPESEALAIAY

Query:  RQLDQIRENLKTYWAYAKERDEAIRKFYLSIAPSIAPVFPNFPQSLLPQEDKDSDEEENKENDDEDDE
         Q +   +  + +WAY+KERD A++K   +      P FP FPQ +L   D + + E +K+  +E  E
Subjt:  RQLDQIRENLKTYWAYAKERDEAIRKFYLSIAPSIAPVFPNFPQSLLPQEDKDSDEEENKENDDEDDE

XP_024971944.1 uncharacterized protein LOC112510826 [Cynara cardunculus var. scolymus]4.3e-1333.59Show/hide
Query:  INRVYRIKAPLNPRGNDVIRNPSAKQMKEVLKPLANKGVQW-KESQTKVKLLVPSDVKPESAVWLYFIKNRLMPITHDNTISVDRVMLLYCLMKRLEINM
        IN++  +  P       + ++ S  +++E+ + L   G++W   S   ++    S++KP + VW+ FI+  L P THD++ISV++++LLYC++    IN+
Subjt:  INRVYRIKAPLNPRGNDVIRNPSAKQMKEVLKPLANKGVQW-KESQTKVKLLVPSDVKPESAVWLYFIKNRLMPITHDNTISVDRVMLLYCLMKRLEINM

Query:  GSIIRDGILACGRKRACKLFFGSLITQL
        G ++   IL C ++R  KLFF SLI +L
Subjt:  GSIIRDGILACGRKRACKLFFGSLITQL

XP_038876674.1 chromatin assembly factor 1 subunit A-like, partial [Benincasa hispida]1.9e-1337.61Show/hide
Query:  SFSSVDINRVYRIKAPLNPRGNDVIRNPSAKQMKEVLKPLANKGVQWKESQTKVKLLVPSDVKPESAVWLYFIKNRLMPITHDNTISVDRVMLLYCLMKR
        SFS+ DIN +Y++K      GN +I +P+ +QM++ L+ L   G++W  S   V  L    +  E  +W+Y +K RL+  THD T+S DRVM  YC+++ 
Subjt:  SFSSVDINRVYRIKAPLNPRGNDVIRNPSAKQMKEVLKPLANKGVQWKESQTKVKLLVPSDVKPESAVWLYFIKNRLMPITHDNTISVDRVMLLYCLMKR

Query:  LEINMGSII
        + I++G +I
Subjt:  LEINMGSII

XP_038904385.1 uncharacterized protein LOC120090747 [Benincasa hispida]8.6e-1437.04Show/hide
Query:  FSSVDINRVYRIKAPLNPRGNDVIRNPSAKQMKEVLKPLANKGVQWKESQTKVKLLVPSDVKPESAVWLYFIKNRLMPITHDNTISVDRVMLLYCLMKRL
        FS+ DIN +Y++K   +  GN +I +P  ++M++ L+ L   G QW  S   +K L  S + PE+ +W+Y +K R++P +HD T+S DRVM  YC+   +
Subjt:  FSSVDINRVYRIKAPLNPRGNDVIRNPSAKQMKEVLKPLANKGVQWKESQTKVKLLVPSDVKPESAVWLYFIKNRLMPITHDNTISVDRVMLLYCLMKRL

Query:  EINMGSII
         I++  +I
Subjt:  EINMGSII

TrEMBL top hitse value%identityAlignment
A0A2P5AGA5 Uncharacterized protein (Fragment)2.7e-1333.33Show/hide
Query:  SFSSVDINRVYRIKAPLNPRGNDVIRNPSAKQMKEVLKPLANKGVQWKESQTKVKLLVPSDVKPESAVWLYFIKNRLMPITHDNTISVDRVMLLYCLMKR
        S+S   IN V+ +  P++   ++ I N +   +  VL+ +A  G +W  S       + S + P + VW +F+K+ L+P TH  T+S DR++LL+ ++  
Subjt:  SFSSVDINRVYRIKAPLNPRGNDVIRNPSAKQMKEVLKPLANKGVQWKESQTKVKLLVPSDVKPESAVWLYFIKNRLMPITHDNTISVDRVMLLYCLMKR

Query:  LEINMGSIIRDGILACGRKRACKLFFGSLITQLCQRRK
          IN+G +I   I AC  ++   LFF SLIT+LC+  +
Subjt:  LEINMGSIIRDGILACGRKRACKLFFGSLITQLCQRRK

A0A2P5BCG4 Uncharacterized protein (Fragment)1.2e-1628.11Show/hide
Query:  SFSSVDINRVYRIKAPLNPRGNDVIRNPSAKQMKEVLKPLANKGVQWKESQTKVKLLVPSDVKPESAVWLYFIKNRLMPITHDNTISVDRVMLLYCLMKR
        S+S   IN V+ +  P++   ++ I+N + + +  VL+ +A  G +W  S       + S + P + VW +F+K+RL+P TH  T+S DR++LL+ ++  
Subjt:  SFSSVDINRVYRIKAPLNPRGNDVIRNPSAKQMKEVLKPLANKGVQWKESQTKVKLLVPSDVKPESAVWLYFIKNRLMPITHDNTISVDRVMLLYCLMKR

Query:  LEINMGSIIRDGILACGRKRACKLFFGSLITQLCQ--------RRKDKASTSQATPPAGPNVASPSQHTHFTGPSPESEALAIAYRQLDQIRENLKT---
          IN+G +I   I AC  ++   LFF SLIT+LC+          +   +T +    A   +A          PS    A A + R    I + LK    
Subjt:  LEINMGSIIRDGILACGRKRACKLFFGSLITQLCQ--------RRKDKASTSQATPPAGPNVASPSQHTHFTGPSPESEALAIAYRQLDQIRENLKT---

Query:  -------------------------YWAYAKERDEAIRKFYLSIAPSIAPVFPNFPQSLLPQEDKDSDEEENKENDDEDDE
                                 +WAY+KERD A++K   +      P FP FPQ +L   D + + E +K+  +E  E
Subjt:  -------------------------YWAYAKERDEAIRKFYLSIAPSIAPVFPNFPQSLLPQEDKDSDEEENKENDDEDDE

A0A2P5CEY2 Uncharacterized protein4.6e-1330.73Show/hide
Query:  PESAVWLYFIKNRLMPITHDNTISVDRVMLLYCLMKRLEINMGSIIRDGILACGRKRACKLFFGSLITQLCQR-------RKDKAS-TSQATPPAGPNVA
        P + VW +F+K+RL+P TH  T+S DR++LLY ++    IN+G +I   I AC  +++  LFF SLITQLC+         ++K   T +    A   + 
Subjt:  PESAVWLYFIKNRLMPITHDNTISVDRVMLLYCLMKRLEINMGSIIRDGILACGRKRACKLFFGSLITQLCQR-------RKDKAS-TSQATPPAGPNVA

Query:  SPSQHTHFTGPSPESEALAIAYRQLDQIRENLKT----------------------------YWAYAKERDEAIRKFYLSIAPSIAPVFPNFPQSLLPQE
           Q      PS     +A + R    I + LK                             +WAY+KERD A++K   +      P FP FPQ LL   
Subjt:  SPSQHTHFTGPSPESEALAIAYRQLDQIRENLKT----------------------------YWAYAKERDEAIRKFYLSIAPSIAPVFPNFPQSLLPQE

Query:  DKDSDEEENKENDDEDDE
        D + + E +K+  +E  E
Subjt:  DKDSDEEENKENDDEDDE

A0A2P5DXM3 Uncharacterized protein1.8e-1727.99Show/hide
Query:  SFSSVDINRVYRIKAPLNPRGNDVIRNPSAKQMKEVLKPLANKGVQWKESQTKVKLLVPSDVKPESAVWLYFIKNRLMPITHDNTISVDRVMLLYCLMKR
        S+S   IN V+ +  P++   ++ I N +  ++  VL+ +A  G +W  S       + S + P + VW +F+K+RL+P TH   +S DR++LL+ ++  
Subjt:  SFSSVDINRVYRIKAPLNPRGNDVIRNPSAKQMKEVLKPLANKGVQWKESQTKVKLLVPSDVKPESAVWLYFIKNRLMPITHDNTISVDRVMLLYCLMKR

Query:  LEINMGSIIRDGILACGRKRACKLFFGSLITQLCQ-----------------------RRKDKASTSQATPPAGPNVASPSQHTHFTGPSPESEALAIAY
          IN+G +I   I AC  ++   LFF SLIT+LC+                       R   +  T     P+    A+ S          + +AL    
Subjt:  LEINMGSIIRDGILACGRKRACKLFFGSLITQLCQ-----------------------RRKDKASTSQATPPAGPNVASPSQHTHFTGPSPESEALAIAY

Query:  RQLDQIRENLKTYWAYAKERDEAIRKFYLSIAPSIAPVFPNFPQSLLPQEDKDSDEEENKENDDEDDE
         Q +   +  + +WAY+KERD A++K   +      P FP FPQ +L   D + + E +K+  +E  E
Subjt:  RQLDQIRENLKTYWAYAKERDEAIRKFYLSIAPSIAPVFPNFPQSLLPQEDKDSDEEENKENDDEDDE

A0A5A7U0U4 Uncharacterized protein7.8e-1332.86Show/hide
Query:  SFSSVDINRVYRIKAPLNPRGNDVIRNPSAKQMKEVLKPLANKGVQWKESQTKVKLLVPSDVKPESAVWLYFIKNRLMPITHDNTISVDRVMLLYCLMKR
        +F    IN +Y +K   N  G+ + +NP  + ++E L+     G +W +  T +  L P ++  E++VWL FIK  +MP  HDN IS++R+MLLY ++  
Subjt:  SFSSVDINRVYRIKAPLNPRGNDVIRNPSAKQMKEVLKPLANKGVQWKESQTKVKLLVPSDVKPESAVWLYFIKNRLMPITHDNTISVDRVMLLYCLMKR

Query:  LEINMGSIIRDGILACGRKRACKLFFGSLITQLCQRRKDK
        + +N+G II + + A  +       F  LI QL +R+ ++
Subjt:  LEINMGSIIRDGILACGRKRACKLFFGSLITQLCQRRKDK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTAGTTTCTCCTCAGTCGACATTAATAGGGTGTACAGGATCAAGGCACCCTTGAATCCGAGAGGGAATGATGTGATAAGGAACCCTTCGGCCAAGCAAATGAAGGA
AGTTCTGAAACCCTTGGCCAACAAGGGGGTTCAGTGGAAAGAATCACAGACAAAAGTGAAGTTGTTAGTGCCAAGCGACGTAAAGCCAGAATCGGCAGTTTGGCTTTACT
TCATAAAAAACCGTTTGATGCCAATCACCCATGACAACACGATTTCAGTGGATAGAGTGATGCTACTCTATTGCCTTATGAAGAGGTTGGAGATCAACATGGGGAGCATT
ATCAGGGATGGGATTTTAGCCTGTGGGAGAAAGCGAGCATGCAAGCTTTTCTTTGGATCACTCATCACCCAGCTTTGCCAAAGGAGGAAAGACAAAGCCTCTACATCTCA
GGCTACTCCACCTGCAGGGCCGAATGTTGCCTCTCCATCCCAGCACACTCATTTTACAGGGCCCTCACCAGAATCGGAAGCCCTAGCTATTGCCTACCGCCAGCTAGATC
AAATCAGAGAGAACCTGAAGACTTATTGGGCATATGCAAAGGAGCGGGATGAAGCCATTAGAAAGTTTTACCTCTCTATAGCCCCGAGTATCGCTCCAGTCTTTCCTAAT
TTCCCTCAGTCGCTGCTGCCCCAAGAAGACAAGGATTCTGATGAAGAGGAAAATAAAGAGAATGACGATGAAGATGATGAAGAGAAAGAGAGTTCCTCGGACGAGGAATA
G
mRNA sequenceShow/hide mRNA sequence
ATGGCTAGTTTCTCCTCAGTCGACATTAATAGGGTGTACAGGATCAAGGCACCCTTGAATCCGAGAGGGAATGATGTGATAAGGAACCCTTCGGCCAAGCAAATGAAGGA
AGTTCTGAAACCCTTGGCCAACAAGGGGGTTCAGTGGAAAGAATCACAGACAAAAGTGAAGTTGTTAGTGCCAAGCGACGTAAAGCCAGAATCGGCAGTTTGGCTTTACT
TCATAAAAAACCGTTTGATGCCAATCACCCATGACAACACGATTTCAGTGGATAGAGTGATGCTACTCTATTGCCTTATGAAGAGGTTGGAGATCAACATGGGGAGCATT
ATCAGGGATGGGATTTTAGCCTGTGGGAGAAAGCGAGCATGCAAGCTTTTCTTTGGATCACTCATCACCCAGCTTTGCCAAAGGAGGAAAGACAAAGCCTCTACATCTCA
GGCTACTCCACCTGCAGGGCCGAATGTTGCCTCTCCATCCCAGCACACTCATTTTACAGGGCCCTCACCAGAATCGGAAGCCCTAGCTATTGCCTACCGCCAGCTAGATC
AAATCAGAGAGAACCTGAAGACTTATTGGGCATATGCAAAGGAGCGGGATGAAGCCATTAGAAAGTTTTACCTCTCTATAGCCCCGAGTATCGCTCCAGTCTTTCCTAAT
TTCCCTCAGTCGCTGCTGCCCCAAGAAGACAAGGATTCTGATGAAGAGGAAAATAAAGAGAATGACGATGAAGATGATGAAGAGAAAGAGAGTTCCTCGGACGAGGAATA
G
Protein sequenceShow/hide protein sequence
MASFSSVDINRVYRIKAPLNPRGNDVIRNPSAKQMKEVLKPLANKGVQWKESQTKVKLLVPSDVKPESAVWLYFIKNRLMPITHDNTISVDRVMLLYCLMKRLEINMGSI
IRDGILACGRKRACKLFFGSLITQLCQRRKDKASTSQATPPAGPNVASPSQHTHFTGPSPESEALAIAYRQLDQIRENLKTYWAYAKERDEAIRKFYLSIAPSIAPVFPN
FPQSLLPQEDKDSDEEENKENDDEDDEEKESSSDEE