; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0017893 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0017893
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionCCHC-type domain-containing protein
Genome locationchr5:10981413..10982276
RNA-Seq ExpressionLag0017893
SyntenyLag0017893
Gene Ontology termsNA
InterPro domainsIPR036691 - Endonuclease/exonuclease/phosphatase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF4351405.1 hypothetical protein F8388_001025, partial [Cannabis sativa]7.5e-5139.3Show/hide
Query:  GTLRSFRNVCDALGHLSPHVLFLCETKCNVALMEKLKRRLNYYGCFPISSRGASGGLCLLWKEDVMVSIRSYSQFHIDSSISWQGC-VWRFSGLYGQPES
        G L + R V   +   SP ++FL ETK      E ++R++++   F +   G SGGL LLW +D  VS++S+S  HID+ +   G  VWRF+G YG P++
Subjt:  GTLRSFRNVCDALGHLSPHVLFLCETKCNVALMEKLKRRLNYYGCFPISSRGASGGLCLLWKEDVMVSIRSYSQFHIDSSISWQGC-VWRFSGLYGQPES

Query:  HLRVHTWNLLRRLHNYDDSAWVVGGDLNEILWSSEKNGGVDRDVGLMDDFRAALDDCNLQDLGYSGDCFTWCNRRLPGERIFERLDRYVGNAAFQFLFPN
          R+ +W LL RL    D  W+ GGD NEIL  +EK GGVDR +  + DF+ ALD C+L D+G+ G CFTW N+R     + ERLDRY  N  +  LFP+
Subjt:  HLRVHTWNLLRRLHNYDDSAWVVGGDLNEILWSSEKNGGVDRDVGLMDDFRAALDDCNLQDLGYSGDCFTWCNRRLPGERIFERLDRYVGNAAFQFLFPN

Query:  FQVHNLGWECSDHLPISLQLRPNLVAHSGPKRLRAFKFNANWVRYEECRSLV-----SSIVENSGGDSLQHDLDRCSAALRTSNR
         +V N  +  SDH PI+  L  N+V +    + ++F+F  +W++  ECR +V     S  V     DS+     RC+  L   N+
Subjt:  FQVHNLGWECSDHLPISLQLRPNLVAHSGPKRLRAFKFNANWVRYEECRSLV-----SSIVENSGGDSLQHDLDRCSAALRTSNR

KAF5443558.1 hypothetical protein F2P56_036105, partial [Juglans regia]1.5e-5140.96Show/hide
Query:  MGTLRSFRNVCDALGHLSPHVLFLCETKCNVALMEKLKRRLNYYGCFPISSRGASGGLCLLWKEDVMVSIRSYSQFHIDSSI-SWQGCVWRFSGLYGQPE
        +G  +  R + D + +  P ++FL ETK     ME  K RL+   CF +   G SGGL LLWK D+ V ++S+S  HID+ I    G  WRF+G+YG PE
Subjt:  MGTLRSFRNVCDALGHLSPHVLFLCETKCNVALMEKLKRRLNYYGCFPISSRGASGGLCLLWKEDVMVSIRSYSQFHIDSSI-SWQGCVWRFSGLYGQPE

Query:  SHLRVHTWNLLRRLHNYDDSAWVVGGDLNEILWSSEKNGGVDRDVGLMDDFRAALDDCNLQDLGYSGDCFTWCNRRLPGERIFERLDRYVGNAAFQFLFP
           R  TWNLLRRL++  D  W+VGGD NE+L  +EK GG  R    M+ FR  + DC+L+DLG+ G  +TWCN R     I ERLDR++GN  F  LFP
Subjt:  SHLRVHTWNLLRRLHNYDDSAWVVGGDLNEILWSSEKNGGVDRDVGLMDDFRAALDDCNLQDLGYSGDCFTWCNRRLPGERIFERLDRYVGNAAFQFLFP

Query:  NFQVHNLGWECSDHLPISLQLRPNLVAHSGPKRLRAFKFNANWVRYEECRSLVSSIVENSGGDSLQHDLDR
         F V +     SDHLP+          +  PK    F+F A WV  E+C  +++ +    G      D+ R
Subjt:  NFQVHNLGWECSDHLPISLQLRPNLVAHSGPKRLRAFKFNANWVRYEECRSLVSSIVENSGGDSLQHDLDR

KAF5464386.1 hypothetical protein F2P56_014464 [Juglans regia]7.5e-5142.35Show/hide
Query:  MGTLRSFRNVCDALGHLSPHVLFLCETKCNVALMEKLKRRLNYYGCFPISSRGASGGLCLLWKEDVMVSIRSYSQFHIDSSISWQGCV---WRFSGLYGQ
        +G  R  R + D +    P VLFL ETK +   MEKLK RL Y  C  +SS G SGG+ LLWK DV + I++YS+ HI +++         W F+G+YGQ
Subjt:  MGTLRSFRNVCDALGHLSPHVLFLCETKCNVALMEKLKRRLNYYGCFPISSRGASGGLCLLWKEDVMVSIRSYSQFHIDSSISWQGCV---WRFSGLYGQ

Query:  PESHLRVHTWNLLRRLHNYDDSAWVVGGDLNEILWSSEKNGGVDRDVGLMDDFRAALDDCNLQDLGYSGDCFTWCNRRLPGERIFERLDRYVGNAAFQFL
        P+   R  TWNLLR L    D  W++ GD NE+L  +EK GG  R    +  F   +DDC L DLG+ G+ FTWCN+R P + I ERLDR + N  ++ L
Subjt:  PESHLRVHTWNLLRRLHNYDDSAWVVGGDLNEILWSSEKNGGVDRDVGLMDDFRAALDDCNLQDLGYSGDCFTWCNRRLPGERIFERLDRYVGNAAFQFL

Query:  FPNFQVHNLGWECSDHLPISLQLRPNLVAHSGPKRLRAFKFNANWVRYEECRSLV
        F    V +     SDH+PI LQL+ N +   G K    F+F A WV  + C++++
Subjt:  FPNFQVHNLGWECSDHLPISLQLRPNLVAHSGPKRLRAFKFNANWVRYEECRSLV

XP_042950313.1 uncharacterized protein LOC122282426 [Carya illinoinensis]1.5e-5440.97Show/hide
Query:  MGTLRSFRNVCDALGHLSPHVLFLCETKCNVALMEKLKRRLNYYGCFPISSRGASGGLCLLWKEDVMVSIRSYSQFHIDSSISWQG-CVWRFSGLYGQPE
        +G     R + D +    P +LFL ETK +   M+ LK +L +  CF + S G SGGL LLW  D+ V +RS+SQ+HID  I      VWRF+GLYG P+
Subjt:  MGTLRSFRNVCDALGHLSPHVLFLCETKCNVALMEKLKRRLNYYGCFPISSRGASGGLCLLWKEDVMVSIRSYSQFHIDSSISWQG-CVWRFSGLYGQPE

Query:  SHLRVHTWNLLRRLHNYDDSAWVVGGDLNEILWSSEKNGGVDRDVGLMDDFRAALDDCNLQDLGYSGDCFTWCNRRLPGERIFERLDRYVGNAAFQFLFP
        +  R  TWNL+R L + +   W+VGGDLNE+L   EK GG DR V  ++ FR  L +C L+DLGY G  FTW N R     IFE LDR+VGN     LFP
Subjt:  SHLRVHTWNLLRRLHNYDDSAWVVGGDLNEILWSSEKNGGVDRDVGLMDDFRAALDDCNLQDLGYSGDCFTWCNRRLPGERIFERLDRYVGNAAFQFLFP

Query:  NFQVHNLGWECSDHLPI---SLQLRPNLVAHSGPKRLRAFKFNANWVRYEECRSLVSSIVENSGGDSLQHDL----DRCSAALRTSNR
        +  V +     SDH+PI   S   +P       P+R + F   A WV  E+C  ++  +    GG+    DL      C   L+  NR
Subjt:  NFQVHNLGWECSDHLPI---SLQLRPNLVAHSGPKRLRAFKFNANWVRYEECRSLVSSIVENSGGDSLQHDL----DRCSAALRTSNR

XP_042980077.1 uncharacterized protein LOC122310261 [Carya illinoinensis]7.8e-5641.32Show/hide
Query:  MGTLRSFRNVCDALGHLSPHVLFLCETKCNVALMEKLKRRLNYYGCFPISSRGASGGLCLLWKEDVMVSIRSYSQFHIDSSISWQG-CVWRFSGLYGQPE
        +G     R + D +    P +LFL ETK     M+ LKR+L +  CF + S G SGGL LLW  D+ V +RS+S++HID  I      VWRF+GLYG P+
Subjt:  MGTLRSFRNVCDALGHLSPHVLFLCETKCNVALMEKLKRRLNYYGCFPISSRGASGGLCLLWKEDVMVSIRSYSQFHIDSSISWQG-CVWRFSGLYGQPE

Query:  SHLRVHTWNLLRRLHNYDDSAWVVGGDLNEILWSSEKNGGVDRDVGLMDDFRAALDDCNLQDLGYSGDCFTWCNRRLPGERIFERLDRYVGNAAFQFLFP
        +  R  TWNL+R L + +   W+VGGDLNE+L   EK GG DR V  ++ FR  L +C L+DLGY G  FTW N R     IFERLDR+VGN     LFP
Subjt:  SHLRVHTWNLLRRLHNYDDSAWVVGGDLNEILWSSEKNGGVDRDVGLMDDFRAALDDCNLQDLGYSGDCFTWCNRRLPGERIFERLDRYVGNAAFQFLFP

Query:  NFQVHNLGWECSDHLPI---SLQLRPNLVAHSGPKRLRAFKFNANWVRYEECRSLVSSIVENSGG----DSLQHDLDRCSAALRTSNR
        +  V +     SDH+PI   S   +P       P+R + F+F A WV  E+C  ++  +    GG    + L + +  C   L+  NR
Subjt:  NFQVHNLGWECSDHLPI---SLQLRPNLVAHSGPKRLRAFKFNANWVRYEECRSLVSSIVENSGG----DSLQHDLDRCSAALRTSNR

TrEMBL top hitse value%identityAlignment
A0A2N9EEH0 Uncharacterized protein1.8e-5035.34Show/hide
Query:  MGTLRSFRNVCDALGHLSPHVLFLCETKCNVALMEKLKRRLNYYGCFPISSRGASGGLCLLWKEDVMVSIRSYSQFHIDSS-ISWQGCVWRFSGLYGQPE
        +G  ++ R + D + H +P V+FL ET+  +  +E L+ +L  +G   +   G  GGL LLWK++V  +I S+S  HID++ ++W    W F+G YG PE
Subjt:  MGTLRSFRNVCDALGHLSPHVLFLCETKCNVALMEKLKRRLNYYGCFPISSRGASGGLCLLWKEDVMVSIRSYSQFHIDSS-ISWQGCVWRFSGLYGQPE

Query:  SHLRVHTWNLLRRLHNYDDSAWVVGGDLNEILWSSEKNGGVDRDVGLMDDFRAALDDCNLQDLGYSGDCFTWCNRRLPGERIFERLDRYVGNAAFQFLFP
        +  R  +W LLRRL   DD  W+V GD NEIL   EK G ++R+   M+DFR  L DC L+D+G+ G+ +TW N R   + ++ERLDR V +A +  LFP
Subjt:  SHLRVHTWNLLRRLHNYDDSAWVVGGDLNEILWSSEKNGGVDRDVGLMDDFRAALDDCNLQDLGYSGDCFTWCNRRLPGERIFERLDRYVGNAAFQFLFP

Query:  NFQVHNLGWECSDHLPISLQLRPNLVAHSGPKRLRAFKFNANWVRYEECRSLVSSIVENSGGDSLQHDLDRCSAALRTSNRGW
        N ++  + +  SDH  + ++L P  +      + + F+F A W++ E C  ++++  + S    L + + +   A R +   W
Subjt:  NFQVHNLGWECSDHLPISLQLRPNLVAHSGPKRLRAFKFNANWVRYEECRSLVSSIVENSGGDSLQHDLDRCSAALRTSNRGW

A0A2N9I946 Uncharacterized protein1.1e-5040.98Show/hide
Query:  TLRSFRNVCDALG--------HL-----SPHVLFLCETKCNVALMEKLKRRLNYYGCFPISSRGASGGLCLLWKEDVMVSIRSYSQFHIDSS-ISWQGCV
        T+++F   C  LG        H+      P V+FL ET+  V  +E L+ RL  +GCF ++  G  GGL L+WK  V V I+S+S  HID+  +   G  
Subjt:  TLRSFRNVCDALG--------HL-----SPHVLFLCETKCNVALMEKLKRRLNYYGCFPISSRGASGGLCLLWKEDVMVSIRSYSQFHIDSS-ISWQGCV

Query:  WRFSGLYGQPESHLRVHTWNLLRRLHNYDDSAWVVGGDLNEILWSSEKNGGVDRDVGLMDDFRAALDDCNLQDLGYSGDCFTWCNRRLPGERIFERLDRY
        WR +G YG PE  LR  +W LLR+L++  +  W+V GD NE+L   E+ G +DR++  M  FR AL DC+LQDLGY+G  F+W NRR  G  +  RLDR 
Subjt:  WRFSGLYGQPESHLRVHTWNLLRRLHNYDDSAWVVGGDLNEILWSSEKNGGVDRDVGLMDDFRAALDDCNLQDLGYSGDCFTWCNRRLPGERIFERLDRY

Query:  VGNAAFQFLFPNFQVHNLGWECSDHLPISLQLRPNLVAHSGPKRLRAFKFNANWVRYEECRSLVSS
        V N  +  LFP++QVH++ +  SDH+ + + L P  V  SG  R + F+F   WVR   C   + S
Subjt:  VGNAAFQFLFPNFQVHNLGWECSDHLPISLQLRPNLVAHSGPKRLRAFKFNANWVRYEECRSLVSS

A0A7J6DZ24 CCHC-type domain-containing protein3.7e-5139.3Show/hide
Query:  GTLRSFRNVCDALGHLSPHVLFLCETKCNVALMEKLKRRLNYYGCFPISSRGASGGLCLLWKEDVMVSIRSYSQFHIDSSISWQGC-VWRFSGLYGQPES
        G L + R V   +   SP ++FL ETK      E ++R++++   F +   G SGGL LLW +D  VS++S+S  HID+ +   G  VWRF+G YG P++
Subjt:  GTLRSFRNVCDALGHLSPHVLFLCETKCNVALMEKLKRRLNYYGCFPISSRGASGGLCLLWKEDVMVSIRSYSQFHIDSSISWQGC-VWRFSGLYGQPES

Query:  HLRVHTWNLLRRLHNYDDSAWVVGGDLNEILWSSEKNGGVDRDVGLMDDFRAALDDCNLQDLGYSGDCFTWCNRRLPGERIFERLDRYVGNAAFQFLFPN
          R+ +W LL RL    D  W+ GGD NEIL  +EK GGVDR +  + DF+ ALD C+L D+G+ G CFTW N+R     + ERLDRY  N  +  LFP+
Subjt:  HLRVHTWNLLRRLHNYDDSAWVVGGDLNEILWSSEKNGGVDRDVGLMDDFRAALDDCNLQDLGYSGDCFTWCNRRLPGERIFERLDRYVGNAAFQFLFPN

Query:  FQVHNLGWECSDHLPISLQLRPNLVAHSGPKRLRAFKFNANWVRYEECRSLV-----SSIVENSGGDSLQHDLDRCSAALRTSNR
         +V N  +  SDH PI+  L  N+V +    + ++F+F  +W++  ECR +V     S  V     DS+     RC+  L   N+
Subjt:  FQVHNLGWECSDHLPISLQLRPNLVAHSGPKRLRAFKFNANWVRYEECRSLV-----SSIVENSGGDSLQHDLDRCSAALRTSNR

A0A7J6FPV7 CCHC-type domain-containing protein1.8e-5039.78Show/hide
Query:  SPHVLFLCETKCNVALMEKLKRRLNYYGCFPISSRGASGGLCLLWKEDVMVSIRSYSQFHIDSSISWQGC-VWRFSGLYGQPESHLRVHTWNLLRRLHNY
        SP ++FL ETK      E ++R++++   F +   G SGGL LLW +D  VS++S+S  HID+ +   G  VWRF+G YG P++  R+++W LL RL   
Subjt:  SPHVLFLCETKCNVALMEKLKRRLNYYGCFPISSRGASGGLCLLWKEDVMVSIRSYSQFHIDSSISWQGC-VWRFSGLYGQPESHLRVHTWNLLRRLHNY

Query:  DDSAWVVGGDLNEILWSSEKNGGVDRDVGLMDDFRAALDDCNLQDLGYSGDCFTWCNRRLPGERIFERLDRYVGNAAFQFLFPNFQVHNLGWECSDHLPI
         D  W+ GGD NE+L  +EK GGVDR +  + DF+ ALD C+L D+G+ G CFTW N+R     + ERLDRY  N  +  LFP+ +V N  +  SDH PI
Subjt:  DDSAWVVGGDLNEILWSSEKNGGVDRDVGLMDDFRAALDDCNLQDLGYSGDCFTWCNRRLPGERIFERLDRYVGNAAFQFLFPNFQVHNLGWECSDHLPI

Query:  SLQLRPNLVAHSGPKRLRAFKFNANWVRYEECRSLV-----SSIVENSGGDSLQHDLDRCSAALRTSNR
        +  L  N+V      + ++F+F  +W++  ECR +V     S  V     DS+     RC+  L   N+
Subjt:  SLQLRPNLVAHSGPKRLRAFKFNANWVRYEECRSLV-----SSIVENSGGDSLQHDLDRCSAALRTSNR

A0A803PRV5 Uncharacterized protein2.8e-5144.26Show/hide
Query:  LFLCETKCNVALMEKLKRRLNYYGCFPISSRGASGGLCLLWKEDVMVSIRSYSQFHIDSSISWQ-GCVWRFSGLYGQPESHLRVHTWNLLRRLHNYDDSA
        +F+ E+K N    E L+ +L ++GCF + +RG SGGL LLW  D+   + SYSQFHIDS I  + G  WRF+G YG P+   R H+W LL+RL+      
Subjt:  LFLCETKCNVALMEKLKRRLNYYGCFPISSRGASGGLCLLWKEDVMVSIRSYSQFHIDSSISWQ-GCVWRFSGLYGQPESHLRVHTWNLLRRLHNYDDSA

Query:  WVVGGDLNEILWSSEKNGGVDRDVGLMDDFRAALDDCNLQDLGYSGDCFTWCNRRLPGERIFERLDRYVGNAAFQFLFPNFQVHNLGWECSDHLPISLQL
        WVVGGD NEIL   EK GG+ +   L+++FR ALD C L+D+GY G+ +TWCN R   + IFERLDR  GN+ +  +FP+ +V +L    SDH P+ L  
Subjt:  WVVGGDLNEILWSSEKNGGVDRDVGLMDDFRAALDDCNLQDLGYSGDCFTWCNRRLPGERIFERLDRYVGNAAFQFLFPNFQVHNLGWECSDHLPISLQL

Query:  R-PNLVAHSGPKRLRAFKFNANWVRYEECRSLVSS
          P+L      +    F F + W   EEC  +V S
Subjt:  R-PNLVAHSGPKRLRAFKFNANWVRYEECRSLVSS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGACCCTGAGATCATTCCGTAATGTATGTGACGCGTTAGGTCACCTTAGTCCTCATGTTCTTTTTCTTTGTGAAACGAAATGTAATGTTGCTTTAATGGAAAAGTT
GAAACGTCGTTTGAATTATTATGGTTGTTTCCCTATTAGTAGTCGTGGCGCTAGTGGTGGATTGTGTTTACTGTGGAAAGAGGATGTTATGGTTTCCATACGCTCTTATT
CTCAATTTCACATTGATTCGTCAATTTCGTGGCAAGGCTGTGTATGGCGTTTTTCTGGTTTGTATGGCCAGCCAGAGAGTCATCTTCGAGTTCATACGTGGAATTTGTTA
CGTCGGTTGCATAATTATGATGATTCTGCATGGGTTGTCGGCGGTGATTTGAATGAGATCTTGTGGTCTTCGGAGAAAAATGGTGGTGTTGATCGGGATGTTGGACTTAT
GGATGATTTTCGGGCTGCTTTGGATGATTGTAACTTGCAGGATCTTGGGTATTCCGGTGATTGTTTTACTTGGTGCAACCGTCGGTTGCCTGGCGAGCGTATTTTTGAGA
GATTGGATCGGTATGTGGGTAATGCGGCCTTCCAGTTCTTGTTTCCGAATTTTCAGGTCCATAACCTCGGTTGGGAGTGCTCTGATCATCTGCCCATTTCCCTACAGCTT
AGGCCCAATTTGGTGGCTCATTCGGGCCCCAAGCGCCTGCGTGCCTTTAAATTTAATGCTAACTGGGTCCGGTATGAGGAGTGTCGTTCACTTGTGAGTTCAATTGTCGA
GAATAGTGGAGGTGATTCTCTGCAACATGATCTTGATCGTTGCTCTGCGGCTCTTCGGACTTCCAACAGGGGTTGGGATGTGGCAAAGCTCTAG
mRNA sequenceShow/hide mRNA sequence
ATGGGGACCCTGAGATCATTCCGTAATGTATGTGACGCGTTAGGTCACCTTAGTCCTCATGTTCTTTTTCTTTGTGAAACGAAATGTAATGTTGCTTTAATGGAAAAGTT
GAAACGTCGTTTGAATTATTATGGTTGTTTCCCTATTAGTAGTCGTGGCGCTAGTGGTGGATTGTGTTTACTGTGGAAAGAGGATGTTATGGTTTCCATACGCTCTTATT
CTCAATTTCACATTGATTCGTCAATTTCGTGGCAAGGCTGTGTATGGCGTTTTTCTGGTTTGTATGGCCAGCCAGAGAGTCATCTTCGAGTTCATACGTGGAATTTGTTA
CGTCGGTTGCATAATTATGATGATTCTGCATGGGTTGTCGGCGGTGATTTGAATGAGATCTTGTGGTCTTCGGAGAAAAATGGTGGTGTTGATCGGGATGTTGGACTTAT
GGATGATTTTCGGGCTGCTTTGGATGATTGTAACTTGCAGGATCTTGGGTATTCCGGTGATTGTTTTACTTGGTGCAACCGTCGGTTGCCTGGCGAGCGTATTTTTGAGA
GATTGGATCGGTATGTGGGTAATGCGGCCTTCCAGTTCTTGTTTCCGAATTTTCAGGTCCATAACCTCGGTTGGGAGTGCTCTGATCATCTGCCCATTTCCCTACAGCTT
AGGCCCAATTTGGTGGCTCATTCGGGCCCCAAGCGCCTGCGTGCCTTTAAATTTAATGCTAACTGGGTCCGGTATGAGGAGTGTCGTTCACTTGTGAGTTCAATTGTCGA
GAATAGTGGAGGTGATTCTCTGCAACATGATCTTGATCGTTGCTCTGCGGCTCTTCGGACTTCCAACAGGGGTTGGGATGTGGCAAAGCTCTAG
Protein sequenceShow/hide protein sequence
MGTLRSFRNVCDALGHLSPHVLFLCETKCNVALMEKLKRRLNYYGCFPISSRGASGGLCLLWKEDVMVSIRSYSQFHIDSSISWQGCVWRFSGLYGQPESHLRVHTWNLL
RRLHNYDDSAWVVGGDLNEILWSSEKNGGVDRDVGLMDDFRAALDDCNLQDLGYSGDCFTWCNRRLPGERIFERLDRYVGNAAFQFLFPNFQVHNLGWECSDHLPISLQL
RPNLVAHSGPKRLRAFKFNANWVRYEECRSLVSSIVENSGGDSLQHDLDRCSAALRTSNRGWDVAKL