; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0017901 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0017901
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionTy3-gypsy retrotransposon protein
Genome locationchr5:11099743..11105362
RNA-Seq ExpressionLag0017901
SyntenyLag0017901
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_031735972.1 uncharacterized protein LOC116401693 [Cucumis sativus]3.1e-1447.75Show/hide
Query:  KKAPAKVTTSSDSYTGPVTRSRSQGIEIKEDHTPLAVASRISKLIEESSKDEVAVKDNSLFESVVPTSKQPKDTLNPNVMSVMMADVDQDERIAEIERKV
        KKA +K + +SD+YTGP+TRSRS+GI I+      A+A  I K + ES K  + +K+N L+      S +     +P+VMSVMMADV  +  +AE+ERK+
Subjt:  KKAPAKVTTSSDSYTGPVTRSRSQGIEIKEDHTPLAVASRISKLIEESSKDEVAVKDNSLFESVVPTSKQPKDTLNPNVMSVMMADVDQDERIAEIERKV

Query:  HLLMKAVDERD
        +LLMK VDERD
Subjt:  HLLMKAVDERD

XP_031737053.1 uncharacterized protein LOC116402138 [Cucumis sativus]3.1e-1447.75Show/hide
Query:  KKAPAKVTTSSDSYTGPVTRSRSQGIEIKEDHTPLAVASRISKLIEESSKDEVAVKDNSLFESVVPTSKQPKDTLNPNVMSVMMADVDQDERIAEIERKV
        KKA +K + +SD+YTGP+TRSRS+GI I+      A+A  I K + ES K  + +K+N L+      S +     +P+VMSVMMADV  +  +AE+ERK+
Subjt:  KKAPAKVTTSSDSYTGPVTRSRSQGIEIKEDHTPLAVASRISKLIEESSKDEVAVKDNSLFESVVPTSKQPKDTLNPNVMSVMMADVDQDERIAEIERKV

Query:  HLLMKAVDERD
        +LLMK VDERD
Subjt:  HLLMKAVDERD

XP_031739134.1 uncharacterized protein LOC116402863 [Cucumis sativus]3.1e-1447.75Show/hide
Query:  KKAPAKVTTSSDSYTGPVTRSRSQGIEIKEDHTPLAVASRISKLIEESSKDEVAVKDNSLFESVVPTSKQPKDTLNPNVMSVMMADVDQDERIAEIERKV
        KKA +K + +SD+YTGP+TRSRS+GI I+      A+A  I K + ES K  + +K+N L+      S +     +P+VMSVMMADV  +  +AE+ERK+
Subjt:  KKAPAKVTTSSDSYTGPVTRSRSQGIEIKEDHTPLAVASRISKLIEESSKDEVAVKDNSLFESVVPTSKQPKDTLNPNVMSVMMADVDQDERIAEIERKV

Query:  HLLMKAVDERD
        +LLMK VDERD
Subjt:  HLLMKAVDERD

XP_031742032.1 uncharacterized protein LOC116404025 [Cucumis sativus]3.1e-1447.75Show/hide
Query:  KKAPAKVTTSSDSYTGPVTRSRSQGIEIKEDHTPLAVASRISKLIEESSKDEVAVKDNSLFESVVPTSKQPKDTLNPNVMSVMMADVDQDERIAEIERKV
        KKA +K + +SD+YTGP+TRSRS+GI I+      A+A  I K + ES K  + +K+N L+      S +     +P+VMSVMMADV  +  +AE+ERK+
Subjt:  KKAPAKVTTSSDSYTGPVTRSRSQGIEIKEDHTPLAVASRISKLIEESSKDEVAVKDNSLFESVVPTSKQPKDTLNPNVMSVMMADVDQDERIAEIERKV

Query:  HLLMKAVDERD
        +LLMK VDERD
Subjt:  HLLMKAVDERD

XP_031742199.1 uncharacterized protein LOC105435721 [Cucumis sativus]3.1e-1447.75Show/hide
Query:  KKAPAKVTTSSDSYTGPVTRSRSQGIEIKEDHTPLAVASRISKLIEESSKDEVAVKDNSLFESVVPTSKQPKDTLNPNVMSVMMADVDQDERIAEIERKV
        KKA +K + +SD+YTGP+TRSRS+GI I+      A+A  I K + ES K  + +K+N L+      S +     +P+VMSVMMADV  +  +AE+ERK+
Subjt:  KKAPAKVTTSSDSYTGPVTRSRSQGIEIKEDHTPLAVASRISKLIEESSKDEVAVKDNSLFESVVPTSKQPKDTLNPNVMSVMMADVDQDERIAEIERKV

Query:  HLLMKAVDERD
        +LLMK VDERD
Subjt:  HLLMKAVDERD

TrEMBL top hitse value%identityAlignment
A0A5A7TFN2 Ty3-gypsy retrotransposon protein2.6e-1445.95Show/hide
Query:  KKAPAKVTTSSDSYTGPVTRSRSQGIEIKEDHTPLAVASRISKLIEESSKDEVAVKDNSLFESVVPTSKQPKDTLNPNVMSVMMADVDQDERIAEIERKV
        KKA +  + +SD+YTGP+TRSRS+GI  ++D     VA RI K + ES K  + +K+NSL+++    S + K   +P+V SVMMAD+  +  + E+ERK+
Subjt:  KKAPAKVTTSSDSYTGPVTRSRSQGIEIKEDHTPLAVASRISKLIEESSKDEVAVKDNSLFESVVPTSKQPKDTLNPNVMSVMMADVDQDERIAEIERKV

Query:  HLLMKAVDERD
        + LMKAV+ERD
Subjt:  HLLMKAVDERD

A0A5A7ULS4 Ty3-gypsy retrotransposon protein1.3e-1344.14Show/hide
Query:  KKAPAKVTTSSDSYTGPVTRSRSQGIEIKEDHTPLAVASRISKLIEESSKDEVAVKDNSLFESVVPTSKQPKDTLNPNVMSVMMADVDQDERIAEIERKV
        KKA +  + +SD+YTGP+TR RS+GI +++D     VA  I K + ES K  + +K+N L+++    S + K   +PN+MSVMMAD+  +  + E+ERKV
Subjt:  KKAPAKVTTSSDSYTGPVTRSRSQGIEIKEDHTPLAVASRISKLIEESSKDEVAVKDNSLFESVVPTSKQPKDTLNPNVMSVMMADVDQDERIAEIERKV

Query:  HLLMKAVDERD
        + LMK V+ERD
Subjt:  HLLMKAVDERD

A0A5A7V265 Ty3-gypsy retrotransposon protein2.2e-1345.05Show/hide
Query:  KKAPAKVTTSSDSYTGPVTRSRSQGIEIKEDHTPLAVASRISKLIEESSKDEVAVKDNSLFESVVPTSKQPKDTLNPNVMSVMMADVDQDERIAEIERKV
        KKA +K + ++D+YTGP+TR+ S+GI  ++D     VA  I K + ES K  + +K+NSL+E+    S + K   +P+VMSVMMAD+     + E+ERKV
Subjt:  KKAPAKVTTSSDSYTGPVTRSRSQGIEIKEDHTPLAVASRISKLIEESSKDEVAVKDNSLFESVVPTSKQPKDTLNPNVMSVMMADVDQDERIAEIERKV

Query:  HLLMKAVDERD
        ++LMK V+ERD
Subjt:  HLLMKAVDERD

A0A5A7VFQ8 Ty3-gypsy retrotransposon protein3.7e-1344.14Show/hide
Query:  KKAPAKVTTSSDSYTGPVTRSRSQGIEIKEDHTPLAVASRISKLIEESSKDEVAVKDNSLFESVVPTSKQPKDTLNPNVMSVMMADVDQDERIAEIERKV
        KKA +K + +SD+Y GP+TRSRS+GI  ++D     VA  I K + ES K  + +K+N L+++   TS + K    P+VMSVMMAD+  +  + ++ERKV
Subjt:  KKAPAKVTTSSDSYTGPVTRSRSQGIEIKEDHTPLAVASRISKLIEESSKDEVAVKDNSLFESVVPTSKQPKDTLNPNVMSVMMADVDQDERIAEIERKV

Query:  HLLMKAVDERD
        + LMK ++ERD
Subjt:  HLLMKAVDERD

A0A5D3BY54 Ty3-gypsy retrotransposon protein5.8e-1445.05Show/hide
Query:  KKAPAKVTTSSDSYTGPVTRSRSQGIEIKEDHTPLAVASRISKLIEESSKDEVAVKDNSLFESVVPTSKQPKDTLNPNVMSVMMADVDQDERIAEIERKV
        KKA +  + +S++YTGP+TRSRS+GI  ++D     VA  I K + ES K  + +K+N L+++   +S + K   +P+VMSVMMAD+  +  +AE+ERK+
Subjt:  KKAPAKVTTSSDSYTGPVTRSRSQGIEIKEDHTPLAVASRISKLIEESSKDEVAVKDNSLFESVVPTSKQPKDTLNPNVMSVMMADVDQDERIAEIERKV

Query:  HLLMKAVDERD
        + LMKAV+ERD
Subjt:  HLLMKAVDERD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTCGCCACAAGCCTAGCCGCAATAGTTGAGGCCAAAGCAGGACAGGCTGATCCCAGTGCCCCAATAGAAGGAGGAGAGTCTGAACCCATGGACTCAGTAGACGATGT
GCCTCTCAGACAACATCGCACATTTCGGGCACCTACGCTATTGTGTGGTCCTGCAGGCAATGCAAGACCAGATCTCCCAGTGCAAGTGGGAGCTAGTCTGCGAGGCGATT
CCCGATTACGTCCCTACGCTAGTCCACAAATTCTATCTGATATGCCAGAGGTAGAGAGGAATGGTCCGTGGCAACGTCGTGACCTTTTCGCTAAGCATCATCAATATTTT
CTGGAGCTACCTGATACGCCAGAGGTAGAGAGGAATGCGCTTCTCAACTTCCAAGACGAAGACTTCTTGAGTGAAGTCTTGGCAACAGTCGCCAGGCTCGACGCAAAGTG
GGAAGGGCGTGGTGTTGGGTTTTATAACCTAAAACTCAAAAAAGCTCCCGCGAAGGTTACCACATCAAGCGACTCTTACACTGGTCCTGTCACTCGTAGTCGTTCCCAAG
GAATTGAGATCAAGGAGGATCATACTCCTCTTGCTGTTGCAAGCAGGATCTCAAAGCTAATTGAAGAATCTTCTAAGGATGAGGTTGCAGTCAAAGACAACTCACTGTTC
GAATCTGTCGTTCCAACATCTAAGCAGCCAAAGGATACACTAAATCCTAATGTGATGTCCGTCATGATGGCTGATGTAGACCAGGATGAAAGAATTGCAGAGATTGAAAG
AAAAGTCCATCTCTTAATGAAGGCAGTTGATGAAAGAGATCTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGTCGCCACAAGCCTAGCCGCAATAGTTGAGGCCAAAGCAGGACAGGCTGATCCCAGTGCCCCAATAGAAGGAGGAGAGTCTGAACCCATGGACTCAGTAGACGATGT
GCCTCTCAGACAACATCGCACATTTCGGGCACCTACGCTATTGTGTGGTCCTGCAGGCAATGCAAGACCAGATCTCCCAGTGCAAGTGGGAGCTAGTCTGCGAGGCGATT
CCCGATTACGTCCCTACGCTAGTCCACAAATTCTATCTGATATGCCAGAGGTAGAGAGGAATGGTCCGTGGCAACGTCGTGACCTTTTCGCTAAGCATCATCAATATTTT
CTGGAGCTACCTGATACGCCAGAGGTAGAGAGGAATGCGCTTCTCAACTTCCAAGACGAAGACTTCTTGAGTGAAGTCTTGGCAACAGTCGCCAGGCTCGACGCAAAGTG
GGAAGGGCGTGGTGTTGGGTTTTATAACCTAAAACTCAAAAAAGCTCCCGCGAAGGTTACCACATCAAGCGACTCTTACACTGGTCCTGTCACTCGTAGTCGTTCCCAAG
GAATTGAGATCAAGGAGGATCATACTCCTCTTGCTGTTGCAAGCAGGATCTCAAAGCTAATTGAAGAATCTTCTAAGGATGAGGTTGCAGTCAAAGACAACTCACTGTTC
GAATCTGTCGTTCCAACATCTAAGCAGCCAAAGGATACACTAAATCCTAATGTGATGTCCGTCATGATGGCTGATGTAGACCAGGATGAAAGAATTGCAGAGATTGAAAG
AAAAGTCCATCTCTTAATGAAGGCAGTTGATGAAAGAGATCTTTAG
Protein sequenceShow/hide protein sequence
MVATSLAAIVEAKAGQADPSAPIEGGESEPMDSVDDVPLRQHRTFRAPTLLCGPAGNARPDLPVQVGASLRGDSRLRPYASPQILSDMPEVERNGPWQRRDLFAKHHQYF
LELPDTPEVERNALLNFQDEDFLSEVLATVARLDAKWEGRGVGFYNLKLKKAPAKVTTSSDSYTGPVTRSRSQGIEIKEDHTPLAVASRISKLIEESSKDEVAVKDNSLF
ESVVPTSKQPKDTLNPNVMSVMMADVDQDERIAEIERKVHLLMKAVDERDL