; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0017953 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0017953
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr5:12260033..12260476
RNA-Seq ExpressionLag0017953
SyntenyLag0017953
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022150918.1 uncharacterized protein LOC111018954 [Momordica charantia]3.2e-2947.22Show/hide
Query:  KCKGGMSFRDLQRFNQALLAKISWRILELPNSLMSKILRGRYFQDGDFLKAKAGNNPSMMWRSIVWGRNLFKKGYRWKIGIDNRIIINEDPWIEDPDGRA
        KC+GGM FRDL+ FN+ALLAK  WRIL  PNS++S++L+GRYF+D  F++AK   NPS +WRSI+WGR+L KKG RW+IG  + + I  D W+ +     
Subjt:  KCKGGMSFRDLQRFNQALLAKISWRILELPNSLMSKILRGRYFQDGDFLKAKAGNNPSMMWRSIVWGRNLFKKGYRWKIGIDNRIIINEDPWIEDPDGRA

Query:  SLRVENDFKGTRVRALL-KEDGSWNERLVREAVDKSEADLILNI
         L        +RV +L+  E+G W   +VR+     EA  IL+I
Subjt:  SLRVENDFKGTRVRALL-KEDGSWNERLVREAVDKSEADLILNI

XP_022155286.1 uncharacterized protein LOC111022423 [Momordica charantia]2.4e-3249.66Show/hide
Query:  MCTSKCKGGMSFRDLQRFNQALLAKISWRILELPNSLMSKILRGRYFQDGDFLKAKAGNNPSMMWRSIVWGRNLFKKGYRWKIGIDNRIIINEDPWIEDP
        +C  K  GGM FRD+  FNQA+LAK SWRIL  P+SL++K LRG+YF+ G FL+AK G  PS  WRSI+WGR+LFKKGYRWK+G    I ++ DPW+   
Subjt:  MCTSKCKGGMSFRDLQRFNQALLAKISWRILELPNSLMSKILRGRYFQDGDFLKAKAGNNPSMMWRSIVWGRNLFKKGYRWKIGIDNRIIINEDPWIEDP

Query:  DGRASLRVENDFKGTRVRALLKEDGSWNERLVREAVDKSEADLIL
           + +      +   V  L++  G W+E  VRE+   SEAD+IL
Subjt:  DGRASLRVENDFKGTRVRALLKEDGSWNERLVREAVDKSEADLIL

XP_024035599.1 uncharacterized protein LOC112096407 [Citrus clementina]1.3e-2740.97Show/hide
Query:  SKCKGGMSFRDLQRFNQALLAKISWRILELPNSLMSKILRGRYFQDGDFLKAKAGNNPSMMWRSIVWGRNLFKKGYRWKIGIDNRIIINEDPWIEDPDGR
        +K +GG+ FRD+  FNQALLAK  WR+L+ P SL++K+++ RY+++ DFL AK G++PS +WRSI+WGR + +KG RW+IG   +I I    WI  P   
Subjt:  SKCKGGMSFRDLQRFNQALLAKISWRILELPNSLMSKILRGRYFQDGDFLKAKAGNNPSMMWRSIVWGRNLFKKGYRWKIGIDNRIIINEDPWIEDPDGR

Query:  ASLRVENDFKGTRVRALLKEDGSWNERLVREAVDKSEADLILNI
          +   +   G +V  L+  +  WNE ++ ++  + +AD+I +I
Subjt:  ASLRVENDFKGTRVRALLKEDGSWNERLVREAVDKSEADLILNI

XP_024038343.1 uncharacterized protein LOC112097373 [Citrus clementina]1.4e-2943.75Show/hide
Query:  SKCKGGMSFRDLQRFNQALLAKISWRILELPNSLMSKILRGRYFQDGDFLKAKAGNNPSMMWRSIVWGRNLFKKGYRWKIGIDNRIIINEDPWIEDPDGR
        +KC+GGM FRD   FNQAL+AK  WRIL+ P+SL++KIL+ RYFQ  DF+ A+ G+NPS +WRSI+WGR +  KG +W+IG    I+++++ W+  P   
Subjt:  SKCKGGMSFRDLQRFNQALLAKISWRILELPNSLMSKILRGRYFQDGDFLKAKAGNNPSMMWRSIVWGRNLFKKGYRWKIGIDNRIIINEDPWIEDPDGR

Query:  ASLRVENDFKGTRVRALLKEDGSWNERLVREAVDKSEADLILNI
          +   +      V  L+ ED +WNE L+     K +A+ I+ I
Subjt:  ASLRVENDFKGTRVRALLKEDGSWNERLVREAVDKSEADLILNI

XP_024041860.1 uncharacterized protein LOC112098995 [Citrus clementina]1.2e-2843.36Show/hide
Query:  KCKGGMSFRDLQRFNQALLAKISWRILELPNSLMSKILRGRYFQDGDFLKAKAGNNPSMMWRSIVWGRNLFKKGYRWKIGIDNRIIINEDPWIEDPDGRA
        KCKGGM FRD   FNQ L+AK  WRIL+ PNSL+++IL+ RYFQ+ +FL A  G+ PS +WRSI+WGR +  +G RW++G    I++++  W+  P    
Subjt:  KCKGGMSFRDLQRFNQALLAKISWRILELPNSLMSKILRGRYFQDGDFLKAKAGNNPSMMWRSIVWGRNLFKKGYRWKIGIDNRIIINEDPWIEDPDGRA

Query:  SLRVENDFKGTRVRALLKEDGSWNERLVREAVDKSEADLILNI
         +   N      V  L+ ++  WNERL+    DK +A  I+ I
Subjt:  SLRVENDFKGTRVRALLKEDGSWNERLVREAVDKSEADLILNI

TrEMBL top hitse value%identityAlignment
A0A1S8ACU2 Ribonuclease H-like superfamily protein3.4e-2942.18Show/hide
Query:  MCTSKCKGGMSFRDLQRFNQALLAKISWRILELPNSLMSKILRGRYFQDGDFLKAKAGNNPSMMWRSIVWGRNLFKKGYRWKIGIDNRIIINEDPWIEDP
        +C +K +GG+ FRD+  FNQAL+AK SWRI++ P SLM+KIL+ +YF+  DFL+AK G+ PS +WRSI+WGR +   G RW+IG  +R+ I +  WI  P
Subjt:  MCTSKCKGGMSFRDLQRFNQALLAKISWRILELPNSLMSKILRGRYFQDGDFLKAKAGNNPSMMWRSIVWGRNLFKKGYRWKIGIDNRIIINEDPWIEDP

Query:  DGRASLRVENDFKGTRVRALLKEDGSWNERLVREAVDKSEADLILNI
             +          V  L+ E+  W E L+++  +  +A+LI  I
Subjt:  DGRASLRVENDFKGTRVRALLKEDGSWNERLVREAVDKSEADLILNI

A0A2I0A354 Ribonuclease H protein1.1e-2744.83Show/hide
Query:  SKCKGGMSFRDLQRFNQALLAKISWRILELPNSLMSKILRGRYFQDGDFLKAKAGNNPSMMWRSIVWGRNLFKKGYRWKIGIDNRIIINEDPWIEDPDGR
        SK  GGM FR+L  FN+ALLAK  WRI+   NSLM+++L+ +YF + DFL A+A  N S +WRSI+WGR+L K G RW+IG  N + +  DPW+  P   
Subjt:  SKCKGGMSFRDLQRFNQALLAKISWRILELPNSLMSKILRGRYFQDGDFLKAKAGNNPSMMWRSIVWGRNLFKKGYRWKIGIDNRIIINEDPWIEDPDGR

Query:  ASLRVEN-DFKGTRVRALLKEDGSWNERLVREAVDKSEADLILNI
         ++   N +   TR+  LL EDGSWN   +   +   +  LIL +
Subjt:  ASLRVEN-DFKGTRVRALLKEDGSWNERLVREAVDKSEADLILNI

A0A6J1DAR4 uncharacterized protein LOC1110189541.5e-2947.22Show/hide
Query:  KCKGGMSFRDLQRFNQALLAKISWRILELPNSLMSKILRGRYFQDGDFLKAKAGNNPSMMWRSIVWGRNLFKKGYRWKIGIDNRIIINEDPWIEDPDGRA
        KC+GGM FRDL+ FN+ALLAK  WRIL  PNS++S++L+GRYF+D  F++AK   NPS +WRSI+WGR+L KKG RW+IG  + + I  D W+ +     
Subjt:  KCKGGMSFRDLQRFNQALLAKISWRILELPNSLMSKILRGRYFQDGDFLKAKAGNNPSMMWRSIVWGRNLFKKGYRWKIGIDNRIIINEDPWIEDPDGRA

Query:  SLRVENDFKGTRVRALL-KEDGSWNERLVREAVDKSEADLILNI
         L        +RV +L+  E+G W   +VR+     EA  IL+I
Subjt:  SLRVENDFKGTRVRALL-KEDGSWNERLVREAVDKSEADLILNI

A0A6J1DRA0 uncharacterized protein LOC1110224231.1e-3249.66Show/hide
Query:  MCTSKCKGGMSFRDLQRFNQALLAKISWRILELPNSLMSKILRGRYFQDGDFLKAKAGNNPSMMWRSIVWGRNLFKKGYRWKIGIDNRIIINEDPWIEDP
        +C  K  GGM FRD+  FNQA+LAK SWRIL  P+SL++K LRG+YF+ G FL+AK G  PS  WRSI+WGR+LFKKGYRWK+G    I ++ DPW+   
Subjt:  MCTSKCKGGMSFRDLQRFNQALLAKISWRILELPNSLMSKILRGRYFQDGDFLKAKAGNNPSMMWRSIVWGRNLFKKGYRWKIGIDNRIIINEDPWIEDP

Query:  DGRASLRVENDFKGTRVRALLKEDGSWNERLVREAVDKSEADLIL
           + +      +   V  L++  G W+E  VRE+   SEAD+IL
Subjt:  DGRASLRVENDFKGTRVRALLKEDGSWNERLVREAVDKSEADLIL

A0A803PM68 Uncharacterized protein3.4e-2943.54Show/hide
Query:  MCTSKCKGGMSFRDLQRFNQALLAKISWRILELPNSLMSKILRGRYFQDGDFLKAKAGNNPSMMWRSIVWGRNLFKKGYRWKIGIDNRIIINEDPWIEDP
        +C  K +GG+ FRDL  FNQALLAK  WR +  PNSL SK+L+  YF +   L+AK+GN+ S +WRS+VWG+ + +KGYRW+IG  N + + EDPW+  P
Subjt:  MCTSKCKGGMSFRDLQRFNQALLAKISWRILELPNSLMSKILRGRYFQDGDFLKAKAGNNPSMMWRSIVWGRNLFKKGYRWKIGIDNRIIINEDPWIEDP

Query:  DGRASLRVENDFKGTRVRALLKEDGSWNERLVREAVDKSEADLILNI
                 +  +G  V  L+K +G W+E  +R   + ++A+LIL +
Subjt:  DGRASLRVENDFKGTRVRALLKEDGSWNERLVREAVDKSEADLILNI

SwissProt top hitse value%identityAlignment
P0C2F6 Putative ribonuclease H protein At1g657501.9e-0829.46Show/hide
Query:  MCTSKCKGGMSFRDLQRFNQALLAKISWRILELPNSLMSKILRGRY----FQDGDFLKAKAGNNPSMMWRSIVWG-RNLFKKGYRWKIGIDNRIIINEDP
        +C+ K +GG+  R  +  N+AL++K+ WR+L+  NSL + +L+ +Y     +D  +L  K   + S  WRSI  G R++   G  W  G   +I    D 
Subjt:  MCTSKCKGGMSFRDLQRFNQALLAKISWRILELPNSLMSKILRGRY----FQDGDFLKAKAGNNPSMMWRSIVWG-RNLFKKGYRWKIGIDNRIIINEDP

Query:  WIEDPDGRASLRVENDFKGTRVRALLKED
        W+    G+  L ++N  + T    ++ +D
Subjt:  WIEDPDGRASLRVENDFKGTRVRALLKED

P93295 Uncharacterized mitochondrial protein AtMg003101.4e-1645Show/hide
Query:  MCTSK-CKGGMSFRDLQRFNQALLAKISWRILELPNSLMSKILRGRYFQDGDFLKAKAGNNPSMMWRSIVWGRNLFKKGYRWKIGIDNRIIINEDPWIED
        +C SK   GG+ FRDL  FNQALLAK S+RI+  P++L+S++LR RYF     ++   G  PS  WRSI+ GR L  +G    IG      +  D WI D
Subjt:  MCTSK-CKGGMSFRDLQRFNQALLAKISWRILELPNSLMSKILRGRYFQDGDFLKAKAGNNPSMMWRSIVWGRNLFKKGYRWKIGIDNRIIINEDPWIED

Arabidopsis top hitse value%identityAlignment
AT4G29090.1 Ribonuclease H-like superfamily protein7.1e-1939.05Show/hide
Query:  KCKGGMSFRDLQRFNQALLAKISWRILELPNSLMSKILRGRYFQDGDFLKAKAGNNPSMMWRSIVWGRNLFKKGYRWKIGIDNRIIINEDPWIEDPDGRA
        K +GG+ F+D++ FN ALL K  WR+L  P SLM+K+ + RYF   D L A  G+ PS +W+SI   + + ++G R  +G    III    W++     A
Subjt:  KCKGGMSFRDLQRFNQALLAKISWRILELPNSLMSKILRGRYFQDGDFLKAKAGNNPSMMWRSIVWGRNLFKKGYRWKIGIDNRIIINEDPWIEDPDGRA

Query:  SLRVE
        +LR++
Subjt:  SLRVE

ATMG00310.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein1.0e-1745Show/hide
Query:  MCTSK-CKGGMSFRDLQRFNQALLAKISWRILELPNSLMSKILRGRYFQDGDFLKAKAGNNPSMMWRSIVWGRNLFKKGYRWKIGIDNRIIINEDPWIED
        +C SK   GG+ FRDL  FNQALLAK S+RI+  P++L+S++LR RYF     ++   G  PS  WRSI+ GR L  +G    IG      +  D WI D
Subjt:  MCTSK-CKGGMSFRDLQRFNQALLAKISWRILELPNSLMSKILRGRYFQDGDFLKAKAGNNPSMMWRSIVWGRNLFKKGYRWKIGIDNRIIINEDPWIED


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGTACGAGCAAGTGCAAAGGTGGGATGAGCTTCAGAGATTTACAACGATTCAATCAAGCGTTGCTTGCAAAGATTAGTTGGAGAATTTTAGAGCTTCCTAATAGCTT
GATGTCTAAGATCCTCCGTGGAAGATATTTTCAAGATGGAGACTTTCTTAAGGCAAAGGCAGGGAACAATCCTTCTATGATGTGGAGAAGCATCGTTTGGGGTCGAAATC
TCTTCAAAAAAGGATATCGATGGAAGATAGGAATTGACAACAGAATCATTATTAATGAAGATCCTTGGATAGAAGACCCCGATGGAAGAGCTTCGCTAAGAGTAGAAAAC
GATTTTAAGGGCACGAGAGTGAGAGCCCTGTTAAAGGAAGATGGTAGTTGGAACGAAAGGCTAGTGCGAGAAGCTGTCGACAAGAGTGAAGCTGATCTGATCCTAAACAT
CTGA
mRNA sequenceShow/hide mRNA sequence
ATGTGTACGAGCAAGTGCAAAGGTGGGATGAGCTTCAGAGATTTACAACGATTCAATCAAGCGTTGCTTGCAAAGATTAGTTGGAGAATTTTAGAGCTTCCTAATAGCTT
GATGTCTAAGATCCTCCGTGGAAGATATTTTCAAGATGGAGACTTTCTTAAGGCAAAGGCAGGGAACAATCCTTCTATGATGTGGAGAAGCATCGTTTGGGGTCGAAATC
TCTTCAAAAAAGGATATCGATGGAAGATAGGAATTGACAACAGAATCATTATTAATGAAGATCCTTGGATAGAAGACCCCGATGGAAGAGCTTCGCTAAGAGTAGAAAAC
GATTTTAAGGGCACGAGAGTGAGAGCCCTGTTAAAGGAAGATGGTAGTTGGAACGAAAGGCTAGTGCGAGAAGCTGTCGACAAGAGTGAAGCTGATCTGATCCTAAACAT
CTGA
Protein sequenceShow/hide protein sequence
MCTSKCKGGMSFRDLQRFNQALLAKISWRILELPNSLMSKILRGRYFQDGDFLKAKAGNNPSMMWRSIVWGRNLFKKGYRWKIGIDNRIIINEDPWIEDPDGRASLRVEN
DFKGTRVRALLKEDGSWNERLVREAVDKSEADLILNI