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Lag0017904 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0017904
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRetrovirus-related Pol polyprotein from transposon opus
Genome locationchr5:11175977..11176531
RNA-Seq ExpressionLag0017904
SyntenyLag0017904
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG8501049.1 hypothetical protein CXB51_003148 [Gossypium anomalum]3.5e-0940Show/hide
Query:  KRGLTMRVCNEEVKFNVFKAMKYHDEMQDCSFIRILESTIVER---AIQDLADKHLEDHGEVSVEDLEVCSLERKNEKELFRCEDVFESLDLDQRKAPPI
        K  LTM V +++V FNVFK+M++ D + DCS +  LE  IVE+   +++DL ++ L        E+ E  +L   N+K  F  +  FESLDL++R     
Subjt:  KRGLTMRVCNEEVKFNVFKAMKYHDEMQDCSFIRILESTIVER---AIQDLADKHLEDHGEVSVEDLEVCSLERKNEKELFRCEDVFESLDLDQRKAPPI

Query:  KPSLIEAPTLDLKPLSDHLK
        K S+ E P L+LK L  HLK
Subjt:  KPSLIEAPTLDLKPLSDHLK

XP_017233064.1 PREDICTED: uncharacterized protein LOC108207111 [Daucus carota subsp. sativus]1.3e-0838.98Show/hide
Query:  LTMRVCNEEVKFNVFKAMKYHDEMQDCSFIRILESTIVERAIQDLADKHLE----DHGEVSVEDLEVCSLERKNEKELFRCEDVFESLDLDQRKAPPIKP
        LTMRV +E+V FNVFKAMKY D+++DCS I I +  I ++   + +   LE    +  +   +++E+ +    N  ++ R    FESLDL  R+    K 
Subjt:  LTMRVCNEEVKFNVFKAMKYHDEMQDCSFIRILESTIVERAIQDLADKHLE----DHGEVSVEDLEVCSLERKNEKELFRCEDVFESLDLDQRKAPPIKP

Query:  SLIEAPTLDLKPLSDHLK
        S+ E P L+LK L  HLK
Subjt:  SLIEAPTLDLKPLSDHLK

XP_024022362.1 uncharacterized protein LOC112091881 [Morus notabilis]7.8e-0937.4Show/hide
Query:  KRGLTMRVCNEEVKFNVFKAMKYHDEMQDCSFIRILESTIVERAIQDLADKHLEDHGEVSVE------DLEVCSLERKNEKELFRCEDVFESLDLDQRKA
        K  LTMRV +++V FNVFKAM++ DE+++CS + IL+S +     +  A+K + +   +  E      D +V  LE ++     R    FESLDL  +  
Subjt:  KRGLTMRVCNEEVKFNVFKAMKYHDEMQDCSFIRILESTIVERAIQDLADKHLEDHGEVSVE------DLEVCSLERKNEKELFRCEDVFESLDLDQRKA

Query:  PPIKPSLIEAPTLDLKPLSDHLK
           KPS+ E P L+L+PL  HL+
Subjt:  PPIKPSLIEAPTLDLKPLSDHLK

XP_024024961.1 uncharacterized protein LOC112092618 [Morus notabilis]7.8e-0935.77Show/hide
Query:  KRGLTMRVCNEEVKFNVFKAMKYHDEMQDCSFIRILESTIVERAIQDLADKHLEDHGEVSVE------DLEVCSLERKNEKELFRCEDVFESLDLDQRKA
        K  LTMRV +++V FNVFK M++ DE+++CS I +L+S +     +  A+K + +   +  E      D ++  LE +      R    FESL+L +R  
Subjt:  KRGLTMRVCNEEVKFNVFKAMKYHDEMQDCSFIRILESTIVERAIQDLADKHLEDHGEVSVE------DLEVCSLERKNEKELFRCEDVFESLDLDQRKA

Query:  PPIKPSLIEAPTLDLKPLSDHLK
           KPS+ E P L+L+PL  HL+
Subjt:  PPIKPSLIEAPTLDLKPLSDHLK

XP_030504461.1 uncharacterized protein LOC115719521 [Cannabis sativa]1.6e-0936.89Show/hide
Query:  LTMRVCNEEVKFNVFKAMKYHDEMQDCSFIRILESTIVERAIQDLADKHLEDHGEV-SVEDLEVCSLERKNE-------KELFRCEDVFESLDLDQRKAP
        LTMRV +++V FNVF AM++ DE+++CS + +++S + E        K  +D   + S+EDLE  S + + +       +   + +  FESL+L +    
Subjt:  LTMRVCNEEVKFNVFKAMKYHDEMQDCSFIRILESTIVERAIQDLADKHLEDHGEV-SVEDLEVCSLERKNE-------KELFRCEDVFESLDLDQRKAP

Query:  PIKPSLIEAPTLDLKPLSDHLK
        P+KPS+ E P L+LKPL  HLK
Subjt:  PIKPSLIEAPTLDLKPLSDHLK

TrEMBL top hitse value%identityAlignment
A0A1S3YJE3 uncharacterized protein LOC1077766775.5e-0839.67Show/hide
Query:  LTMRVCNEEVKFNVFKAMKYHDEMQDCSFIRILESTIVERAIQDLADKH-----LEDHGEVSVEDLE--VCSLERKNEKELFRCEDVFESLDLDQRKAPP
        L MR+ +EE+ FNV K+M+  +E  +CS I +++  I+E   + L  K      L +  EV+ EDL   V +LE +     ++ E  FE L L++RK PP
Subjt:  LTMRVCNEEVKFNVFKAMKYHDEMQDCSFIRILESTIVERAIQDLADKH-----LEDHGEVSVEDLE--VCSLERKNEKELFRCEDVFESLDLDQRKAPP

Query:  IKPSLIEAPTLDLKPLSDHLK
         KPS+ E P L+LKPL  HL+
Subjt:  IKPSLIEAPTLDLKPLSDHLK

A0A1S4DSK9 uncharacterized protein LOC1078327647.1e-0840.34Show/hide
Query:  LTMRVCNEEVKFNVFKAMKYHDEMQDCSFIRILESTIVERAIQDLADKH-----LEDHGEVSVEDLEVCSLERKNEKELFRCEDVFESLDLDQRKAPPIK
        L MR+ N+E+ FNV K+M+  +E  +CS I  ++  I+E A + L  K      L +  EV+ EDL    L  + + E  + E  F+SL L++RK PP K
Subjt:  LTMRVCNEEVKFNVFKAMKYHDEMQDCSFIRILESTIVERAIQDLADKH-----LEDHGEVSVEDLEVCSLERKNEKELFRCEDVFESLDLDQRKAPPIK

Query:  PSLIEAPTLDLKPLSDHLK
        PS+ E P L+LKPL  HL+
Subjt:  PSLIEAPTLDLKPLSDHLK

A0A1U7WSI3 uncharacterized protein LOC1042293427.1e-0840.34Show/hide
Query:  LTMRVCNEEVKFNVFKAMKYHDEMQDCSFIRILESTIVERAIQDLADKH-----LEDHGEVSVEDLEVCSLERKNEKELFRCEDVFESLDLDQRKAPPIK
        L MR+ N+E+ FNV K+M+  +E  +CS I  ++  I+E A + L  K      L +  EV+ EDL    L  + + E  + E  F+SL L++RK PP K
Subjt:  LTMRVCNEEVKFNVFKAMKYHDEMQDCSFIRILESTIVERAIQDLADKH-----LEDHGEVSVEDLEVCSLERKNEKELFRCEDVFESLDLDQRKAPPIK

Query:  PSLIEAPTLDLKPLSDHLK
        PS+ E P L+LKPL  HL+
Subjt:  PSLIEAPTLDLKPLSDHLK

A0A1U7WT89 uncharacterized protein LOC1042306472.5e-0840.5Show/hide
Query:  LTMRVCNEEVKFNVFKAMKYHDEMQDCSFIRILESTIVERAIQDLADKH-----LEDHGEVSVEDLE--VCSLERKNEKELFRCEDVFESLDLDQRKAPP
        L MR+ +EE+ FNV K+M+   E  +CS I  ++  I+E   + L  K      L +  E + EDL   V +LE +     +R E  FE+L L++RK PP
Subjt:  LTMRVCNEEVKFNVFKAMKYHDEMQDCSFIRILESTIVERAIQDLADKH-----LEDHGEVSVEDLE--VCSLERKNEKELFRCEDVFESLDLDQRKAPP

Query:  IKPSLIEAPTLDLKPLSDHLK
         KPS+ E P L+LKPLS H K
Subjt:  IKPSLIEAPTLDLKPLSDHLK

A0A1U8PNU0 uncharacterized protein LOC1079610961.6e-0738.52Show/hide
Query:  KRGLTMRVCNEEVKFNVFKAMKYHDEMQDCSFIRILESTIVERAIQDLADKHLEDHGEVSVEDLEVCSLERKNE----KELF-RCEDVFESLDLDQRKAP
        K  LT+RV +++V FNVF A+K  D+ ++C  I ++E  +VE     L   +  D  E S+E ++  SLE   E    K++  R    F+SLDL      
Subjt:  KRGLTMRVCNEEVKFNVFKAMKYHDEMQDCSFIRILESTIVERAIQDLADKHLEDHGEVSVEDLEVCSLERKNE----KELF-RCEDVFESLDLDQRKAP

Query:  PIKPSLIEAPTLDLKPLSDHLK
        P KPS  +  TL+LKPL  HLK
Subjt:  PIKPSLIEAPTLDLKPLSDHLK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTCAAAAGGGGATTAACAATGAGAGTCTGTAATGAGGAAGTAAAATTTAATGTGTTTAAGGCTATGAAATATCATGACGAAATGCAAGATTGCTCTTTCATTAGGAT
TCTGGAGAGCACAATTGTTGAGAGAGCAATACAGGATTTGGCTGACAAGCATTTGGAAGATCATGGAGAGGTTAGTGTAGAAGATTTAGAAGTTTGTTCGTTAGAAAGAA
AAAATGAAAAAGAATTGTTTAGGTGTGAGGATGTTTTTGAGTCTTTAGATTTAGATCAAAGGAAGGCTCCTCCTATTAAGCCATCCCTGATTGAGGCACCTACTTTAGAC
TTGAAGCCCTTGTCGGATCATCTAAAAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNTGTTTGTGGAGCCCTTGAGCATCTGAGTTCGGGCTATAGTTTTGAGCTTTCTTTGAATTATGCATATGGTTGTTTTCTGGATGCTACTTTTG
CATGA
mRNA sequenceShow/hide mRNA sequence
ATGTTCAAAAGGGGATTAACAATGAGAGTCTGTAATGAGGAAGTAAAATTTAATGTGTTTAAGGCTATGAAATATCATGACGAAATGCAAGATTGCTCTTTCATTAGGAT
TCTGGAGAGCACAATTGTTGAGAGAGCAATACAGGATTTGGCTGACAAGCATTTGGAAGATCATGGAGAGGTTAGTGTAGAAGATTTAGAAGTTTGTTCGTTAGAAAGAA
AAAATGAAAAAGAATTGTTTAGGTGTGAGGATGTTTTTGAGTCTTTAGATTTAGATCAAAGGAAGGCTCCTCCTATTAAGCCATCCCTGATTGAGGCACCTACTTTAGAC
TTGAAGCCCTTGTCGGATCATCTAAAAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNTGTTTGTGGAGCCCTTGAGCATCTGAGTTCGGGCTATAGTTTTGAGCTTTCTTTGAATTATGCATATGGTTGTTTTCTGGATGCTACTTTTG
CATGA
Protein sequenceShow/hide protein sequence
MFKRGLTMRVCNEEVKFNVFKAMKYHDEMQDCSFIRILESTIVERAIQDLADKHLEDHGEVSVEDLEVCSLERKNEKELFRCEDVFESLDLDQRKAPPIKPSLIEAPTLD
LKPLSDHLKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVCGALEHLSSGYSFELSLNYAYGCFLDATFA