| GenBank top hits | e value | %identity | Alignment |
|---|
| KAG6596753.1 DNA-directed RNA polymerases I and III subunit RPAC1, partial [Cucurbita argyrosperma subsp. sororia] | 3.7e-189 | 90.58 | Show/hide |
Query: MSAKDKNLYNMSESESEQEGAGKEGIEWIMNLPDVPMKLPPHVELQRTRVECKADAPIHTDTIQYSGAFASMGVDNSLRLDYFRNNFKIEVIDLREDDIE
MS KDKNL+NMSES+SEQE GKEGIEWIMNLPDVPMKLPPHVELQRTRVECKADAPIHTDTIQYSGA+AS+G+DNSLRLD FR NFKIEVIDL+EDD+E
Subjt: MSAKDKNLYNMSESESEQEGAGKEGIEWIMNLPDVPMKLPPHVELQRTRVECKADAPIHTDTIQYSGAFASMGVDNSLRLDYFRNNFKIEVIDLREDDIE
Query: FDMIGIDPALANAFRRILIAEVPTMAIEKVLVANNTSIIQDEVLAHRLGLIPIHADPRLFEYSDKDTPNEKNTVVFRLHARCERGKPRLTVTSKALTWLP
FDMIGIDP+LANAFRRILIAEVPTMAIEKVLVANNTSI+QDEVLAHRLGLIPI DPRLFEYSDKDTPNEKNT+VFRLH RCERGKPRLT TSKALTWLP
Subjt: FDMIGIDPALANAFRRILIAEVPTMAIEKVLVANNTSIIQDEVLAHRLGLIPIHADPRLFEYSDKDTPNEKNTVVFRLHARCERGKPRLTVTSKALTWLP
Query: NGSEFPLVSDKSVPNSKPKTYTSFSCSQDTLPEFSNNPIGPKESDIIIARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELAD
NGSEFPLVSDKSV N+KPKTYTSFSCSQDTLPEF+NNPIGPK+ DII+ARL GQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLE+IEDELA+
Subjt: NGSEFPLVSDKSVPNSKPKTYTSFSCSQDTLPEFSNNPIGPKESDIIIARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELAD
Query: ELKKKCPVNVFDIEDIANGKKRATVARPRACTLCRECIRGEAWEKRVSLHRVKDHFISHFE
ELK KCPVNVFDIEDIANGKKRATVARPRACTLCRECIRGEAWEKRVSL RVKDHFI E
Subjt: ELKKKCPVNVFDIEDIANGKKRATVARPRACTLCRECIRGEAWEKRVSLHRVKDHFISHFE
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| XP_022936430.1 DNA-directed RNA polymerases I and III subunit RPAC1 [Cucurbita moschata] | 3.7e-189 | 90.58 | Show/hide |
Query: MSAKDKNLYNMSESESEQEGAGKEGIEWIMNLPDVPMKLPPHVELQRTRVECKADAPIHTDTIQYSGAFASMGVDNSLRLDYFRNNFKIEVIDLREDDIE
MS KDKNL+NMSES+SEQE GKEGIEWIMNLPDVPMKLPPHVELQRTRVECKADAPIHTDTIQYSGA+AS+G+DNSLRLD FR NFKIEVIDL+EDD+E
Subjt: MSAKDKNLYNMSESESEQEGAGKEGIEWIMNLPDVPMKLPPHVELQRTRVECKADAPIHTDTIQYSGAFASMGVDNSLRLDYFRNNFKIEVIDLREDDIE
Query: FDMIGIDPALANAFRRILIAEVPTMAIEKVLVANNTSIIQDEVLAHRLGLIPIHADPRLFEYSDKDTPNEKNTVVFRLHARCERGKPRLTVTSKALTWLP
FDMIGIDP+LANAFRRILIAEVPTMAIEKVLVANNTSI+QDEVLAHRLGLIPI DPRLFEYSDKDTPNEKNT+VFRLH RCERGKPRLT TSKALTWLP
Subjt: FDMIGIDPALANAFRRILIAEVPTMAIEKVLVANNTSIIQDEVLAHRLGLIPIHADPRLFEYSDKDTPNEKNTVVFRLHARCERGKPRLTVTSKALTWLP
Query: NGSEFPLVSDKSVPNSKPKTYTSFSCSQDTLPEFSNNPIGPKESDIIIARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELAD
NGSEFPLVSDKSV N+KPKTYTSFSCSQDTLPEF+NNPIGPK+ DII+ARL GQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLE+IEDELA+
Subjt: NGSEFPLVSDKSVPNSKPKTYTSFSCSQDTLPEFSNNPIGPKESDIIIARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELAD
Query: ELKKKCPVNVFDIEDIANGKKRATVARPRACTLCRECIRGEAWEKRVSLHRVKDHFISHFE
ELK KCPVNVFDIEDIANGKKRATVARPRACTLCRECIRGEAWEKRVSL RVKDHFI E
Subjt: ELKKKCPVNVFDIEDIANGKKRATVARPRACTLCRECIRGEAWEKRVSLHRVKDHFISHFE
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| XP_023005438.1 DNA-directed RNA polymerases I and III subunit RPAC1 [Cucurbita maxima] | 2.4e-188 | 90.3 | Show/hide |
Query: MSAKDKNLYNMSESESEQEGAGKEGIEWIMNLPDVPMKLPPHVELQRTRVECKADAPIHTDTIQYSGAFASMGVDNSLRLDYFRNNFKIEVIDLREDDIE
MS +DKNL++MSES+SEQE GKEGIEWIMNLPDVPMKLPPHVELQRTRVECKADAPIHTDTIQYSGA+AS+G+DNSLRLD FR NFKIEVIDL+EDD+E
Subjt: MSAKDKNLYNMSESESEQEGAGKEGIEWIMNLPDVPMKLPPHVELQRTRVECKADAPIHTDTIQYSGAFASMGVDNSLRLDYFRNNFKIEVIDLREDDIE
Query: FDMIGIDPALANAFRRILIAEVPTMAIEKVLVANNTSIIQDEVLAHRLGLIPIHADPRLFEYSDKDTPNEKNTVVFRLHARCERGKPRLTVTSKALTWLP
FDMIGIDP+LANAFRRILIAEVPTMAIEKVLVANNTSI+QDEVLAHRLGLIPI DPRLFEYSDKDTPNEKNT+VFRLH RCERGKPRLT TS+ALTWLP
Subjt: FDMIGIDPALANAFRRILIAEVPTMAIEKVLVANNTSIIQDEVLAHRLGLIPIHADPRLFEYSDKDTPNEKNTVVFRLHARCERGKPRLTVTSKALTWLP
Query: NGSEFPLVSDKSVPNSKPKTYTSFSCSQDTLPEFSNNPIGPKESDIIIARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELAD
NGSEFPLVSDKSV NSKPKTYTSFSCSQDTLPEF+NNPIGPK+ DII+ARL GQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELA+
Subjt: NGSEFPLVSDKSVPNSKPKTYTSFSCSQDTLPEFSNNPIGPKESDIIIARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELAD
Query: ELKKKCPVNVFDIEDIANGKKRATVARPRACTLCRECIRGEAWEKRVSLHRVKDHFISHFE
ELK KCPVNVFDIEDIANGKKRATVARPRACTLCRECIRGEAWEKRVSL RVKDHFI E
Subjt: ELKKKCPVNVFDIEDIANGKKRATVARPRACTLCRECIRGEAWEKRVSLHRVKDHFISHFE
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| XP_023540473.1 DNA-directed RNA polymerases I and III subunit RPAC1 [Cucurbita pepo subsp. pepo] | 6.4e-189 | 90.58 | Show/hide |
Query: MSAKDKNLYNMSESESEQEGAGKEGIEWIMNLPDVPMKLPPHVELQRTRVECKADAPIHTDTIQYSGAFASMGVDNSLRLDYFRNNFKIEVIDLREDDIE
MS KDKNL+NMSES+SE E GKEGIEWIMNLPDVPMKLPPHVELQRTRVECKADAPIHTDTIQYSGA+AS+G+DNSLRLD FR NFKIEVIDL+EDD+E
Subjt: MSAKDKNLYNMSESESEQEGAGKEGIEWIMNLPDVPMKLPPHVELQRTRVECKADAPIHTDTIQYSGAFASMGVDNSLRLDYFRNNFKIEVIDLREDDIE
Query: FDMIGIDPALANAFRRILIAEVPTMAIEKVLVANNTSIIQDEVLAHRLGLIPIHADPRLFEYSDKDTPNEKNTVVFRLHARCERGKPRLTVTSKALTWLP
FDMIGIDP+LANAFRRILIAEVPTMAIEKVLVANNTSI+QDEVLAHRLGLIPI DPRLFEYSDKDTPNEKNT+VFRLH RCERGKPRLT TSKALTWLP
Subjt: FDMIGIDPALANAFRRILIAEVPTMAIEKVLVANNTSIIQDEVLAHRLGLIPIHADPRLFEYSDKDTPNEKNTVVFRLHARCERGKPRLTVTSKALTWLP
Query: NGSEFPLVSDKSVPNSKPKTYTSFSCSQDTLPEFSNNPIGPKESDIIIARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELAD
NGSEFPLVSDKSV N+KPKTYTSFSCSQDTLPEF+NNPIGPK+ DII+ARL GQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELA+
Subjt: NGSEFPLVSDKSVPNSKPKTYTSFSCSQDTLPEFSNNPIGPKESDIIIARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELAD
Query: ELKKKCPVNVFDIEDIANGKKRATVARPRACTLCRECIRGEAWEKRVSLHRVKDHFISHFE
ELK KCPVNVFDIEDIANGKKRATVARPRACTLCRECIRGEAWEKRVSL RVKDHFI E
Subjt: ELKKKCPVNVFDIEDIANGKKRATVARPRACTLCRECIRGEAWEKRVSLHRVKDHFISHFE
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| XP_038903474.1 DNA-directed RNA polymerases I and III subunit RPAC1 isoform X1 [Benincasa hispida] | 1.8e-191 | 92.52 | Show/hide |
Query: MSAKDKNLYNMSESESEQEGAGKEGIEWIMNLPDVPMKLPPHVELQRTRVECKADAPIHTDTIQYSGAFASMGVDNSLRLDYFRNNFKIEVIDLREDDIE
MS KDK+L+NMS+SESEQEG KEGIEWIMNLPDVPMKLPPH+ELQRTRVECKADAPIHTDTIQYSGAFASMGVDNSLRLDYFRNNFKIEVIDL+EDDIE
Subjt: MSAKDKNLYNMSESESEQEGAGKEGIEWIMNLPDVPMKLPPHVELQRTRVECKADAPIHTDTIQYSGAFASMGVDNSLRLDYFRNNFKIEVIDLREDDIE
Query: FDMIGIDPALANAFRRILIAEVPTMAIEKVLVANNTSIIQDEVLAHRLGLIPIHADPRLFEYSDKDTPNEKNTVVFRLHARCERGKPRLTVTSKALTWLP
FDMIGIDPALANAFRRILIAEVPTMAIEKVLVANNTSI+QDEVLAHRLGL+PIH DPRLFEYSDKDTPNEKNT+VFRLHA CERGK RLTVTSKALTWLP
Subjt: FDMIGIDPALANAFRRILIAEVPTMAIEKVLVANNTSIIQDEVLAHRLGLIPIHADPRLFEYSDKDTPNEKNTVVFRLHARCERGKPRLTVTSKALTWLP
Query: NGSEFPLVSDKSVPNSKPKTYTSFSCSQDTLPEFSNNPIGPKESDIIIARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELAD
NGSEFPLVSDKSV NSKPKTYTSFSCSQDTLPEFSNNPIGPK+SDII+ARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEI+DELA+
Subjt: NGSEFPLVSDKSVPNSKPKTYTSFSCSQDTLPEFSNNPIGPKESDIIIARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELAD
Query: ELKKKCPVNVFDIEDIANGKKRATVARPRACTLCRECIRGEAWEKRVSLHRVKDHFISHFE
ELKKKCPVNVFDIEDIA GKKRATVARPRACTLCRECIRG+ WEKRV+L RVKDHFI E
Subjt: ELKKKCPVNVFDIEDIANGKKRATVARPRACTLCRECIRGEAWEKRVSLHRVKDHFISHFE
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A0A0L637 DNA-directed RNA polymerases I and III subunit RPAC1 | 2.1e-185 | 90.33 | Show/hide |
Query: MSAKDKNLYNMSESESEQEGAGKEGIEWIMNLPDVPMKLPPHVELQRTRVECKADAPIHTDTIQYSGAFASMGVDNSLRLDYFRNNFKIEVIDLREDDIE
MS KDKNL+NMSESESEQEG KEGIEWIMNLPDVPMKLPPHVELQRTRVECKADAPIHTDTIQYSGAFASMG DNSLRLD FRNNFKIEVIDL+EDDIE
Subjt: MSAKDKNLYNMSESESEQEGAGKEGIEWIMNLPDVPMKLPPHVELQRTRVECKADAPIHTDTIQYSGAFASMGVDNSLRLDYFRNNFKIEVIDLREDDIE
Query: FDMIGIDPALANAFRRILIAEVPTMAIEKVLVANNTSIIQDEVLAHRLGLIPIHADPRLFEYSDKDTPNEKNTVVFRLHARCERGKPRLTVTSKALTWLP
FDMIGIDPALANAFRRILI+EVPTMAIEKVL ANNTSI+QDEVLAHRLGL+PI DPRLF+YSDKD PNE NT+VFRLHA CERGKPRLTVTSKALTWLP
Subjt: FDMIGIDPALANAFRRILIAEVPTMAIEKVLVANNTSIIQDEVLAHRLGLIPIHADPRLFEYSDKDTPNEKNTVVFRLHARCERGKPRLTVTSKALTWLP
Query: NGSEFPLVSDKSVPNSKPKTYTSFSCSQDTL-PEFSNNPIGPKESDIIIARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELA
NGSEFPLVSDKSV NSKPKTYTSFSCSQ+TL EFSNNPIGPK+SDII+ARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVL+EEIEDELA
Subjt: NGSEFPLVSDKSVPNSKPKTYTSFSCSQDTL-PEFSNNPIGPKESDIIIARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELA
Query: DELKKKCPVNVFDIEDIANGKKRATVARPRACTLCRECIRGEAWEKRVSLHRVKDHFISHFE
+EL+KKCPVNVFDIEDIA GKKRATVARPR CTLCRECIRG+AWEKRV+L RVKDHFI E
Subjt: DELKKKCPVNVFDIEDIANGKKRATVARPRACTLCRECIRGEAWEKRVSLHRVKDHFISHFE
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| A0A6J1DXI7 DNA-directed RNA polymerases I and III subunit RPAC1 | 4.9e-187 | 93.16 | Show/hide |
Query: MSESESEQEGAGKEGIEWIMNLPDVPMKLPPHVELQRTRVECKADAPIHTDTIQYSGAFASMGVDNSLRLDYFRNNFKIEVIDLREDDIEFDMIGIDPAL
MS+SESEQ AGKEGIEWIMNLPDVPMKLPPH+E+QRTRVECKADAPIHTDTIQYSGA+ASMGVDNSLRLDYFRNNFKIEVIDL EDDIEFDMIGIDPAL
Subjt: MSESESEQEGAGKEGIEWIMNLPDVPMKLPPHVELQRTRVECKADAPIHTDTIQYSGAFASMGVDNSLRLDYFRNNFKIEVIDLREDDIEFDMIGIDPAL
Query: ANAFRRILIAEVPTMAIEKVLVANNTSIIQDEVLAHRLGLIPIHADPRLFEYSDKDTPNEKNTVVFRLHARCERGKPRLTVTSKALTWLPNGSEFPLVSD
ANAFRRILIAEVPTMAIEKVLVANNTS+IQDEVLAHRLGLIPIH DPRLFEYSDKDTPNEKNT+VFRLHARCERGKPRLTVTSK LTWLPNGSEFPLVSD
Subjt: ANAFRRILIAEVPTMAIEKVLVANNTSIIQDEVLAHRLGLIPIHADPRLFEYSDKDTPNEKNTVVFRLHARCERGKPRLTVTSKALTWLPNGSEFPLVSD
Query: KSVPNSKPKTYTSFSCSQDTLPEFSNNPIGPKESDIIIARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELADELKKKCPVNV
KSVPNSKPKTYTSFSCSQDTLPEFSNN IGPK++DIIIARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWY+MLPEVVL EEIEDELA+ELKKKCPV+V
Subjt: KSVPNSKPKTYTSFSCSQDTLPEFSNNPIGPKESDIIIARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELADELKKKCPVNV
Query: FDIEDIANGKKRATVARPRACTLCRECIRGEAWEKRVSLHRVKDHFISHFE
FDIEDIANGKKRA VARPR+CTLCRECIRGEAWEKRVSL RVKDHFI E
Subjt: FDIEDIANGKKRATVARPRACTLCRECIRGEAWEKRVSLHRVKDHFISHFE
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| A0A6J1DY99 DNA-directed RNA polymerases I and III subunit RPAC1 | 1.8e-184 | 90.03 | Show/hide |
Query: MSAKDKNLYNMSESESEQEGAGKEGIEWIMNLPDVPMKLPPHVELQRTRVECKADAPIHTDTIQYSGAFASMGVDNSLRLDYFRNNFKIEVIDLREDDIE
MSAKDK ++ S+ EQ GKEGIEWIMNLPDVPMKLPPH+EL RTRVECKADAPIHTDTIQYSGA+ASMGVDNSL+LDYFRNNFKIEVIDL EDDIE
Subjt: MSAKDKNLYNMSESESEQEGAGKEGIEWIMNLPDVPMKLPPHVELQRTRVECKADAPIHTDTIQYSGAFASMGVDNSLRLDYFRNNFKIEVIDLREDDIE
Query: FDMIGIDPALANAFRRILIAEVPTMAIEKVLVANNTSIIQDEVLAHRLGLIPIHADPRLFEYSDKDTPNEKNTVVFRLHARCERGKPRLTVTSKALTWLP
FDMIGIDPALANAFRR LIAEVPTMAIEKVLVANNTSIIQDEVLAHRLGL+PIH DPRLFEYSD+DTPNEKNT+VFRLHARCERGKPRLTVTSKALTWLP
Subjt: FDMIGIDPALANAFRRILIAEVPTMAIEKVLVANNTSIIQDEVLAHRLGLIPIHADPRLFEYSDKDTPNEKNTVVFRLHARCERGKPRLTVTSKALTWLP
Query: NGSEFPLVSDKSVPNSKPKTYTSFSCSQDTLPEFSNNPIGPKESDIIIARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELAD
NGSEFPLVSDKSVPNSKPKTYTSFSCSQD LPEFS NPIGPK+SDIIIARL PGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELA+
Subjt: NGSEFPLVSDKSVPNSKPKTYTSFSCSQDTLPEFSNNPIGPKESDIIIARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELAD
Query: ELKKKCPVNVFDIEDIANGKKRATVARPRACTLCRECIRGEAWEKRVSLHRVKDHFISHFE
ELK KCPV+VFDIEDIANGKKRATV RPR+CTLCRECIRGEAWEKRVSL RVK+HFI E
Subjt: ELKKKCPVNVFDIEDIANGKKRATVARPRACTLCRECIRGEAWEKRVSLHRVKDHFISHFE
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| A0A6J1FDA3 DNA-directed RNA polymerases I and III subunit RPAC1 | 1.8e-189 | 90.58 | Show/hide |
Query: MSAKDKNLYNMSESESEQEGAGKEGIEWIMNLPDVPMKLPPHVELQRTRVECKADAPIHTDTIQYSGAFASMGVDNSLRLDYFRNNFKIEVIDLREDDIE
MS KDKNL+NMSES+SEQE GKEGIEWIMNLPDVPMKLPPHVELQRTRVECKADAPIHTDTIQYSGA+AS+G+DNSLRLD FR NFKIEVIDL+EDD+E
Subjt: MSAKDKNLYNMSESESEQEGAGKEGIEWIMNLPDVPMKLPPHVELQRTRVECKADAPIHTDTIQYSGAFASMGVDNSLRLDYFRNNFKIEVIDLREDDIE
Query: FDMIGIDPALANAFRRILIAEVPTMAIEKVLVANNTSIIQDEVLAHRLGLIPIHADPRLFEYSDKDTPNEKNTVVFRLHARCERGKPRLTVTSKALTWLP
FDMIGIDP+LANAFRRILIAEVPTMAIEKVLVANNTSI+QDEVLAHRLGLIPI DPRLFEYSDKDTPNEKNT+VFRLH RCERGKPRLT TSKALTWLP
Subjt: FDMIGIDPALANAFRRILIAEVPTMAIEKVLVANNTSIIQDEVLAHRLGLIPIHADPRLFEYSDKDTPNEKNTVVFRLHARCERGKPRLTVTSKALTWLP
Query: NGSEFPLVSDKSVPNSKPKTYTSFSCSQDTLPEFSNNPIGPKESDIIIARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELAD
NGSEFPLVSDKSV N+KPKTYTSFSCSQDTLPEF+NNPIGPK+ DII+ARL GQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLE+IEDELA+
Subjt: NGSEFPLVSDKSVPNSKPKTYTSFSCSQDTLPEFSNNPIGPKESDIIIARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELAD
Query: ELKKKCPVNVFDIEDIANGKKRATVARPRACTLCRECIRGEAWEKRVSLHRVKDHFISHFE
ELK KCPVNVFDIEDIANGKKRATVARPRACTLCRECIRGEAWEKRVSL RVKDHFI E
Subjt: ELKKKCPVNVFDIEDIANGKKRATVARPRACTLCRECIRGEAWEKRVSLHRVKDHFISHFE
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| A0A6J1L269 DNA-directed RNA polymerases I and III subunit RPAC1 | 1.2e-188 | 90.3 | Show/hide |
Query: MSAKDKNLYNMSESESEQEGAGKEGIEWIMNLPDVPMKLPPHVELQRTRVECKADAPIHTDTIQYSGAFASMGVDNSLRLDYFRNNFKIEVIDLREDDIE
MS +DKNL++MSES+SEQE GKEGIEWIMNLPDVPMKLPPHVELQRTRVECKADAPIHTDTIQYSGA+AS+G+DNSLRLD FR NFKIEVIDL+EDD+E
Subjt: MSAKDKNLYNMSESESEQEGAGKEGIEWIMNLPDVPMKLPPHVELQRTRVECKADAPIHTDTIQYSGAFASMGVDNSLRLDYFRNNFKIEVIDLREDDIE
Query: FDMIGIDPALANAFRRILIAEVPTMAIEKVLVANNTSIIQDEVLAHRLGLIPIHADPRLFEYSDKDTPNEKNTVVFRLHARCERGKPRLTVTSKALTWLP
FDMIGIDP+LANAFRRILIAEVPTMAIEKVLVANNTSI+QDEVLAHRLGLIPI DPRLFEYSDKDTPNEKNT+VFRLH RCERGKPRLT TS+ALTWLP
Subjt: FDMIGIDPALANAFRRILIAEVPTMAIEKVLVANNTSIIQDEVLAHRLGLIPIHADPRLFEYSDKDTPNEKNTVVFRLHARCERGKPRLTVTSKALTWLP
Query: NGSEFPLVSDKSVPNSKPKTYTSFSCSQDTLPEFSNNPIGPKESDIIIARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELAD
NGSEFPLVSDKSV NSKPKTYTSFSCSQDTLPEF+NNPIGPK+ DII+ARL GQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELA+
Subjt: NGSEFPLVSDKSVPNSKPKTYTSFSCSQDTLPEFSNNPIGPKESDIIIARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELAD
Query: ELKKKCPVNVFDIEDIANGKKRATVARPRACTLCRECIRGEAWEKRVSLHRVKDHFISHFE
ELK KCPVNVFDIEDIANGKKRATVARPRACTLCRECIRGEAWEKRVSL RVKDHFI E
Subjt: ELKKKCPVNVFDIEDIANGKKRATVARPRACTLCRECIRGEAWEKRVSLHRVKDHFISHFE
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| O15160 DNA-directed RNA polymerases I and III subunit RPAC1 | 3.2e-66 | 44.31 | Show/hide |
Query: VELQRTRVECKADAPIHTDTIQYSGAFASMGVDNSLRLDYFRNNFKIEVIDLREDDIEFDMIGIDPALANAFRRILIAEVPTMAIEKVLVANNTSIIQDE
VE R+RV + T + G ++ G D++ D F NF+++V+ + E+ +EFDM+GID A+ANAFRRIL+AEVPTMA+EKVLV NNTSI+QDE
Subjt: VELQRTRVECKADAPIHTDTIQYSGAFASMGVDNSLRLDYFRNNFKIEVIDLREDDIEFDMIGIDPALANAFRRILIAEVPTMAIEKVLVANNTSIIQDE
Query: VLAHRLGLIPIHADPRLFEYSDK--DTPNEKNTVVFRLHARCERGKPRL-------------TVTSKALTWLPNGSEFPLVSDKSVPNSKPKTYTSFSCS
+LAHRLGLIPIHADPRLFEY ++ + E +T+ FRL RC R V ++ +TW+P G++ L
Subjt: VLAHRLGLIPIHADPRLFEYSDK--DTPNEKNTVVFRLHARCERGKPRL-------------TVTSKALTWLPNGSEFPLVSDKSVPNSKPKTYTSFSCS
Query: QDTLPEFSNNPIGPKESDIIIARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELADELKKKCPVNVFDIEDIANGKKRATVAR
F I P DI+IA+L PGQEI+L H VKG+GK HAK+SPVATA YR+LP++ LLE +E E A+EL + V +++++ GKK A VA
Subjt: QDTLPEFSNNPIGPKESDIIIARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELADELKKKCPVNVFDIEDIANGKKRATVAR
Query: PRACTLCRECIRGEAWEKRVSLHRVKDHFISHFE
PR T RE R E +K V L RV+DH+I E
Subjt: PRACTLCRECIRGEAWEKRVSLHRVKDHFISHFE
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| O94616 DNA-directed RNA polymerases I and III subunit RPAC1 | 2.1e-57 | 39.05 | Show/hide |
Query: VELQRTRVECKADAPIHTDTIQYSGAFASMGVDNSLRLDYFRNNFKIEVIDLREDDIEFDMIGIDPALANAFRRILIAEVPTMAIEKVLVANNTSIIQDE
V+ RT + +D ++ + G + DN LD F+ N K+ + L ++ + F++ GID ++ANAFRRILIAE+PT+A E V + NNTSIIQDE
Subjt: VELQRTRVECKADAPIHTDTIQYSGAFASMGVDNSLRLDYFRNNFKIEVIDLREDDIEFDMIGIDPALANAFRRILIAEVPTMAIEKVLVANNTSIIQDE
Query: VLAHRLGLIPIHADPRLFEYSDKDTPNEK------NTVVFRLHARCERGK---------PRLTVTSKA----LTWLPNGSEFPLVSDKSVPNSKPKTYTS
VL+HR+GL+PI ADP +F++ P ++ +TVVF L+ +CE K RL V S+ L W P G +
Subjt: VLAHRLGLIPIHADPRLFEYSDKDTPNEK------NTVVFRLHARCERGK---------PRLTVTSKA----LTWLPNGSEFPLVSDKSVPNSKPKTYTS
Query: FSCSQDTLPEFSNNPIGPKESDIIIARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELADELKKKCPVNVFDIEDIANGKKRA
F++NPI DI++A+L PGQEI+LEAHA+ G+G+ HAK+SPVATA YR+LP + +L IE E A + +K P V ++E+ +GKK+A
Subjt: FSCSQDTLPEFSNNPIGPKESDIIIARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELADELKKKCPVNVFDIEDIANGKKRA
Query: TVARPRACTLCRECIRGEAWEKRVSLHRVKDHFISHFE
VA R T+ REC+R + +V L RV+DH++ E
Subjt: TVARPRACTLCRECIRGEAWEKRVSLHRVKDHFISHFE
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| P52432 DNA-directed RNA polymerases I and III subunit RPAC1 | 4.6e-65 | 46.06 | Show/hide |
Query: VELQRTRVECKADAPIHTDTIQYSGAFASMGVDNSLRLDYFRNNFKIEVIDLREDDIEFDMIGIDPALANAFRRILIAEVPTMAIEKVLVANNTSIIQDE
VE RTRV + T + G +A G D++ + F NF+++V+ + ED +EFDM+GID A+ANAFRRIL+AEVPTMA+EKVLV NNTSI+QDE
Subjt: VELQRTRVECKADAPIHTDTIQYSGAFASMGVDNSLRLDYFRNNFKIEVIDLREDDIEFDMIGIDPALANAFRRILIAEVPTMAIEKVLVANNTSIIQDE
Query: VLAHRLGLIPIHADPRLFEYSD--KDTPNEKNTVVFRLHARCERGKPRLTVTSKALTWLPNGSEFPLVSDKSVPN---------SKPKTYTSFSCSQDTL
+LAHRLGLIPI ADPRLFEY + ++ E +T+ FRL RC R PN ++ D S PN ++ T+ D
Subjt: VLAHRLGLIPIHADPRLFEYSD--KDTPNEKNTVVFRLHARCERGKPRLTVTSKALTWLPNGSEFPLVSDKSVPN---------SKPKTYTSFSCSQDTL
Query: PEFSNNPIGPKESDIIIARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELADELKKKCPVNVFDIEDIANGKKRATVARPRAC
PE I P DI+IA+L PGQEI+L H VKG+GK HAK+SPVATA YR+LP + LLE +E E A+EL + V ++E++ GKK A VA R
Subjt: PEFSNNPIGPKESDIIIARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELADELKKKCPVNVFDIEDIANGKKRATVARPRAC
Query: TLCRECIRGEAWEKRVSLHRVKDHFISHFE
T RE R E +K V L RV+DH+I E
Subjt: TLCRECIRGEAWEKRVSLHRVKDHFISHFE
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| Q32L22 DNA-directed RNA polymerases I and III subunit RPAC1 | 6.4e-67 | 45.21 | Show/hide |
Query: VELQRTRVECKADAPIHTDTIQYSGAFASMGVDNSLRLDYFRNNFKIEVIDLREDDIEFDMIGIDPALANAFRRILIAEVPTMAIEKVLVANNTSIIQDE
VE RTRV + T + G ++ G D++ D F NF+++V+ + E+ +EFDM+GID A+ANAFRRIL+AEVPTMA+EKVLV NNTSI+QDE
Subjt: VELQRTRVECKADAPIHTDTIQYSGAFASMGVDNSLRLDYFRNNFKIEVIDLREDDIEFDMIGIDPALANAFRRILIAEVPTMAIEKVLVANNTSIIQDE
Query: VLAHRLGLIPIHADPRLFEYSDK--DTPNEKNTVVFRLHARCERGKPRL-------------TVTSKALTWLPNGSEFPLVSDKSVPNSKPKTYTSFSCS
+LAHRLGLIPIHADPRLFEY ++ + E +T+ FRL RC R V ++ +TW+P G++ L
Subjt: VLAHRLGLIPIHADPRLFEYSDK--DTPNEKNTVVFRLHARCERGKPRL-------------TVTSKALTWLPNGSEFPLVSDKSVPNSKPKTYTSFSCS
Query: QDTLPEFSNNPIGPKESDIIIARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELADELKKKCPVNVFDIEDIANGKKRATVAR
F I P DI+IA+L PGQEI+L H VKG+GK HAK+SPVATA YR+LP++ LLE +E E A+EL + V ++++I GKK A VA
Subjt: QDTLPEFSNNPIGPKESDIIIARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELADELKKKCPVNVFDIEDIANGKKRATVAR
Query: PRACTLCRECIRGEAWEKRVSLHRVKDHFISHFE
PR T RE R E +K V L RV+DHFI E
Subjt: PRACTLCRECIRGEAWEKRVSLHRVKDHFISHFE
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| Q54SN4 DNA-directed RNA polymerases I and III subunit rpac1 | 9.6e-63 | 41.21 | Show/hide |
Query: PHVELQRTRVECKADAPIHTDTIQYSGAFASMGVDNSLRLDYFRNNFKIEVIDLREDDIEFDMIGIDPALANAFRRILIAEVPTMAIEKVLVANNTSIIQ
P++E +RT+V + YSGA+ S+G DNS L+ F+ NFKI ++ +++ F+MIGID +ANA RRI+I+E+PTMAIEKV + NNTSI+Q
Subjt: PHVELQRTRVECKADAPIHTDTIQYSGAFASMGVDNSLRLDYFRNNFKIEVIDLREDDIEFDMIGIDPALANAFRRILIAEVPTMAIEKVLVANNTSIIQ
Query: DEVLAHRLGLIPIHADPRLFEYSDKDTPNE----KNTVVFRLHARCER----GK-PRLTVTSKALTWLPNGSEFPLVSDKSVPNSKPKTYTSFSCSQDTL
DEVLAHRLG+IPI DPR F + PN+ ++T++F+L +CE+ GK T SK L W+P + ++
Subjt: DEVLAHRLGLIPIHADPRLFEYSDKDTPNE----KNTVVFRLHARCER----GK-PRLTVTSKALTWLPNGSEFPLVSDKSVPNSKPKTYTSFSCSQDTL
Query: PEFSNNPIGPKESDIIIARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELADELKKKCPVNVFDIEDIANGKKRATVARPRAC
P + P P E DI I +L PGQ I+++ + K +G+ H KWSPV TA YR+ P + + + I+ + A++L +KCP VFDIED + ARP C
Subjt: PEFSNNPIGPKESDIIIARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELADELKKKCPVNVFDIEDIANGKKRATVARPRAC
Query: TLCRECIRGEAWEKRVSLHRVKDHFISHFE
T+CRECIR +E+ V + RV+DHFI E
Subjt: TLCRECIRGEAWEKRVSLHRVKDHFISHFE
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| Arabidopsis top hits | e value | %identity | Alignment |
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| AT1G60620.1 RNA polymerase I subunit 43 | 7.4e-127 | 67.16 | Show/hide |
Query: IMNLPDVPMKLPPHVELQRTRVECKADAPIHTDTIQYSGAFASMGVDNSLRLDYFRNNFKIEVIDLREDDIEFDMIGIDPALANAFRRILIAEVPTMAIE
I +LPDVP LPPH+ELQRTRV CK D+ IH I +SGA++SMGVDNS+RL+ F +FK++VI L E D+ FDMIG+ +ANAFRRIL+AE+P+MAIE
Subjt: IMNLPDVPMKLPPHVELQRTRVECKADAPIHTDTIQYSGAFASMGVDNSLRLDYFRNNFKIEVIDLREDDIEFDMIGIDPALANAFRRILIAEVPTMAIE
Query: KVLVANNTSIIQDEVLAHRLGLIPIHADPRLFEY-SDKDTPNEKNTVVFRLHARCERGKPRLTVTSKALTWLPNGSEFPLVSDKSVPNSKPKTYTSFSCS
KV VANNTS+IQDEVLAHRLGLIPI ADPRLFEY S+ D PNEKNT+VF+LH +C +G PR V + L WLPNGSE L+ + + PKTYTSF+ S
Subjt: KVLVANNTSIIQDEVLAHRLGLIPIHADPRLFEY-SDKDTPNEKNTVVFRLHARCERGKPRLTVTSKALTWLPNGSEFPLVSDKSVPNSKPKTYTSFSCS
Query: QDTLPEFSNNPIGPKESDIIIARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELADELKKKCPVNVFDIEDIANGKKRATVAR
QD+ PEF+ NPI P DI+IA+LGPGQEIELEAHAVKG+GKTHAKWSPVATAWYRMLPEVVLL+E E + A+EL K CP VFDIED+ G+KRATVAR
Subjt: QDTLPEFSNNPIGPKESDIIIARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELADELKKKCPVNVFDIEDIANGKKRATVAR
Query: PRACTLCRECIR-GEAWEKRVSLHRVKDHFISHFE
PR C+LCRECIR G WE +V L RVK+HFI E
Subjt: PRACTLCRECIR-GEAWEKRVSLHRVKDHFISHFE
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| AT1G60850.1 DNA-directed RNA polymerase family protein | 2.0e-119 | 64.18 | Show/hide |
Query: IMNLPDVPMKLPPHVELQRTRVECKADAPIHTDTIQYSGAF-ASMGVDNSLRLDYFRNNFKIEVIDLREDDIEFDMIGIDPALANAFRRILIAEVPTMAI
I +LPDVP LPPH++ Q+TRV K +AP HT + YSG + +S D++++L F +NFK++V+ L + D+EFDMIGID A ANAFRRILIAEVP+MAI
Subjt: IMNLPDVPMKLPPHVELQRTRVECKADAPIHTDTIQYSGAF-ASMGVDNSLRLDYFRNNFKIEVIDLREDDIEFDMIGIDPALANAFRRILIAEVPTMAI
Query: EKVLVANNTSIIQDEVLAHRLGLIPIHADPRLFEY-SDKDTPNEKNTVVFRLHARCERGKPRLTVTSKALTWLPNGSEFPLVSDKSVPNSKPKTYTSFSC
EKVL+A NTS+I DEVLAHR+GLIPI ADPRLFEY S+ D NEKNT+VF+LH +C + +PRL V + L WLPNGSE L+ + SKPKTYTSFSC
Subjt: EKVLVANNTSIIQDEVLAHRLGLIPIHADPRLFEY-SDKDTPNEKNTVVFRLHARCERGKPRLTVTSKALTWLPNGSEFPLVSDKSVPNSKPKTYTSFSC
Query: SQDTLPEFSNNPIGPKESDIIIARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELADELKKKCPVNVFDIEDIANGKKRATVA
SQD+LPEF+NNPI P + DI+IA+L PGQEIELEAHAVKG+GKTHAKWSPV TAWYRM PEVVL E+EDELA+ L CP NVFDIED+ GKKRATVA
Subjt: SQDTLPEFSNNPIGPKESDIIIARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELADELKKKCPVNVFDIEDIANGKKRATVA
Query: RPRACTLCRECIRGEAWEKRVSLHRVKDHFISHFE
+PR CTLC+EC+R + V L VK+HFI + E
Subjt: RPRACTLCRECIRGEAWEKRVSLHRVKDHFISHFE
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| AT1G60850.2 DNA-directed RNA polymerase family protein | 2.0e-119 | 64.18 | Show/hide |
Query: IMNLPDVPMKLPPHVELQRTRVECKADAPIHTDTIQYSGAF-ASMGVDNSLRLDYFRNNFKIEVIDLREDDIEFDMIGIDPALANAFRRILIAEVPTMAI
I +LPDVP LPPH++ Q+TRV K +AP HT + YSG + +S D++++L F +NFK++V+ L + D+EFDMIGID A ANAFRRILIAEVP+MAI
Subjt: IMNLPDVPMKLPPHVELQRTRVECKADAPIHTDTIQYSGAF-ASMGVDNSLRLDYFRNNFKIEVIDLREDDIEFDMIGIDPALANAFRRILIAEVPTMAI
Query: EKVLVANNTSIIQDEVLAHRLGLIPIHADPRLFEY-SDKDTPNEKNTVVFRLHARCERGKPRLTVTSKALTWLPNGSEFPLVSDKSVPNSKPKTYTSFSC
EKVL+A NTS+I DEVLAHR+GLIPI ADPRLFEY S+ D NEKNT+VF+LH +C + +PRL V + L WLPNGSE L+ + SKPKTYTSFSC
Subjt: EKVLVANNTSIIQDEVLAHRLGLIPIHADPRLFEY-SDKDTPNEKNTVVFRLHARCERGKPRLTVTSKALTWLPNGSEFPLVSDKSVPNSKPKTYTSFSC
Query: SQDTLPEFSNNPIGPKESDIIIARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELADELKKKCPVNVFDIEDIANGKKRATVA
SQD+LPEF+NNPI P + DI+IA+L PGQEIELEAHAVKG+GKTHAKWSPV TAWYRM PEVVL E+EDELA+ L CP NVFDIED+ GKKRATVA
Subjt: SQDTLPEFSNNPIGPKESDIIIARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELADELKKKCPVNVFDIEDIANGKKRATVA
Query: RPRACTLCRECIRGEAWEKRVSLHRVKDHFISHFE
+PR CTLC+EC+R + V L VK+HFI + E
Subjt: RPRACTLCRECIRGEAWEKRVSLHRVKDHFISHFE
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| AT1G60850.3 DNA-directed RNA polymerase family protein | 4.8e-94 | 65.65 | Show/hide |
Query: IMNLPDVPMKLPPHVELQRTRVECKADAPIHTDTIQYSGAF-ASMGVDNSLRLDYFRNNFKIEVIDLREDDIEFDMIGIDPALANAFRRILIAEVPTMAI
I +LPDVP LPPH++ Q+TRV K +AP HT + YSG + +S D++++L F +NFK++V+ L + D+EFDMIGID A ANAFRRILIAEVP+MAI
Subjt: IMNLPDVPMKLPPHVELQRTRVECKADAPIHTDTIQYSGAF-ASMGVDNSLRLDYFRNNFKIEVIDLREDDIEFDMIGIDPALANAFRRILIAEVPTMAI
Query: EKVLVANNTSIIQDEVLAHRLGLIPIHADPRLFEY-SDKDTPNEKNTVVFRLHARCERGKPRLTVTSKALTWLPNGSEFPLVSDKSVPNSKPKTYTSFSC
EKVL+A NTS+I DEVLAHR+GLIPI ADPRLFEY S+ D NEKNT+VF+LH +C + +PRL V + L WLPNGSE L+ + SKPKTYTSFSC
Subjt: EKVLVANNTSIIQDEVLAHRLGLIPIHADPRLFEY-SDKDTPNEKNTVVFRLHARCERGKPRLTVTSKALTWLPNGSEFPLVSDKSVPNSKPKTYTSFSC
Query: SQDTLPEFSNNPIGPKESDIIIARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEV
SQD+LPEF+NNPI P + DI+IA+L PGQEIELEAHAVKG+GKTHAKWSPV TAWYRM PEV
Subjt: SQDTLPEFSNNPIGPKESDIIIARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEV
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| AT2G15430.1 DNA-directed RNA polymerase family protein | 4.2e-29 | 33.46 | Show/hide |
Query: KIEVIDLREDDIEFDMIGIDPALANAFRRILIAEVPTMAIEKVLVANNTSIIQDEVLAHRLGLIPIHAD-------PRLFEYSDKDTPNEKNTVVFRLHA
KI++ +L++D +F++ D ++ANA RR++I+EVPT+AI+ V + N+S++ DE +AHRLGLIP+ ++ R + D D E +V FRL +
Subjt: KIEVIDLREDDIEFDMIGIDPALANAFRRILIAEVPTMAIEKVLVANNTSIIQDEVLAHRLGLIPIHAD-------PRLFEYSDKDTPNEKNTVVFRLHA
Query: RCERGKPRLTVTSKALTWLPNGSEFPLVSDKSVPNSKPKTYTSFSCSQDTLPEFSNNPIGPKESDIIIARLGPGQEIELEAHAVKGMGKTHAKWSPVATA
+C + L VTS+ L + P P +T S D+ + III +L GQE++L A A KG+GK HAKWSP AT
Subjt: RCERGKPRLTVTSKALTWLPNGSEFPLVSDKSVPNSKPKTYTSFSCSQDTLPEFSNNPIGPKESDIIIARLGPGQEIELEAHAVKGMGKTHAKWSPVATA
Query: WYRMLPEVVLLEEIEDELADELK----KKCPVNVFDIEDIANGKKRATVARPRACTLCRECIR
+ P++++ E++ D L+DE K + P VF ++ + ++ V P A T E I+
Subjt: WYRMLPEVVLLEEIEDELADELK----KKCPVNVFDIEDIANGKKRATVARPRACTLCRECIR
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