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Lag0017909 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0017909
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRT_RNaseH_2 domain-containing protein
Genome locationchr5:11463645..11464638
RNA-Seq ExpressionLag0017909
SyntenyLag0017909
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8658284.1 hypothetical protein F3Y22_tig00116971pilonHSYRG00034 [Hibiscus syriacus]1.4e-0835.14Show/hide
Query:  RFVNELARANYQDVLKRDFLFERGF-------GSDLPRFLEFGIANLGWRQFCVKPEPVNANIVREFYANLDVKDDFEVIVRGVPVQWSPEAINNLFDLQ
        +F ++ A+A +Q+   R   FE GF       G   P  ++  +  L W++F   P  VNA++V+EFYAN+   +   + VRG  ++++P AIN  F LQ
Subjt:  RFVNELARANYQDVLKRDFLFERGF-------GSDLPRFLEFGIANLGWRQFCVKPEPVNANIVREFYANLDVKDDFEVIVRGVPVQWSPEAINNLFDLQ

Query:  DFL--HAIFNE
        D +  HA F E
Subjt:  DFL--HAIFNE

KAE8661093.1 hypothetical protein F3Y22_tig00116939pilonHSYRG00213 [Hibiscus syriacus]1.4e-0835.14Show/hide
Query:  RFVNELARANYQDVLKRDFLFERGF-------GSDLPRFLEFGIANLGWRQFCVKPEPVNANIVREFYANLDVKDDFEVIVRGVPVQWSPEAINNLFDLQ
        +F N+ A+A +Q+   R   FE GF       G   P  ++  +  L W++F   P  VNA++V+EFYAN+   + + + VRG  ++++  AIN+ F LQ
Subjt:  RFVNELARANYQDVLKRDFLFERGF-------GSDLPRFLEFGIANLGWRQFCVKPEPVNANIVREFYANLDVKDDFEVIVRGVPVQWSPEAINNLFDLQ

Query:  DFL--HAIFNE
        D +  HA F E
Subjt:  DFL--HAIFNE

KAE8695166.1 hypothetical protein F3Y22_tig00110733pilonHSYRG00282 [Hibiscus syriacus]1.3e-0939.81Show/hide
Query:  FVNELARANYQDVLKRDFLFERGFGSDLPRFLEFGIANLG-----------WRQFCVKPEPVNANIVREFYANLDVKDDFEVIVRGVPVQWSPEAINNLF
        FV+E A+ +YQ +  R   FE GF      F E   ANLG           W++F   P PVNA IV+EFY+N+   +   V+VRG+ ++++P AIN  F
Subjt:  FVNELARANYQDVLKRDFLFERGFGSDLPRFLEFGIANLG-----------WRQFCVKPEPVNANIVREFYANLDVKDDFEVIVRGVPVQWSPEAINNLF

Query:  DLQ
         LQ
Subjt:  DLQ

PON42276.1 hypothetical protein PanWU01x14_283280 [Parasponia andersonii]4.8e-0937.61Show/hide
Query:  IRFVNELARANYQD-VLKRDFLFERGFGSD------LPRFLEFGIANLGWRQFCVKPEPVNANIVREFYANLDVKDDFEVIVRGVPVQWSPEAINNLFDL
        ++  +E A   Y++ +  R    E+GF  D       P F+E  I    W+ FC  PE + A +VREFYAN+   DD  V VRGV V  S EAIN ++ L
Subjt:  IRFVNELARANYQD-VLKRDFLFERGFGSD------LPRFLEFGIANLGWRQFCVKPEPVNANIVREFYANLDVKDDFEVIVRGVPVQWSPEAINNLFDL

Query:  QDFL--HAIFNEMMVVP
         D +  H+ F E +  P
Subjt:  QDFL--HAIFNEMMVVP

PON46472.1 hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii]1.4e-0840.78Show/hide
Query:  IRFVNELARANYQ-DVLKRDFLFERGFGSD-------LPRFLEFGIANLGWRQFCVKPEPVNANIVREFYANLDVKDDFEVIVRGVPVQWSPEAINNLFD
        ++F  E A   Y+ ++  R    E+GF  D       LP F+   I    W+QFC  PE     +VREFYANL   ++  V VRGV V WS EAIN +F 
Subjt:  IRFVNELARANYQ-DVLKRDFLFERGFGSD-------LPRFLEFGIANLGWRQFCVKPEPVNANIVREFYANLDVKDDFEVIVRGVPVQWSPEAINNLFD

Query:  LQD
        L D
Subjt:  LQD

TrEMBL top hitse value%identityAlignment
A0A2P5B0K0 Uncharacterized protein2.3e-0937.61Show/hide
Query:  IRFVNELARANYQD-VLKRDFLFERGFGSD------LPRFLEFGIANLGWRQFCVKPEPVNANIVREFYANLDVKDDFEVIVRGVPVQWSPEAINNLFDL
        ++  +E A   Y++ +  R    E+GF  D       P F+E  I    W+ FC  PE + A +VREFYAN+   DD  V VRGV V  S EAIN ++ L
Subjt:  IRFVNELARANYQD-VLKRDFLFERGFGSD------LPRFLEFGIANLGWRQFCVKPEPVNANIVREFYANLDVKDDFEVIVRGVPVQWSPEAINNLFDL

Query:  QDFL--HAIFNEMMVVP
         D +  H+ F E +  P
Subjt:  QDFL--HAIFNEMMVVP

A0A2P5BCG4 Uncharacterized protein (Fragment)6.8e-0940.78Show/hide
Query:  IRFVNELARANYQ-DVLKRDFLFERGFGSD-------LPRFLEFGIANLGWRQFCVKPEPVNANIVREFYANLDVKDDFEVIVRGVPVQWSPEAINNLFD
        ++F  E A   Y+ ++  R    E+GF  D       LP F+   I    W+QFC  PE     +VREFYANL   ++  V VRGV V WS EAIN +F 
Subjt:  IRFVNELARANYQ-DVLKRDFLFERGFGSD-------LPRFLEFGIANLGWRQFCVKPEPVNANIVREFYANLDVKDDFEVIVRGVPVQWSPEAINNLFD

Query:  LQD
        L D
Subjt:  LQD

A0A6A2WM54 Uncharacterized protein6.8e-0935.14Show/hide
Query:  RFVNELARANYQDVLKRDFLFERGF-------GSDLPRFLEFGIANLGWRQFCVKPEPVNANIVREFYANLDVKDDFEVIVRGVPVQWSPEAINNLFDLQ
        +F N+ A+A +Q+   R   FE GF       G   P  ++  +  L W++F   P  VNA++V+EFYAN+   + + + VRG  ++++  AIN+ F LQ
Subjt:  RFVNELARANYQDVLKRDFLFERGF-------GSDLPRFLEFGIANLGWRQFCVKPEPVNANIVREFYANLDVKDDFEVIVRGVPVQWSPEAINNLFDLQ

Query:  DFL--HAIFNE
        D +  HA F E
Subjt:  DFL--HAIFNE

A0A6A2XVV9 Uncharacterized protein6.8e-0935.14Show/hide
Query:  RFVNELARANYQDVLKRDFLFERGF-------GSDLPRFLEFGIANLGWRQFCVKPEPVNANIVREFYANLDVKDDFEVIVRGVPVQWSPEAINNLFDLQ
        +F ++ A+A +Q+   R   FE GF       G   P  ++  +  L W++F   P  VNA++V+EFYAN+   +   + VRG  ++++P AIN  F LQ
Subjt:  RFVNELARANYQDVLKRDFLFERGF-------GSDLPRFLEFGIANLGWRQFCVKPEPVNANIVREFYANLDVKDDFEVIVRGVPVQWSPEAINNLFDLQ

Query:  DFL--HAIFNE
        D +  HA F E
Subjt:  DFL--HAIFNE

A0A6A2ZUE4 Uncharacterized protein6.1e-1039.81Show/hide
Query:  FVNELARANYQDVLKRDFLFERGFGSDLPRFLEFGIANLG-----------WRQFCVKPEPVNANIVREFYANLDVKDDFEVIVRGVPVQWSPEAINNLF
        FV+E A+ +YQ +  R   FE GF      F E   ANLG           W++F   P PVNA IV+EFY+N+   +   V+VRG+ ++++P AIN  F
Subjt:  FVNELARANYQDVLKRDFLFERGFGSDLPRFLEFGIANLG-----------WRQFCVKPEPVNANIVREFYANLDVKDDFEVIVRGVPVQWSPEAINNLF

Query:  DLQ
         LQ
Subjt:  DLQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATTGCTCTGCGACACGTGGCTTCATCAGATGATGCATGCAAATTTACCTGTGAAAATTCAAAGCCAAATCCCAACGGGTCAGAGGTTGAGGAGCAGGCCGTAGGTAT
GCCTGAAAAAGAGAAAACACCGGAGCCGGTGCAGGAGGCTCATGTTGAAGTCGTAATGCCTGAACCACCAAAGCGTCGCCGCATCAAACGAAAGGTGGGTCGCGTGAGGG
TGATTCGGAACACTCCATCGCCTCCGACGTCAGACTTTGAGGAAGAAAAGAGGGAAGCTGAAAATAAGGCAAAGGAAGAAGAGGCAAGGAAGGCAGAGGAAAAGATTTTG
CGCGAGCAAAGTGAAGACAAGGGCAAAGGAATTGCCGAAGCATCGGGTGAGATTGAGGAACCAAGGGTACCGCTCATTCGCTTTGTCAACGAGCTTGCGAGAGCAAATTA
CCAAGATGTGCTGAAGCGTGATTTCTTGTTCGAGCGGGGATTTGGCAGTGATTTGCCAAGGTTCTTAGAGTTTGGAATAGCGAACCTTGGGTGGAGGCAGTTTTGTGTGA
AGCCTGAACCTGTCAATGCCAACATTGTTCGAGAATTCTACGCTAATCTTGATGTTAAGGATGACTTTGAAGTTATAGTTCGAGGAGTGCCTGTACAGTGGAGCCCAGAA
GCCATTAATAATTTGTTTGATCTCCAGGATTTTCTGCATGCAATTTTTAATGAGATGATGGTTGTGCCATCGAGCGACCAATTAAGTGCGGCGGTCTGA
mRNA sequenceShow/hide mRNA sequence
ATGATTGCTCTGCGACACGTGGCTTCATCAGATGATGCATGCAAATTTACCTGTGAAAATTCAAAGCCAAATCCCAACGGGTCAGAGGTTGAGGAGCAGGCCGTAGGTAT
GCCTGAAAAAGAGAAAACACCGGAGCCGGTGCAGGAGGCTCATGTTGAAGTCGTAATGCCTGAACCACCAAAGCGTCGCCGCATCAAACGAAAGGTGGGTCGCGTGAGGG
TGATTCGGAACACTCCATCGCCTCCGACGTCAGACTTTGAGGAAGAAAAGAGGGAAGCTGAAAATAAGGCAAAGGAAGAAGAGGCAAGGAAGGCAGAGGAAAAGATTTTG
CGCGAGCAAAGTGAAGACAAGGGCAAAGGAATTGCCGAAGCATCGGGTGAGATTGAGGAACCAAGGGTACCGCTCATTCGCTTTGTCAACGAGCTTGCGAGAGCAAATTA
CCAAGATGTGCTGAAGCGTGATTTCTTGTTCGAGCGGGGATTTGGCAGTGATTTGCCAAGGTTCTTAGAGTTTGGAATAGCGAACCTTGGGTGGAGGCAGTTTTGTGTGA
AGCCTGAACCTGTCAATGCCAACATTGTTCGAGAATTCTACGCTAATCTTGATGTTAAGGATGACTTTGAAGTTATAGTTCGAGGAGTGCCTGTACAGTGGAGCCCAGAA
GCCATTAATAATTTGTTTGATCTCCAGGATTTTCTGCATGCAATTTTTAATGAGATGATGGTTGTGCCATCGAGCGACCAATTAAGTGCGGCGGTCTGA
Protein sequenceShow/hide protein sequence
MIALRHVASSDDACKFTCENSKPNPNGSEVEEQAVGMPEKEKTPEPVQEAHVEVVMPEPPKRRRIKRKVGRVRVIRNTPSPPTSDFEEEKREAENKAKEEEARKAEEKIL
REQSEDKGKGIAEASGEIEEPRVPLIRFVNELARANYQDVLKRDFLFERGFGSDLPRFLEFGIANLGWRQFCVKPEPVNANIVREFYANLDVKDDFEVIVRGVPVQWSPE
AINNLFDLQDFLHAIFNEMMVVPSSDQLSAAV