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Lag0017895 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0017895
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionBeta-amylase
Genome locationchr5:10991472..10992065
RNA-Seq ExpressionLag0017895
SyntenyLag0017895
Gene Ontology termsGO:0005975 - carbohydrate metabolic process (biological process)
GO:0043170 - macromolecule metabolic process (biological process)
GO:0004553 - hydrolase activity, hydrolyzing O-glycosyl compounds (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAG1849748.1 unnamed protein product, partial [Musa acuminata subsp. malaccensis]5.1e-1431.11Show/hide
Query:  SHNLPISSFSNNGQSRDLTQQARRRAINQTNQEKEKDSTIQTHDQIQPKSPSGIKAPLQKIRENQEHIKNNGLHNIEPNIATEIR-VSDNDEVKSQEHQK
        SH+ P+    +  Q R+L Q+A R A+++  +++++D  ++  +++QP    G++ PL++IRE +E ++++GLH +E +   E   ++++ EV+ +E + 
Subjt:  SHNLPISSFSNNGQSRDLTQQARRRAINQTNQEKEKDSTIQTHDQIQPKSPSGIKAPLQKIRENQEHIKNNGLHNIEPNIATEIR-VSDNDEVKSQEHQK

Query:  SIQWKALENSNGGNQGLNENLKGSVLSDNVLAVLDAVEEGVEVADGGDEAVGAVGGVVAVVAGGSDGEEWSSWSSEVDLG
          +    E  +G  +GL + L+G  L  +   V+DAVEEGVE+A GG +AV  VGG   +   G++  E ++ +   D G
Subjt:  SIQWKALENSNGGNQGLNENLKGSVLSDNVLAVLDAVEEGVEVADGGDEAVGAVGGVVAVVAGGSDGEEWSSWSSEVDLG

GER32845.1 ribonuclease 3 [Striga asiatica]5.8e-3459.73Show/hide
Query:  KNSHNLPISSFSNNGQSRDLTQQARRRAINQTNQEKEKDSTIQTHDQIQPKSPSGIKAPLQKIRENQEHIKNNGLHNIEPNIATEIRVSDNDEVKSQEHQ
        + + +LPISS S+ GQSR+L++Q R RAINQ NQE++K STI+ H QIQ     GIK+PLQKIR+NQEHIK+  LH +EP+I  E+ +  + EVKS+E Q
Subjt:  KNSHNLPISSFSNNGQSRDLTQQARRRAINQTNQEKEKDSTIQTHDQIQPKSPSGIKAPLQKIRENQEHIKNNGLHNIEPNIATEIRVSDNDEVKSQEHQ

Query:  KSIQWKALENSNGGNQGLNENLKGSVLSDNVLAVLDAVEEGVEVADGGD
        K+IQ KALE+ NGG Q LNE L+   LSDNV  VL AVEEGVEV+DG D
Subjt:  KSIQWKALENSNGGNQGLNENLKGSVLSDNVLAVLDAVEEGVEVADGGD

KAF5479066.1 hypothetical protein F2P56_005571, partial [Juglans regia]2.3e-3057.04Show/hide
Query:  SHNLPISSFSNNGQSRDLTQQARRRAINQTNQEKEKDSTIQTHDQIQPKSPSGIKAPLQKIRENQEHIKNNGLHNIEPNIATEIRVSDNDEVKSQEHQKS
        S NLPISSF NNGQS  LTQQA RR I+QT Q+++K S ++ H Q+Q ++ S I+APLQKIR+NQ+HIK+  LH IEPN+ T++ V +N +VK QEHQK 
Subjt:  SHNLPISSFSNNGQSRDLTQQARRRAINQTNQEKEKDSTIQTHDQIQPKSPSGIKAPLQKIRENQEHIKNNGLHNIEPNIATEIRVSDNDEVKSQEHQKS

Query:  IQWKALENSNGGNQGLNENLKGSVLSDNVLAVLDAVEEGVEV
        I+ KAL++     Q L+++L GS LSDNV +VL A++EGVEV
Subjt:  IQWKALENSNGGNQGLNENLKGSVLSDNVLAVLDAVEEGVEV

KAG2310665.1 hypothetical protein Bca52824_022222 [Brassica carinata]4.6e-3153.69Show/hide
Query:  FLKNSHNLPISSFSNNGQSRDLTQQARRRAINQTNQEKEKDSTIQTHDQIQPKSPSGIKAPLQKIRENQEHIKNNGLHNIEPNIATEIRVSDNDEVKSQE
        FL  S +LPISS SNNGQ R  T+QA R  I+QT++++E+ S +QTH  IQ K  SGI+APLQ+IR++Q+H+++NGLH +EPN+  EIRV  +DEV+S E
Subjt:  FLKNSHNLPISSFSNNGQSRDLTQQARRRAINQTNQEKEKDSTIQTHDQIQPKSPSGIKAPLQKIRENQEHIKNNGLHNIEPNIATEIRVSDNDEVKSQE

Query:  HQKSIQWKALENSNGGNQGLNENLKGSVLSDNVLAVLDAVEEGVEVADG
         +K+I+ +ALE  +GG Q L+ENL+  VL D+   VL+ +EE VEV DG
Subjt:  HQKSIQWKALENSNGGNQGLNENLKGSVLSDNVLAVLDAVEEGVEVADG

VDD21365.1 unnamed protein product [Brassica oleracea]4.6e-3154.55Show/hide
Query:  NLPISSFSNNGQSRDLTQQARRRAINQTNQEKEKDSTIQTHDQIQPKSPSGIKAPLQKIRENQEHIKNNGLHNIEPNIATEIRVSDNDEVKSQEHQKSIQ
        +LPISS SNNGQ R  T+QA R +I+QT++++E+   +QTH  IQ K  SGIKAPL++IRENQ+H+++NGLH +EPN+  E+RVS +DEV+S E +++I+
Subjt:  NLPISSFSNNGQSRDLTQQARRRAINQTNQEKEKDSTIQTHDQIQPKSPSGIKAPLQKIRENQEHIKNNGLHNIEPNIATEIRVSDNDEVKSQEHQKSIQ

Query:  WKALENSNGGNQGLNENLKGSVLSDNVLAVLDAVEEGVEVADG
         +ALE  +GG Q L+ENL+  VL D+  AVL+ +EE VEV DG
Subjt:  WKALENSNGGNQGLNENLKGSVLSDNVLAVLDAVEEGVEVADG

TrEMBL top hitse value%identityAlignment
A0A0D3ALV7 Beta-amylase8.4e-3153.85Show/hide
Query:  NLPISSFSNNGQSRDLTQQARRRAINQTNQEKEKDSTIQTHDQIQPKSPSGIKAPLQKIRENQEHIKNNGLHNIEPNIATEIRVSDNDEVKSQEHQKSIQ
        +LPISS SNNGQ R  T+QA R +I+QT++++E+   +QTH  IQ K  SGIKAPL++IRENQ+H+++NGLH +EPN+  E+RVS +DEV+S E +++I+
Subjt:  NLPISSFSNNGQSRDLTQQARRRAINQTNQEKEKDSTIQTHDQIQPKSPSGIKAPLQKIRENQEHIKNNGLHNIEPNIATEIRVSDNDEVKSQEHQKSIQ

Query:  WKALENSNGGNQGLNENLKGSVLSDNVLAVLDAVEEGVEVADG
         +ALE  +GG Q L+ENL+  VL D+  AVL+ +EE VEV +G
Subjt:  WKALENSNGGNQGLNENLKGSVLSDNVLAVLDAVEEGVEVADG

A0A1J3D4T7 Uncharacterized protein1.1e-2748.7Show/hide
Query:  MKNSKFLKNSHNLPISSFSNNGQSRDLTQQARRRAINQTNQEKEKDSTIQTHDQIQPKSPSGIKAPLQKIRENQEHIKNNGLHNIEPNIATEIRVSDNDE
        M N+K    S +LPISS SNNGQ RDLT+QA R +++Q ++++E+   +QTH  IQ K   GI+APL +IRENQ+H+++N LH +EPN+  E+RV  +DE
Subjt:  MKNSKFLKNSHNLPISSFSNNGQSRDLTQQARRRAINQTNQEKEKDSTIQTHDQIQPKSPSGIKAPLQKIRENQEHIKNNGLHNIEPNIATEIRVSDNDE

Query:  VKSQEHQKSIQWKALENSNGGNQGLNENLKGSVLSDNVLAVLDAVEEGVEVADG
        V+S+E +K+I+ +ALE  +GG Q L+E L+  VL D+   VL+ +EE +EV  G
Subjt:  VKSQEHQKSIQWKALENSNGGNQGLNENLKGSVLSDNVLAVLDAVEEGVEVADG

A0A1J3F9C7 Uncharacterized protein1.1e-2748.7Show/hide
Query:  MKNSKFLKNSHNLPISSFSNNGQSRDLTQQARRRAINQTNQEKEKDSTIQTHDQIQPKSPSGIKAPLQKIRENQEHIKNNGLHNIEPNIATEIRVSDNDE
        M N+K    S +LPISS SNNGQ RDLT+QA R +++Q ++++E+   +QTH  IQ K   GI+APL +IRENQ+H+++N LH +EPN+  E+RV  +DE
Subjt:  MKNSKFLKNSHNLPISSFSNNGQSRDLTQQARRRAINQTNQEKEKDSTIQTHDQIQPKSPSGIKAPLQKIRENQEHIKNNGLHNIEPNIATEIRVSDNDE

Query:  VKSQEHQKSIQWKALENSNGGNQGLNENLKGSVLSDNVLAVLDAVEEGVEVADG
        V+S+E +K+I+ +ALE  +GG Q L+E L+  VL D+   VL+ +EE +EV  G
Subjt:  VKSQEHQKSIQWKALENSNGGNQGLNENLKGSVLSDNVLAVLDAVEEGVEVADG

A0A3P6DG65 Beta-amylase2.2e-3154.55Show/hide
Query:  NLPISSFSNNGQSRDLTQQARRRAINQTNQEKEKDSTIQTHDQIQPKSPSGIKAPLQKIRENQEHIKNNGLHNIEPNIATEIRVSDNDEVKSQEHQKSIQ
        +LPISS SNNGQ R  T+QA R +I+QT++++E+   +QTH  IQ K  SGIKAPL++IRENQ+H+++NGLH +EPN+  E+RVS +DEV+S E +++I+
Subjt:  NLPISSFSNNGQSRDLTQQARRRAINQTNQEKEKDSTIQTHDQIQPKSPSGIKAPLQKIRENQEHIKNNGLHNIEPNIATEIRVSDNDEVKSQEHQKSIQ

Query:  WKALENSNGGNQGLNENLKGSVLSDNVLAVLDAVEEGVEVADG
         +ALE  +GG Q L+ENL+  VL D+  AVL+ +EE VEV DG
Subjt:  WKALENSNGGNQGLNENLKGSVLSDNVLAVLDAVEEGVEVADG

A0A5A7PIZ3 Ribonuclease 32.8e-3459.73Show/hide
Query:  KNSHNLPISSFSNNGQSRDLTQQARRRAINQTNQEKEKDSTIQTHDQIQPKSPSGIKAPLQKIRENQEHIKNNGLHNIEPNIATEIRVSDNDEVKSQEHQ
        + + +LPISS S+ GQSR+L++Q R RAINQ NQE++K STI+ H QIQ     GIK+PLQKIR+NQEHIK+  LH +EP+I  E+ +  + EVKS+E Q
Subjt:  KNSHNLPISSFSNNGQSRDLTQQARRRAINQTNQEKEKDSTIQTHDQIQPKSPSGIKAPLQKIRENQEHIKNNGLHNIEPNIATEIRVSDNDEVKSQEHQ

Query:  KSIQWKALENSNGGNQGLNENLKGSVLSDNVLAVLDAVEEGVEVADGGD
        K+IQ KALE+ NGG Q LNE L+   LSDNV  VL AVEEGVEV+DG D
Subjt:  KSIQWKALENSNGGNQGLNENLKGSVLSDNVLAVLDAVEEGVEVADGGD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGAATAGCAAATTTCTGAAGAATTCACATAACTTGCCTATCAGCAGCTTCAGCAACAATGGGCAATCTAGGGATCTGACCCAACAAGCAAGAAGAAGAGCCATAAA
TCAAACAAACCAAGAGAAAGAGAAAGACAGTACTATCCAAACTCATGACCAAATCCAACCCAAATCCCCCTCTGGGATTAAAGCTCCTCTCCAAAAGATCAGGGAAAATC
AGGAGCACATCAAGAACAATGGCTTGCATAATATTGAACCTAACATAGCGACTGAAATTAGGGTTTCTGACAACGACGAAGTAAAGAGTCAGGAACACCAAAAATCCATT
CAATGGAAAGCTCTTGAAAACTCGAATGGCGGGAACCAAGGGCTGAATGAGAACCTGAAAGGGAGCGTACTGAGTGATAACGTACTTGCCGTACTGGACGCCGTCGAAGA
AGGGGTAGAAGTAGCAGATGGCGGAGATGAGGCGGTCGGGGCCGTCGGCGGAGTTGTTGCTGTTGTCGCCGGAGGATCGGACGGAGAGGAATGGTCGTCGTGGAGTTCTG
AAGTGGATTTGGGATGTGAGGATTCTTCTGCTGCTAGGGTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGAAGAATAGCAAATTTCTGAAGAATTCACATAACTTGCCTATCAGCAGCTTCAGCAACAATGGGCAATCTAGGGATCTGACCCAACAAGCAAGAAGAAGAGCCATAAA
TCAAACAAACCAAGAGAAAGAGAAAGACAGTACTATCCAAACTCATGACCAAATCCAACCCAAATCCCCCTCTGGGATTAAAGCTCCTCTCCAAAAGATCAGGGAAAATC
AGGAGCACATCAAGAACAATGGCTTGCATAATATTGAACCTAACATAGCGACTGAAATTAGGGTTTCTGACAACGACGAAGTAAAGAGTCAGGAACACCAAAAATCCATT
CAATGGAAAGCTCTTGAAAACTCGAATGGCGGGAACCAAGGGCTGAATGAGAACCTGAAAGGGAGCGTACTGAGTGATAACGTACTTGCCGTACTGGACGCCGTCGAAGA
AGGGGTAGAAGTAGCAGATGGCGGAGATGAGGCGGTCGGGGCCGTCGGCGGAGTTGTTGCTGTTGTCGCCGGAGGATCGGACGGAGAGGAATGGTCGTCGTGGAGTTCTG
AAGTGGATTTGGGATGTGAGGATTCTTCTGCTGCTAGGGTTTGA
Protein sequenceShow/hide protein sequence
MKNSKFLKNSHNLPISSFSNNGQSRDLTQQARRRAINQTNQEKEKDSTIQTHDQIQPKSPSGIKAPLQKIRENQEHIKNNGLHNIEPNIATEIRVSDNDEVKSQEHQKSI
QWKALENSNGGNQGLNENLKGSVLSDNVLAVLDAVEEGVEVADGGDEAVGAVGGVVAVVAGGSDGEEWSSWSSEVDLGCEDSSAARV