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Lag0017937 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0017937
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr5:11942126..11942665
RNA-Seq ExpressionLag0017937
SyntenyLag0017937
Gene Ontology termsNA
InterPro domainsIPR025558 - Domain of unknown function DUF4283


Homology Show/hide homology
GenBank top hitse value%identityAlignment
PQQ10307.1 uncharacterized protein Pyn_17609 [Prunus yedoensis var. nudiflora]6.2e-1933.11Show/hide
Query:  ENMLENWERFSLTTEEETTEIDVDRQVAIVTRQSLGFSLIGKLFAPRFISGDVMRRTFKSAWNIPTGLMVEKMGPNLFLFSLRSEADQNRVLRQEPWLFD
        E ++ + E+  + TE+E   I V++       + L  SL+GK+F     + +  ++T    WN    ++V+ +G NLFLF   +E D+ +VLR  PW FD
Subjt:  ENMLENWERFSLTTEEETTEIDVDRQVAIVTRQSLGFSLIGKLFAPRFISGDVMRRTFKSAWNIPTGLMVEKMGPNLFLFSLRSEADQNRVLRQEPWLFD

Query:  KYLLALSKPIHMVKPTAMEFKYATFWVHFCDLPMDLYNQSMAESLGNAIGR
        K L+ L  P   V P+ M  KYA FW+   ++P+     +M   +GN++GR
Subjt:  KYLLALSKPIHMVKPTAMEFKYATFWVHFCDLPMDLYNQSMAESLGNAIGR

XP_022132681.1 uncharacterized protein LOC111005481 [Momordica charantia]3.3e-2841.67Show/hide
Query:  MAFENMLENWERFSLTTEEETTEIDVDRQVAIVTRQSLGFSLIGKLFAPRFISGDVMRRTFKSAWNIP-TGLMVEKMGPNLFLFSLRSEADQNRVLRQEP
        MA  N+LE W+ F LT+EE+   +D+D      T + L  SLI KL + R IS  V++ T K AW +      V+ +G N+FLF+    +D+NR+LR  P
Subjt:  MAFENMLENWERFSLTTEEETTEIDVDRQVAIVTRQSLGFSLIGKLFAPRFISGDVMRRTFKSAWNIP-TGLMVEKMGPNLFLFSLRSEADQNRVLRQEP

Query:  WLFDKYLLALSKPIHMVKPTAMEFKYATFWVHFCDLPMDLYNQSMAESLGNAIGRF
        W FD+ L+ +  P+ + KP  M+F+  + WVHF DL +   N++MA  LGNAIG F
Subjt:  WLFDKYLLALSKPIHMVKPTAMEFKYATFWVHFCDLPMDLYNQSMAESLGNAIGRF

XP_022156185.1 uncharacterized protein LOC111023135 [Momordica charantia]1.7e-3245.81Show/hide
Query:  MAFENMLENWERFSLTTEEETTEIDVDRQVAIVTRQSLGFSLIGKLFAPRFISGDVMRRTFKSAWNIPTGLMVEKMGPNLFLFSLRSEADQNRVLRQEPW
        M  EN+L +W++F LT+EE+   +DVD     +  Q L +SL+GKL A R IS DV+ R    AW +   L VE +G NLFLF    E D NRV++  PW
Subjt:  MAFENMLENWERFSLTTEEETTEIDVDRQVAIVTRQSLGFSLIGKLFAPRFISGDVMRRTFKSAWNIPTGLMVEKMGPNLFLFSLRSEADQNRVLRQEPW

Query:  LFDKYLLALSKPIHMVKPTAMEFKYATFWVHFCDLPMDLYNQSMAESLGNAIGRF
         FDK L+ L KP      + +EF    FW+H  DLPM   N++MA  LGNAIG F
Subjt:  LFDKYLLALSKPIHMVKPTAMEFKYATFWVHFCDLPMDLYNQSMAESLGNAIGRF

XP_022158377.1 uncharacterized protein LOC111024874 [Momordica charantia]6.2e-2740.38Show/hide
Query:  MAFENMLENWERFSLTTEEETTEIDVDRQVAIVTRQSLGFSLIGKLFAPRFISGDVMRRTFKSAWNIPTGLM-VEKMGPNLFLFSLRSEADQNRVLRQEP
        MA  ++LE W+ F LT+EEE T IDVD      T   L   L+GKLF  R I+  VM+ T ++AW +      V+ +G NLFLFS     D+N++ +  P
Subjt:  MAFENMLENWERFSLTTEEETTEIDVDRQVAIVTRQSLGFSLIGKLFAPRFISGDVMRRTFKSAWNIPTGLM-VEKMGPNLFLFSLRSEADQNRVLRQEP

Query:  WLFDKYLLALSKPIHMVKPTAMEFKYATFWVHFCDLPMDLYNQSMAESLGNAIGRF
        W FD+ L+ ++KP+ ++ P+ ++F     WV F DLP+    + MA  LGNA+G F
Subjt:  WLFDKYLLALSKPIHMVKPTAMEFKYATFWVHFCDLPMDLYNQSMAESLGNAIGRF

XP_028122006.1 uncharacterized protein LOC114319195 [Camellia sinensis]3.1e-1833.55Show/hide
Query:  ENMLENWERFSLTTEEETTEIDVDRQVAIVTRQSLGFSLIGKLFAPRFISGDVMRRTFKSAWNIPTGLMVEKMGPNLFLFSLRSEADQNRVLRQEPWLFD
        +++L+     SLT+EE+   + +  +   +        L+GKL   R  + + M+ T  S W    G+ V  +G NLF+F      D+ RVL   PW FD
Subjt:  ENMLENWERFSLTTEEETTEIDVDRQVAIVTRQSLGFSLIGKLFAPRFISGDVMRRTFKSAWNIPTGLMVEKMGPNLFLFSLRSEADQNRVLRQEPWLFD

Query:  KYLLALSKPIHMVKPTAMEFKYATFWVHFCDLPMDLYNQSMAESLGNAIGRF
        K+LL L +    V+P+ ++     FWVH C+LP+ L N+ + E +GNA+G+F
Subjt:  KYLLALSKPIHMVKPTAMEFKYATFWVHFCDLPMDLYNQSMAESLGNAIGRF

TrEMBL top hitse value%identityAlignment
A0A2N9FMJ0 Reverse transcriptase domain-containing protein1.9e-1836.67Show/hide
Query:  ENMLENWERFSLTTEEETTEIDVDRQVAIVTRQSLGFSLIGKLFAPRFISGDVMRRTFKSAWNIPTGLMVEKMGPNLFLFSLRSEADQNRVLRQEPWLFD
        E +   W+RFSL TE E  + ++D      T     F+L  K F  R I+ + + RTFK  W    G M   MG N+ LF    +AD  RVL  EPW +D
Subjt:  ENMLENWERFSLTTEEETTEIDVDRQVAIVTRQSLGFSLIGKLFAPRFISGDVMRRTFKSAWNIPTGLMVEKMGPNLFLFSLRSEADQNRVLRQEPWLFD

Query:  KYLLALSKPIHMVKPTAMEFKYATFWVHFCDLPMDLYNQSMAESLGNAIG
        KYL+A  +    ++  ++ F++A FWV   +LP+    + +AE+LG+ IG
Subjt:  KYLLALSKPIHMVKPTAMEFKYATFWVHFCDLPMDLYNQSMAESLGNAIG

A0A314YVX1 CCHC-type domain-containing protein3.0e-1933.11Show/hide
Query:  ENMLENWERFSLTTEEETTEIDVDRQVAIVTRQSLGFSLIGKLFAPRFISGDVMRRTFKSAWNIPTGLMVEKMGPNLFLFSLRSEADQNRVLRQEPWLFD
        E ++ + E+  + TE+E   I V++       + L  SL+GK+F     + +  ++T    WN    ++V+ +G NLFLF   +E D+ +VLR  PW FD
Subjt:  ENMLENWERFSLTTEEETTEIDVDRQVAIVTRQSLGFSLIGKLFAPRFISGDVMRRTFKSAWNIPTGLMVEKMGPNLFLFSLRSEADQNRVLRQEPWLFD

Query:  KYLLALSKPIHMVKPTAMEFKYATFWVHFCDLPMDLYNQSMAESLGNAIGR
        K L+ L  P   V P+ M  KYA FW+   ++P+     +M   +GN++GR
Subjt:  KYLLALSKPIHMVKPTAMEFKYATFWVHFCDLPMDLYNQSMAESLGNAIGR

A0A6J1BSZ1 uncharacterized protein LOC1110054811.6e-2841.67Show/hide
Query:  MAFENMLENWERFSLTTEEETTEIDVDRQVAIVTRQSLGFSLIGKLFAPRFISGDVMRRTFKSAWNIP-TGLMVEKMGPNLFLFSLRSEADQNRVLRQEP
        MA  N+LE W+ F LT+EE+   +D+D      T + L  SLI KL + R IS  V++ T K AW +      V+ +G N+FLF+    +D+NR+LR  P
Subjt:  MAFENMLENWERFSLTTEEETTEIDVDRQVAIVTRQSLGFSLIGKLFAPRFISGDVMRRTFKSAWNIP-TGLMVEKMGPNLFLFSLRSEADQNRVLRQEP

Query:  WLFDKYLLALSKPIHMVKPTAMEFKYATFWVHFCDLPMDLYNQSMAESLGNAIGRF
        W FD+ L+ +  P+ + KP  M+F+  + WVHF DL +   N++MA  LGNAIG F
Subjt:  WLFDKYLLALSKPIHMVKPTAMEFKYATFWVHFCDLPMDLYNQSMAESLGNAIGRF

A0A6J1DU55 uncharacterized protein LOC1110231358.1e-3345.81Show/hide
Query:  MAFENMLENWERFSLTTEEETTEIDVDRQVAIVTRQSLGFSLIGKLFAPRFISGDVMRRTFKSAWNIPTGLMVEKMGPNLFLFSLRSEADQNRVLRQEPW
        M  EN+L +W++F LT+EE+   +DVD     +  Q L +SL+GKL A R IS DV+ R    AW +   L VE +G NLFLF    E D NRV++  PW
Subjt:  MAFENMLENWERFSLTTEEETTEIDVDRQVAIVTRQSLGFSLIGKLFAPRFISGDVMRRTFKSAWNIPTGLMVEKMGPNLFLFSLRSEADQNRVLRQEPW

Query:  LFDKYLLALSKPIHMVKPTAMEFKYATFWVHFCDLPMDLYNQSMAESLGNAIGRF
         FDK L+ L KP      + +EF    FW+H  DLPM   N++MA  LGNAIG F
Subjt:  LFDKYLLALSKPIHMVKPTAMEFKYATFWVHFCDLPMDLYNQSMAESLGNAIGRF

A0A6J1DX30 uncharacterized protein LOC1110248743.0e-2740.38Show/hide
Query:  MAFENMLENWERFSLTTEEETTEIDVDRQVAIVTRQSLGFSLIGKLFAPRFISGDVMRRTFKSAWNIPTGLM-VEKMGPNLFLFSLRSEADQNRVLRQEP
        MA  ++LE W+ F LT+EEE T IDVD      T   L   L+GKLF  R I+  VM+ T ++AW +      V+ +G NLFLFS     D+N++ +  P
Subjt:  MAFENMLENWERFSLTTEEETTEIDVDRQVAIVTRQSLGFSLIGKLFAPRFISGDVMRRTFKSAWNIPTGLM-VEKMGPNLFLFSLRSEADQNRVLRQEP

Query:  WLFDKYLLALSKPIHMVKPTAMEFKYATFWVHFCDLPMDLYNQSMAESLGNAIGRF
        W FD+ L+ ++KP+ ++ P+ ++F     WV F DLP+    + MA  LGNA+G F
Subjt:  WLFDKYLLALSKPIHMVKPTAMEFKYATFWVHFCDLPMDLYNQSMAESLGNAIGRF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGGTTGTACTGTTCATCACCAAAGGATCTTCCAGTATTCTTTTTCCCTGCAAACACATTAGTCCTCTCATGGCTTTTGAAAATATGCTGGAAAATTGGGAGAGGTT
TAGCCTCACAACGGAAGAAGAAACTACTGAAATTGATGTGGATCGACAAGTGGCCATAGTTACTCGTCAGTCACTTGGATTCAGCCTCATTGGGAAACTATTTGCTCCTC
GCTTCATCTCTGGTGATGTAATGAGGCGCACTTTTAAGTCCGCTTGGAACATTCCAACTGGCCTTATGGTGGAGAAGATGGGTCCCAATTTGTTCCTTTTTTCTCTGCGA
TCAGAAGCTGACCAGAATCGGGTACTTCGCCAGGAGCCATGGCTCTTCGATAAATACCTTCTCGCTCTATCGAAGCCCATTCACATGGTGAAACCGACAGCTATGGAATT
TAAATATGCGACGTTCTGGGTTCACTTTTGTGATTTACCGATGGACCTTTACAACCAATCGATGGCGGAAAGCTTGGGTAATGCCATTGGACGTTTCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGTGGTTGTACTGTTCATCACCAAAGGATCTTCCAGTATTCTTTTTCCCTGCAAACACATTAGTCCTCTCATGGCTTTTGAAAATATGCTGGAAAATTGGGAGAGGTT
TAGCCTCACAACGGAAGAAGAAACTACTGAAATTGATGTGGATCGACAAGTGGCCATAGTTACTCGTCAGTCACTTGGATTCAGCCTCATTGGGAAACTATTTGCTCCTC
GCTTCATCTCTGGTGATGTAATGAGGCGCACTTTTAAGTCCGCTTGGAACATTCCAACTGGCCTTATGGTGGAGAAGATGGGTCCCAATTTGTTCCTTTTTTCTCTGCGA
TCAGAAGCTGACCAGAATCGGGTACTTCGCCAGGAGCCATGGCTCTTCGATAAATACCTTCTCGCTCTATCGAAGCCCATTCACATGGTGAAACCGACAGCTATGGAATT
TAAATATGCGACGTTCTGGGTTCACTTTTGTGATTTACCGATGGACCTTTACAACCAATCGATGGCGGAAAGCTTGGGTAATGCCATTGGACGTTTCTAA
Protein sequenceShow/hide protein sequence
MVVVLFITKGSSSILFPCKHISPLMAFENMLENWERFSLTTEEETTEIDVDRQVAIVTRQSLGFSLIGKLFAPRFISGDVMRRTFKSAWNIPTGLMVEKMGPNLFLFSLR
SEADQNRVLRQEPWLFDKYLLALSKPIHMVKPTAMEFKYATFWVHFCDLPMDLYNQSMAESLGNAIGRF