; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0017890 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0017890
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRetrotran_gag_3 domain-containing protein
Genome locationchr5:10962916..10963677
RNA-Seq ExpressionLag0017890
SyntenyLag0017890
Gene Ontology termsGO:0005488 - binding (molecular function)
InterPro domainsIPR029472 - Retrotransposon Copia-like, N-terminal


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0049700.1 T4.5 [Cucumis melo var. makuwa]1.5e-8270.08Show/hide
Query:  TSSAEKDSHSPIFLLSNICNLISLRLDSTNFMLWKFQLQSILKAHKLFGFIDGSIVCPPKTISASSSSSSTSVDPPPTPAPSSVFATVSAPPLINPLYED
        +SSAEKDS SPIFLLSNICNLIS+RLDSTNF+LWKFQL +ILKAHKL+GFIDG+  CPP+T    ++SSSTS                + PP  NP YED
Subjt:  TSSAEKDSHSPIFLLSNICNLISLRLDSTNFMLWKFQLQSILKAHKLFGFIDGSIVCPPKTISASSSSSSTSVDPPPTPAPSSVFATVSAPPLINPLYED

Query:  WIAKDQALMTLINATLSPAALAYVVGCTSSKQAWEVLEKHYSSSSRTNIVNLKSDLQSISKKPGESIDDYIKRIKELKDKLANVSVIIDEEDILIYTLNG
        WIAKDQALMT+INATLSP ALAYVVG TSSKQ W+VL K YSS SR+N+VNLKSDLQ+I KKP ESID YIKRIKE+KDKLANVS  I+EED+LIY LNG
Subjt:  WIAKDQALMTLINATLSPAALAYVVGCTSSKQAWEVLEKHYSSSSRTNIVNLKSDLQSISKKPGESIDDYIKRIKELKDKLANVSVIIDEEDILIYTLNG

Query:  LPSDYNAFRTSMRTISQTTTFNELHVLLKSEESAIEKNSKPEDT
        LP++YN FRTSMRT SQ  TF ELHVLL++EESA+ K SK +D+
Subjt:  LPSDYNAFRTSMRTISQTTTFNELHVLLKSEESAIEKNSKPEDT

KAE8645659.1 hypothetical protein Csa_020439 [Cucumis sativus]4.7e-8169.67Show/hide
Query:  TSSAEKDSHSPIFLLSNICNLISLRLDSTNFMLWKFQLQSILKAHKLFGFIDGSIVCPPKTISASSSSSSTSVDPPPTPAPSSVFATVSAPPLINPLYED
        +SSAEKDS SPIFLLSNICNLIS+RLDSTNF+LWKFQL +ILKAHKLFGF+DG+  CP       +S S+TS  PP T                NPLYED
Subjt:  TSSAEKDSHSPIFLLSNICNLISLRLDSTNFMLWKFQLQSILKAHKLFGFIDGSIVCPPKTISASSSSSSTSVDPPPTPAPSSVFATVSAPPLINPLYED

Query:  WIAKDQALMTLINATLSPAALAYVVGCTSSKQAWEVLEKHYSSSSRTNIVNLKSDLQSISKKPGESIDDYIKRIKELKDKLANVSVIIDEEDILIYTLNG
        WIAKDQALMT+INATLSP ALAYVVG TSSKQ W+VL K YSS SR+N+VNLKSDLQ+I KKP ESID YIKRIKE+KDKLANVS  I+EED+LIY LNG
Subjt:  WIAKDQALMTLINATLSPAALAYVVGCTSSKQAWEVLEKHYSSSSRTNIVNLKSDLQSISKKPGESIDDYIKRIKELKDKLANVSVIIDEEDILIYTLNG

Query:  LPSDYNAFRTSMRTISQTTTFNELHVLLKSEESAIEKNSKPEDT
        LP++YN FRTSMRT SQ  TF ELHVLL++EESA+ K SK +D+
Subjt:  LPSDYNAFRTSMRTISQTTTFNELHVLLKSEESAIEKNSKPEDT

XP_008448007.1 PREDICTED: uncharacterized protein LOC103490319 isoform X2 [Cucumis melo]1.5e-8270.08Show/hide
Query:  TSSAEKDSHSPIFLLSNICNLISLRLDSTNFMLWKFQLQSILKAHKLFGFIDGSIVCPPKTISASSSSSSTSVDPPPTPAPSSVFATVSAPPLINPLYED
        +SSAEKDS SPIFLLSNICNLIS+RLDSTNF+LWKFQL +ILKAHKL+GFIDG+  CPP+T    ++SSSTS                + PP  NP YED
Subjt:  TSSAEKDSHSPIFLLSNICNLISLRLDSTNFMLWKFQLQSILKAHKLFGFIDGSIVCPPKTISASSSSSSTSVDPPPTPAPSSVFATVSAPPLINPLYED

Query:  WIAKDQALMTLINATLSPAALAYVVGCTSSKQAWEVLEKHYSSSSRTNIVNLKSDLQSISKKPGESIDDYIKRIKELKDKLANVSVIIDEEDILIYTLNG
        WIAKDQALMT+INATLSP ALAYVVG TSSKQ W+VL K YSS SR+N+VNLKSDLQ+I KKP ESID YIKRIKE+KDKLANVS  I+EED+LIY LNG
Subjt:  WIAKDQALMTLINATLSPAALAYVVGCTSSKQAWEVLEKHYSSSSRTNIVNLKSDLQSISKKPGESIDDYIKRIKELKDKLANVSVIIDEEDILIYTLNG

Query:  LPSDYNAFRTSMRTISQTTTFNELHVLLKSEESAIEKNSKPEDT
        LP++YN FRTSMRT SQ  TF ELHVLL++EESA+ K SK +D+
Subjt:  LPSDYNAFRTSMRTISQTTTFNELHVLLKSEESAIEKNSKPEDT

XP_008448008.1 PREDICTED: uncharacterized protein LOC103490319 isoform X3 [Cucumis melo]1.5e-8270.08Show/hide
Query:  TSSAEKDSHSPIFLLSNICNLISLRLDSTNFMLWKFQLQSILKAHKLFGFIDGSIVCPPKTISASSSSSSTSVDPPPTPAPSSVFATVSAPPLINPLYED
        +SSAEKDS SPIFLLSNICNLIS+RLDSTNF+LWKFQL +ILKAHKL+GFIDG+  CPP+T    ++SSSTS                + PP  NP YED
Subjt:  TSSAEKDSHSPIFLLSNICNLISLRLDSTNFMLWKFQLQSILKAHKLFGFIDGSIVCPPKTISASSSSSSTSVDPPPTPAPSSVFATVSAPPLINPLYED

Query:  WIAKDQALMTLINATLSPAALAYVVGCTSSKQAWEVLEKHYSSSSRTNIVNLKSDLQSISKKPGESIDDYIKRIKELKDKLANVSVIIDEEDILIYTLNG
        WIAKDQALMT+INATLSP ALAYVVG TSSKQ W+VL K YSS SR+N+VNLKSDLQ+I KKP ESID YIKRIKE+KDKLANVS  I+EED+LIY LNG
Subjt:  WIAKDQALMTLINATLSPAALAYVVGCTSSKQAWEVLEKHYSSSSRTNIVNLKSDLQSISKKPGESIDDYIKRIKELKDKLANVSVIIDEEDILIYTLNG

Query:  LPSDYNAFRTSMRTISQTTTFNELHVLLKSEESAIEKNSKPEDT
        LP++YN FRTSMRT SQ  TF ELHVLL++EESA+ K SK +D+
Subjt:  LPSDYNAFRTSMRTISQTTTFNELHVLLKSEESAIEKNSKPEDT

XP_016900446.1 PREDICTED: uncharacterized protein LOC103490319 isoform X1 [Cucumis melo]1.5e-8270.08Show/hide
Query:  TSSAEKDSHSPIFLLSNICNLISLRLDSTNFMLWKFQLQSILKAHKLFGFIDGSIVCPPKTISASSSSSSTSVDPPPTPAPSSVFATVSAPPLINPLYED
        +SSAEKDS SPIFLLSNICNLIS+RLDSTNF+LWKFQL +ILKAHKL+GFIDG+  CPP+T    ++SSSTS                + PP  NP YED
Subjt:  TSSAEKDSHSPIFLLSNICNLISLRLDSTNFMLWKFQLQSILKAHKLFGFIDGSIVCPPKTISASSSSSSTSVDPPPTPAPSSVFATVSAPPLINPLYED

Query:  WIAKDQALMTLINATLSPAALAYVVGCTSSKQAWEVLEKHYSSSSRTNIVNLKSDLQSISKKPGESIDDYIKRIKELKDKLANVSVIIDEEDILIYTLNG
        WIAKDQALMT+INATLSP ALAYVVG TSSKQ W+VL K YSS SR+N+VNLKSDLQ+I KKP ESID YIKRIKE+KDKLANVS  I+EED+LIY LNG
Subjt:  WIAKDQALMTLINATLSPAALAYVVGCTSSKQAWEVLEKHYSSSSRTNIVNLKSDLQSISKKPGESIDDYIKRIKELKDKLANVSVIIDEEDILIYTLNG

Query:  LPSDYNAFRTSMRTISQTTTFNELHVLLKSEESAIEKNSKPEDT
        LP++YN FRTSMRT SQ  TF ELHVLL++EESA+ K SK +D+
Subjt:  LPSDYNAFRTSMRTISQTTTFNELHVLLKSEESAIEKNSKPEDT

TrEMBL top hitse value%identityAlignment
A0A1S3BI58 uncharacterized protein LOC103490319 isoform X27.1e-8370.08Show/hide
Query:  TSSAEKDSHSPIFLLSNICNLISLRLDSTNFMLWKFQLQSILKAHKLFGFIDGSIVCPPKTISASSSSSSTSVDPPPTPAPSSVFATVSAPPLINPLYED
        +SSAEKDS SPIFLLSNICNLIS+RLDSTNF+LWKFQL +ILKAHKL+GFIDG+  CPP+T    ++SSSTS                + PP  NP YED
Subjt:  TSSAEKDSHSPIFLLSNICNLISLRLDSTNFMLWKFQLQSILKAHKLFGFIDGSIVCPPKTISASSSSSSTSVDPPPTPAPSSVFATVSAPPLINPLYED

Query:  WIAKDQALMTLINATLSPAALAYVVGCTSSKQAWEVLEKHYSSSSRTNIVNLKSDLQSISKKPGESIDDYIKRIKELKDKLANVSVIIDEEDILIYTLNG
        WIAKDQALMT+INATLSP ALAYVVG TSSKQ W+VL K YSS SR+N+VNLKSDLQ+I KKP ESID YIKRIKE+KDKLANVS  I+EED+LIY LNG
Subjt:  WIAKDQALMTLINATLSPAALAYVVGCTSSKQAWEVLEKHYSSSSRTNIVNLKSDLQSISKKPGESIDDYIKRIKELKDKLANVSVIIDEEDILIYTLNG

Query:  LPSDYNAFRTSMRTISQTTTFNELHVLLKSEESAIEKNSKPEDT
        LP++YN FRTSMRT SQ  TF ELHVLL++EESA+ K SK +D+
Subjt:  LPSDYNAFRTSMRTISQTTTFNELHVLLKSEESAIEKNSKPEDT

A0A1S3BIR3 uncharacterized protein LOC103490319 isoform X37.1e-8370.08Show/hide
Query:  TSSAEKDSHSPIFLLSNICNLISLRLDSTNFMLWKFQLQSILKAHKLFGFIDGSIVCPPKTISASSSSSSTSVDPPPTPAPSSVFATVSAPPLINPLYED
        +SSAEKDS SPIFLLSNICNLIS+RLDSTNF+LWKFQL +ILKAHKL+GFIDG+  CPP+T    ++SSSTS                + PP  NP YED
Subjt:  TSSAEKDSHSPIFLLSNICNLISLRLDSTNFMLWKFQLQSILKAHKLFGFIDGSIVCPPKTISASSSSSSTSVDPPPTPAPSSVFATVSAPPLINPLYED

Query:  WIAKDQALMTLINATLSPAALAYVVGCTSSKQAWEVLEKHYSSSSRTNIVNLKSDLQSISKKPGESIDDYIKRIKELKDKLANVSVIIDEEDILIYTLNG
        WIAKDQALMT+INATLSP ALAYVVG TSSKQ W+VL K YSS SR+N+VNLKSDLQ+I KKP ESID YIKRIKE+KDKLANVS  I+EED+LIY LNG
Subjt:  WIAKDQALMTLINATLSPAALAYVVGCTSSKQAWEVLEKHYSSSSRTNIVNLKSDLQSISKKPGESIDDYIKRIKELKDKLANVSVIIDEEDILIYTLNG

Query:  LPSDYNAFRTSMRTISQTTTFNELHVLLKSEESAIEKNSKPEDT
        LP++YN FRTSMRT SQ  TF ELHVLL++EESA+ K SK +D+
Subjt:  LPSDYNAFRTSMRTISQTTTFNELHVLLKSEESAIEKNSKPEDT

A0A1S4DWT9 uncharacterized protein LOC103490319 isoform X17.1e-8370.08Show/hide
Query:  TSSAEKDSHSPIFLLSNICNLISLRLDSTNFMLWKFQLQSILKAHKLFGFIDGSIVCPPKTISASSSSSSTSVDPPPTPAPSSVFATVSAPPLINPLYED
        +SSAEKDS SPIFLLSNICNLIS+RLDSTNF+LWKFQL +ILKAHKL+GFIDG+  CPP+T    ++SSSTS                + PP  NP YED
Subjt:  TSSAEKDSHSPIFLLSNICNLISLRLDSTNFMLWKFQLQSILKAHKLFGFIDGSIVCPPKTISASSSSSSTSVDPPPTPAPSSVFATVSAPPLINPLYED

Query:  WIAKDQALMTLINATLSPAALAYVVGCTSSKQAWEVLEKHYSSSSRTNIVNLKSDLQSISKKPGESIDDYIKRIKELKDKLANVSVIIDEEDILIYTLNG
        WIAKDQALMT+INATLSP ALAYVVG TSSKQ W+VL K YSS SR+N+VNLKSDLQ+I KKP ESID YIKRIKE+KDKLANVS  I+EED+LIY LNG
Subjt:  WIAKDQALMTLINATLSPAALAYVVGCTSSKQAWEVLEKHYSSSSRTNIVNLKSDLQSISKKPGESIDDYIKRIKELKDKLANVSVIIDEEDILIYTLNG

Query:  LPSDYNAFRTSMRTISQTTTFNELHVLLKSEESAIEKNSKPEDT
        LP++YN FRTSMRT SQ  TF ELHVLL++EESA+ K SK +D+
Subjt:  LPSDYNAFRTSMRTISQTTTFNELHVLLKSEESAIEKNSKPEDT

A0A5D3CLI6 T4.57.1e-8370.08Show/hide
Query:  TSSAEKDSHSPIFLLSNICNLISLRLDSTNFMLWKFQLQSILKAHKLFGFIDGSIVCPPKTISASSSSSSTSVDPPPTPAPSSVFATVSAPPLINPLYED
        +SSAEKDS SPIFLLSNICNLIS+RLDSTNF+LWKFQL +ILKAHKL+GFIDG+  CPP+T    ++SSSTS                + PP  NP YED
Subjt:  TSSAEKDSHSPIFLLSNICNLISLRLDSTNFMLWKFQLQSILKAHKLFGFIDGSIVCPPKTISASSSSSSTSVDPPPTPAPSSVFATVSAPPLINPLYED

Query:  WIAKDQALMTLINATLSPAALAYVVGCTSSKQAWEVLEKHYSSSSRTNIVNLKSDLQSISKKPGESIDDYIKRIKELKDKLANVSVIIDEEDILIYTLNG
        WIAKDQALMT+INATLSP ALAYVVG TSSKQ W+VL K YSS SR+N+VNLKSDLQ+I KKP ESID YIKRIKE+KDKLANVS  I+EED+LIY LNG
Subjt:  WIAKDQALMTLINATLSPAALAYVVGCTSSKQAWEVLEKHYSSSSRTNIVNLKSDLQSISKKPGESIDDYIKRIKELKDKLANVSVIIDEEDILIYTLNG

Query:  LPSDYNAFRTSMRTISQTTTFNELHVLLKSEESAIEKNSKPEDT
        LP++YN FRTSMRT SQ  TF ELHVLL++EESA+ K SK +D+
Subjt:  LPSDYNAFRTSMRTISQTTTFNELHVLLKSEESAIEKNSKPEDT

A0A6J1D9L6 uncharacterized protein LOC1110188927.6e-7765.2Show/hide
Query:  MTSSA---EKDSHSPIFLLSNICNLISLRLDSTNFMLWKFQLQSILKAHKLFGFIDGSIVCPPKTISASSSSSSTSVDPPPTPAPSSVFATVSAPPLINP
        MTSS+   +KD HSPIFLLSNICNL+S+RLDST+F+LWKFQL +ILKAHKLFGFIDGS+  P + +++SS + S      PT        T ++ P+INP
Subjt:  MTSSA---EKDSHSPIFLLSNICNLISLRLDSTNFMLWKFQLQSILKAHKLFGFIDGSIVCPPKTISASSSSSSTSVDPPPTPAPSSVFATVSAPPLINP

Query:  LYEDWIAKDQALMTLINATLSPAALAYVVGCTSSKQAWEVLEKHYSSSSRTNIVNLKSDLQSISKKPGESIDDYIKRIKELKDKLANVSVIIDEEDILIY
         +EDWIAKDQALMTLINATLS  ALAYVV   +SKQ WEVLEKHYSS+SRTN+VNLKSDLQSI KK  ESID Y+KRIKE+KDK ANVS+ I++E +LIY
Subjt:  LYEDWIAKDQALMTLINATLSPAALAYVVGCTSSKQAWEVLEKHYSSSSRTNIVNLKSDLQSISKKPGESIDDYIKRIKELKDKLANVSVIIDEEDILIY

Query:  TLNGLPSDYNAFRTSMRTISQTTTFNELHVLLKSEESAIEKNSKPEDTLT
         LNGL ++YN   TSMRT +Q+ +F ELHV +KSEESAIEK  K ED +T
Subjt:  TLNGLPSDYNAFRTSMRTISQTTTFNELHVLLKSEESAIEKNSKPEDTLT

SwissProt top hitse value%identityAlignment
P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-941.0e-0628.87Show/hide
Query:  EDWIAKDQALMTLINATLSPAALAYVVGCTSSKQAWEVLEKHYSSSSRTNIVNLKSDLQSISKKPGESIDDYIKRIKELKDKLANVSVIIDEEDILIYTL
        EDW   D+   + I   LS   +  ++   +++  W  LE  Y S + TN + LK  L ++    G +   ++     L  +LAN+ V I+EED  I  L
Subjt:  EDWIAKDQALMTLINATLSPAALAYVVGCTSSKQAWEVLEKHYSSSSRTNIVNLKSDLQSISKKPGESIDDYIKRIKELKDKLANVSVIIDEEDILIYTL

Query:  NGLPSDYNAFRTSMRTISQTTTFNELHVLLKSEESAIEKNSK
        N LPS Y+        ++ T    +  + LK   SA+  N K
Subjt:  NGLPSDYNAFRTSMRTISQTTTFNELHVLLKSEESAIEKNSK

Q94HW2 Retrovirus-related Pol polyprotein from transposon RE16.1e-1526.07Show/hide
Query:  RLDSTNFMLWKFQLQSILKAHKLFGFIDGSIVCPPKTISASSSSSSTSVDPPPTPAPSSVFATVSAPPLINPLYEDWIAKDQALMTLINATLSPAALAYV
        +L STN+++W  Q+ ++   ++L GF+DGS   PP TI                           A P +NP Y  W  +D+ + + +   +S +    V
Subjt:  RLDSTNFMLWKFQLQSILKAHKLFGFIDGSIVCPPKTISASSSSSSTSVDPPPTPAPSSVFATVSAPPLINPLYEDWIAKDQALMTLINATLSPAALAYV

Query:  VGCTSSKQAWEVLEKHYSSSSRTNIVNLKSDLQSISKKPGESIDDYIKRIKELKDKLANVSVIIDEEDILIYTLNGLPSDYNAFRTSMRTISQTTTFNEL
           T++ Q WE L K Y++ S  ++  L++ L+  +K   ++IDDY++ +    D+LA +   +D ++ +   L  LP +Y      +       T  E+
Subjt:  VGCTSSKQAWEVLEKHYSSSSRTNIVNLKSDLQSISKKPGESIDDYIKRIKELKDKLANVSVIIDEEDILIYTLNGLPSDYNAFRTSMRTISQTTTFNEL

Query:  HVLLKSEESAI
        H  L + ES I
Subjt:  HVLLKSEESAI

Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE21.0e-0924.17Show/hide
Query:  RLDSTNFMLWKFQLQSILKAHKLFGFIDGSIVCPPKTISASSSSSSTSVDPPPTPAPSSVFATVSAPPLINPLYEDWIAKDQALMTLINATLSPAALAYV
        +L STN+++W  Q+ ++   ++L GF+DGS   PP TI                           A P +NP Y  W  +D+ + + I   +S +    V
Subjt:  RLDSTNFMLWKFQLQSILKAHKLFGFIDGSIVCPPKTISASSSSSSTSVDPPPTPAPSSVFATVSAPPLINPLYEDWIAKDQALMTLINATLSPAALAYV

Query:  VGCTSSKQAWEVLEKHYSSSSRTNIVNLKSDLQSISKKPGESIDDYIKRIKELKDKLANVSVIIDEEDILIYTLNGLPSDYNAFRTSMRTISQTTTFNEL
           T++ Q WE L K Y++ S  ++  L+                +I R     D+LA +   +D ++ +   L  LP DY      +       +  E+
Subjt:  VGCTSSKQAWEVLEKHYSSSSRTNIVNLKSDLQSISKKPGESIDDYIKRIKELKDKLANVSVIIDEEDILIYTLNGLPSDYNAFRTSMRTISQTTTFNEL

Query:  HVLLKSEESAI
        H  L + ES +
Subjt:  HVLLKSEESAI

Arabidopsis top hitse value%identityAlignment
AT1G21280.1 CONTAINS InterPro DOMAIN/s: Retrotransposon gag protein (InterPro:IPR005162); Has 707 Blast hits to 705 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 0; Plants - 703; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).1.7e-0421.58Show/hide
Query:  SAEKDSHSPIFLLSNI-----CNLISLRLDSTNFMLWKFQLQSILKAHKLFGFIDGSIVCPPKTISASSSSSSTSVDPPPTPAPSSVFATVSAPPLINPL
        S   D  SP +L  +I      ++  L  D  N++ WK + +S L+  K FGFIDG++                   P P P               +PL
Subjt:  SAEKDSHSPIFLLSNI-----CNLISLRLDSTNFMLWKFQLQSILKAHKLFGFIDGSIVCPPKTISASSSSSSTSVDPPPTPAPSSVFATVSAPPLINPL

Query:  YEDWIAKDQALMTLINATLSPAALAYVVGCTSSKQAWEVLEKHYSSSSRTNIVNLKSDLQSISKKPGESIDDYIKRIKELKDKLANVSVI
        Y+ W   +  +M  +  +++   L  V+   ++ + WE L + +       I  L+  L ++ ++ G+S+++Y  ++ ++  +L+  + I
Subjt:  YEDWIAKDQALMTLINATLSPAALAYVVGCTSSKQAWEVLEKHYSSSSRTNIVNLKSDLQSISKKPGESIDDYIKRIKELKDKLANVSVI

AT1G34070.1 CONTAINS InterPro DOMAIN/s: Retrotransposon gag protein (InterPro:IPR005162)6.3e-0723.13Show/hide
Query:  DWIAKDQALMTLINATLSPAAL-AYVVGCTSSKQAWEVLEKHYSSSSRTNIVNLKSDLQSISKKPGE-SIDDYIKRIKELKDKLANVSVIIDEEDILIYT
        +W  +D  +   +  TL+P       V  ++S+  W  ++  + ++     + L S+L+  +K  G+  + DY +++K+L D L NV V + + ++++Y 
Subjt:  DWIAKDQALMTLINATLSPAAL-AYVVGCTSSKQAWEVLEKHYSSSSRTNIVNLKSDLQSISKKPGE-SIDDYIKRIKELKDKLANVSVIIDEEDILIYT

Query:  LNGLPSDYNAFRTSMRTISQTTTFNELHVLLKSEESAIEKNSKPEDT
        LNGL   ++     ++      +F++   +L+ EE  +++  KP  T
Subjt:  LNGLPSDYNAFRTSMRTISQTTTFNELHVLLKSEESAIEKNSKPEDT


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACATCTTCTGCTGAAAAGGACTCACACTCTCCAATATTCCTCCTCTCCAACATTTGTAACCTAATATCTCTTCGTCTTGATTCTACAAACTTCATGCTATGGAAATT
CCAGCTGCAATCGATTTTGAAGGCGCATAAACTCTTTGGGTTTATTGATGGCTCCATCGTCTGCCCACCGAAAACAATCTCTGCGTCATCCTCTTCATCTTCAACCTCAG
TCGACCCACCGCCCACCCCTGCTCCCTCTTCGGTTTTTGCTACCGTTTCAGCCCCGCCTCTAATCAATCCCCTCTATGAGGATTGGATTGCTAAGGATCAAGCTCTCATG
ACTCTGATTAATGCCACGCTTTCTCCAGCAGCGTTGGCTTATGTCGTTGGTTGCACCTCGTCGAAGCAGGCTTGGGAAGTTCTCGAGAAGCATTATTCTTCCAGCTCGAG
GACAAATATTGTAAACCTGAAGTCGGATCTTCAGTCGATCTCCAAAAAGCCAGGTGAGTCCATTGATGACTATATTAAGCGTATTAAGGAACTGAAAGACAAGTTGGCTA
ATGTGTCTGTCATTATTGATGAGGAGGATATCTTAATCTATACCTTGAATGGTTTGCCATCCGATTATAATGCCTTTCGAACATCCATGAGGACCATATCTCAAACCACA
ACATTCAATGAACTTCATGTTTTGCTGAAATCTGAAGAATCTGCCATTGAGAAGAATTCCAAACCAGAGGATACCTTGACTCTGTTGGGTTTTATGCCCTAA
mRNA sequenceShow/hide mRNA sequence
ATGACATCTTCTGCTGAAAAGGACTCACACTCTCCAATATTCCTCCTCTCCAACATTTGTAACCTAATATCTCTTCGTCTTGATTCTACAAACTTCATGCTATGGAAATT
CCAGCTGCAATCGATTTTGAAGGCGCATAAACTCTTTGGGTTTATTGATGGCTCCATCGTCTGCCCACCGAAAACAATCTCTGCGTCATCCTCTTCATCTTCAACCTCAG
TCGACCCACCGCCCACCCCTGCTCCCTCTTCGGTTTTTGCTACCGTTTCAGCCCCGCCTCTAATCAATCCCCTCTATGAGGATTGGATTGCTAAGGATCAAGCTCTCATG
ACTCTGATTAATGCCACGCTTTCTCCAGCAGCGTTGGCTTATGTCGTTGGTTGCACCTCGTCGAAGCAGGCTTGGGAAGTTCTCGAGAAGCATTATTCTTCCAGCTCGAG
GACAAATATTGTAAACCTGAAGTCGGATCTTCAGTCGATCTCCAAAAAGCCAGGTGAGTCCATTGATGACTATATTAAGCGTATTAAGGAACTGAAAGACAAGTTGGCTA
ATGTGTCTGTCATTATTGATGAGGAGGATATCTTAATCTATACCTTGAATGGTTTGCCATCCGATTATAATGCCTTTCGAACATCCATGAGGACCATATCTCAAACCACA
ACATTCAATGAACTTCATGTTTTGCTGAAATCTGAAGAATCTGCCATTGAGAAGAATTCCAAACCAGAGGATACCTTGACTCTGTTGGGTTTTATGCCCTAA
Protein sequenceShow/hide protein sequence
MTSSAEKDSHSPIFLLSNICNLISLRLDSTNFMLWKFQLQSILKAHKLFGFIDGSIVCPPKTISASSSSSSTSVDPPPTPAPSSVFATVSAPPLINPLYEDWIAKDQALM
TLINATLSPAALAYVVGCTSSKQAWEVLEKHYSSSSRTNIVNLKSDLQSISKKPGESIDDYIKRIKELKDKLANVSVIIDEEDILIYTLNGLPSDYNAFRTSMRTISQTT
TFNELHVLLKSEESAIEKNSKPEDTLTLLGFMP