; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0017955 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0017955
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionCCHC-type domain-containing protein
Genome locationchr5:12261996..12263083
RNA-Seq ExpressionLag0017955
SyntenyLag0017955
Gene Ontology termsNA
InterPro domainsIPR036691 - Endonuclease/exonuclease/phosphatase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF4381998.1 hypothetical protein G4B88_006630 [Cannabis sativa]5.0e-3436.33Show/hide
Query:  ESSKEGHIDTTVKSKG-SWWLFIGFYGNSMVSKRIDLWNCLERLGRLFDLPWIIEGDFNEILLAEEKFGGAERDQRQMNRFREAIDSCELQDLRCRGGRY
        +S   GHID  VK  G   W F GFYGN   S R + W  L RL  LFDLPWI  GDFNEIL   EK GG++R    M  F+ A+D C L DL   G  +
Subjt:  ESSKEGHIDTTVKSKG-SWWLFIGFYGNSMVSKRIDLWNCLERLGRLFDLPWIIEGDFNEILLAEEKFGGAERDQRQMNRFREAIDSCELQDLRCRGGRY

Query:  TWERKNSRGGRILERLDRFLGSRSLLQEFKEISITLLSKHSSDHNPTIATLNQTEKRKFLGTKRPVKFEEGWKDFEECKNIINKHW--MDSPINSPHGLS
        TW  K   G  + ERLDR+  ++     F  + +      +SDH P +ATL    +R+    KR  +FE  W    EC+ IIN+ W  +D P+ +   L 
Subjt:  TWERKNSRGGRILERLDRFLGSRSLLQEFKEISITLLSKHSSDHNPTIATLNQTEKRKFLGTKRPVKFEEGWKDFEECKNIINKHW--MDSPINSPHGLS

Query:  HQIVSCMIKLNCWNKDRLKGSLSGAISKKKVEVISLQNNSVGQDPERQLAAEKELE
             C  +L  WNK +  GSL   + + + ++  L + S       ++ ++ E E
Subjt:  HQIVSCMIKLNCWNKDRLKGSLSGAISKKKVEVISLQNNSVGQDPERQLAAEKELE

KAF4383622.1 hypothetical protein F8388_014122 [Cannabis sativa]6.3e-3737.64Show/hide
Query:  ESSKEGHIDTTVKSKG-SWWLFIGFYGNSMVSKRIDLWNCLERLGRLFDLPWIIEGDFNEILLAEEKFGGAERDQRQMNRFREAIDSCELQDLRCRGGRY
        +S   GHID  VK  G   W F GFYGN   S R + W  L RL  LFDLPWI  GDFNEIL   EK GG++R    M  F+ A+D C L DL   G  +
Subjt:  ESSKEGHIDTTVKSKG-SWWLFIGFYGNSMVSKRIDLWNCLERLGRLFDLPWIIEGDFNEILLAEEKFGGAERDQRQMNRFREAIDSCELQDLRCRGGRY

Query:  TWERKNSRGGRILERLDRFLGSRSLLQEFKEISITLLSKHSSDHNPTIATLNQTEKRKFLGTKRPVKFEEGWKDFEECKNIINKHW--MDSPINSPHGLS
        TW  K   G  + ERLDR+  ++     F  + +      +SDH P +ATL    +R+    KR  +FE  W    EC+ IIN+ W  +D P+ +   L 
Subjt:  TWERKNSRGGRILERLDRFLGSRSLLQEFKEISITLLSKHSSDHNPTIATLNQTEKRKFLGTKRPVKFEEGWKDFEECKNIINKHW--MDSPINSPHGLS

Query:  HQIVSCMIKLNCWNKDRLKGSLSGAI---SKKKVEVISLQNNSVGQDPERQLAAEKELENLLEEEEKYWKL
             C  +L  WNK +  GSL   +    K+  +++S+    V  +  R++  E +L +LL  EE YWK+
Subjt:  HQIVSCMIKLNCWNKDRLKGSLSGAI---SKKKVEVISLQNNSVGQDPERQLAAEKELENLLEEEEKYWKL

XP_022155286.1 uncharacterized protein LOC111022423 [Momordica charantia]8.6e-3437.35Show/hide
Query:  WLFIGFYGNSMVSKRIDLWNCLERLGRLFDLPWIIEGDFNEILLAEEKFGGAERDQRQMNRFREAIDSCELQDLRCRGGRYTWERKNSRGGRILERLDRF
        W F G YG+ +   R + W  + RL  +FDLPWI+ GDFNEIL   EK  G  R Q  M  F++ +D C L D    G  +TW   +     I ERLDRF
Subjt:  WLFIGFYGNSMVSKRIDLWNCLERLGRLFDLPWIIEGDFNEILLAEEKFGGAERDQRQMNRFREAIDSCELQDLRCRGGRYTWERKNSRGGRILERLDRF

Query:  LGSRSLLQEFKEISITLLSKHSSDHNPTIAT---LNQTEKRKFLGTKRPVKFEEGWKDFEECKNIINKHWMDSPINSPHGLSHQIVSCMIKLNCWNKDRL
        L + ++ Q  + + I  L   +SDH P +A    + +    +  G +RP +FEE W  F+ECK I+ + W             +I SC+ +L  WN  RL
Subjt:  LGSRSLLQEFKEISITLLSKHSSDHNPTIAT---LNQTEKRKFLGTKRPVKFEEGWKDFEECKNIINKHWMDSPINSPHGLSHQIVSCMIKLNCWNKDRL

Query:  KGSLSGAISKKKVEVISLQNNSVGQDPERQLAAEKELENLLEEEEKYWK
         GSL GAI +K+VE+  +  +      +    A+++LE LLEEEE YW+
Subjt:  KGSLSGAISKKKVEVISLQNNSVGQDPERQLAAEKELENLLEEEEKYWK

XP_030923509.1 uncharacterized protein LOC115950456 [Quercus lobata]8.6e-3435.77Show/hide
Query:  TVKSKGSWWLFIGFYGNSMVSKRIDLWNCLERLGRLFDLPWIIEGDFNEILLAEEKFGGAERDQRQMNRFREAIDSCELQDLRCRGGRYTWERKNSRGGR
        T    G  W   GFYGN    +R + W+ L  L R++ LPW+  GDFNE++  EEK GGA R Q+QM+ FRE I  C  +DL   G  +TW        R
Subjt:  TVKSKGSWWLFIGFYGNSMVSKRIDLWNCLERLGRLFDLPWIIEGDFNEILLAEEKFGGAERDQRQMNRFREAIDSCELQDLRCRGGRYTWERKNSRGGR

Query:  ILERLDRFLGSRSLLQEFKEISITLLSKHSSDHNPTIATLNQTEKRKFLGTKRPVKFEEGWKDFEECKNIINKHWMDS-PINSPHGLSHQIVSCMIKLNC
        +L RLDR L +   +  +K + +  L + +SDH   +  L  T   + L +KR   FE  W    ECK+II   W+DS  ++SP G++ ++ +C   L+ 
Subjt:  ILERLDRFLGSRSLLQEFKEISITLLSKHSSDHNPTIATLNQTEKRKFLGTKRPVKFEEGWKDFEECKNIINKHWMDS-PINSPHGLSHQIVSCMIKLNC

Query:  WNKDRLKGSLSGAISKKKVEVISLQNNSVGQDPERQLAAE-----KELENLLEEEEKYWK
        WNK     ++ G I KK  E     N  V +D +  L  +     KE+  LL+ EE  W+
Subjt:  WNKDRLKGSLSGAISKKKVEVISLQNNSVGQDPERQLAAE-----KELENLLEEEEKYWK

XP_030970416.1 uncharacterized protein LOC115990765 [Quercus lobata]8.6e-3435.77Show/hide
Query:  TVKSKGSWWLFIGFYGNSMVSKRIDLWNCLERLGRLFDLPWIIEGDFNEILLAEEKFGGAERDQRQMNRFREAIDSCELQDLRCRGGRYTWERKNSRGGR
        T    G  W   GFYGN    +R + W+ L  L R++ LPW+  GDFNE++  EEK GGA R Q+QM+ FRE I  C  +DL   G  +TW        R
Subjt:  TVKSKGSWWLFIGFYGNSMVSKRIDLWNCLERLGRLFDLPWIIEGDFNEILLAEEKFGGAERDQRQMNRFREAIDSCELQDLRCRGGRYTWERKNSRGGR

Query:  ILERLDRFLGSRSLLQEFKEISITLLSKHSSDHNPTIATLNQTEKRKFLGTKRPVKFEEGWKDFEECKNIINKHWMDS-PINSPHGLSHQIVSCMIKLNC
        +L RLDR L +   +  +K + +  L + +SDH   +  L  T   + L +KR   FE  W    ECK+II   W+DS  ++SP G++ ++ +C   L+ 
Subjt:  ILERLDRFLGSRSLLQEFKEISITLLSKHSSDHNPTIATLNQTEKRKFLGTKRPVKFEEGWKDFEECKNIINKHWMDS-PINSPHGLSHQIVSCMIKLNC

Query:  WNKDRLKGSLSGAISKKKVEVISLQNNSVGQDPERQLAAE-----KELENLLEEEEKYWK
        WNK     ++ G I KK  E     N  V +D +  L  +     KE+  LL+ EE  W+
Subjt:  WNKDRLKGSLSGAISKKKVEVISLQNNSVGQDPERQLAAE-----KELENLLEEEEKYWK

TrEMBL top hitse value%identityAlignment
A0A6J1DRA0 uncharacterized protein LOC1110224234.1e-3437.35Show/hide
Query:  WLFIGFYGNSMVSKRIDLWNCLERLGRLFDLPWIIEGDFNEILLAEEKFGGAERDQRQMNRFREAIDSCELQDLRCRGGRYTWERKNSRGGRILERLDRF
        W F G YG+ +   R + W  + RL  +FDLPWI+ GDFNEIL   EK  G  R Q  M  F++ +D C L D    G  +TW   +     I ERLDRF
Subjt:  WLFIGFYGNSMVSKRIDLWNCLERLGRLFDLPWIIEGDFNEILLAEEKFGGAERDQRQMNRFREAIDSCELQDLRCRGGRYTWERKNSRGGRILERLDRF

Query:  LGSRSLLQEFKEISITLLSKHSSDHNPTIAT---LNQTEKRKFLGTKRPVKFEEGWKDFEECKNIINKHWMDSPINSPHGLSHQIVSCMIKLNCWNKDRL
        L + ++ Q  + + I  L   +SDH P +A    + +    +  G +RP +FEE W  F+ECK I+ + W             +I SC+ +L  WN  RL
Subjt:  LGSRSLLQEFKEISITLLSKHSSDHNPTIAT---LNQTEKRKFLGTKRPVKFEEGWKDFEECKNIINKHWMDSPINSPHGLSHQIVSCMIKLNCWNKDRL

Query:  KGSLSGAISKKKVEVISLQNNSVGQDPERQLAAEKELENLLEEEEKYWK
         GSL GAI +K+VE+  +  +      +    A+++LE LLEEEE YW+
Subjt:  KGSLSGAISKKKVEVISLQNNSVGQDPERQLAAEKELENLLEEEEKYWK

A0A7J6GGL8 CCHC-type domain-containing protein2.4e-3436.33Show/hide
Query:  ESSKEGHIDTTVKSKG-SWWLFIGFYGNSMVSKRIDLWNCLERLGRLFDLPWIIEGDFNEILLAEEKFGGAERDQRQMNRFREAIDSCELQDLRCRGGRY
        +S   GHID  VK  G   W F GFYGN   S R + W  L RL  LFDLPWI  GDFNEIL   EK GG++R    M  F+ A+D C L DL   G  +
Subjt:  ESSKEGHIDTTVKSKG-SWWLFIGFYGNSMVSKRIDLWNCLERLGRLFDLPWIIEGDFNEILLAEEKFGGAERDQRQMNRFREAIDSCELQDLRCRGGRY

Query:  TWERKNSRGGRILERLDRFLGSRSLLQEFKEISITLLSKHSSDHNPTIATLNQTEKRKFLGTKRPVKFEEGWKDFEECKNIINKHW--MDSPINSPHGLS
        TW  K   G  + ERLDR+  ++     F  + +      +SDH P +ATL    +R+    KR  +FE  W    EC+ IIN+ W  +D P+ +   L 
Subjt:  TWERKNSRGGRILERLDRFLGSRSLLQEFKEISITLLSKHSSDHNPTIATLNQTEKRKFLGTKRPVKFEEGWKDFEECKNIINKHW--MDSPINSPHGLS

Query:  HQIVSCMIKLNCWNKDRLKGSLSGAISKKKVEVISLQNNSVGQDPERQLAAEKELE
             C  +L  WNK +  GSL   + + + ++  L + S       ++ ++ E E
Subjt:  HQIVSCMIKLNCWNKDRLKGSLSGAISKKKVEVISLQNNSVGQDPERQLAAEKELE

A0A7J6GL46 CCHC-type domain-containing protein3.1e-3737.64Show/hide
Query:  ESSKEGHIDTTVKSKG-SWWLFIGFYGNSMVSKRIDLWNCLERLGRLFDLPWIIEGDFNEILLAEEKFGGAERDQRQMNRFREAIDSCELQDLRCRGGRY
        +S   GHID  VK  G   W F GFYGN   S R + W  L RL  LFDLPWI  GDFNEIL   EK GG++R    M  F+ A+D C L DL   G  +
Subjt:  ESSKEGHIDTTVKSKG-SWWLFIGFYGNSMVSKRIDLWNCLERLGRLFDLPWIIEGDFNEILLAEEKFGGAERDQRQMNRFREAIDSCELQDLRCRGGRY

Query:  TWERKNSRGGRILERLDRFLGSRSLLQEFKEISITLLSKHSSDHNPTIATLNQTEKRKFLGTKRPVKFEEGWKDFEECKNIINKHW--MDSPINSPHGLS
        TW  K   G  + ERLDR+  ++     F  + +      +SDH P +ATL    +R+    KR  +FE  W    EC+ IIN+ W  +D P+ +   L 
Subjt:  TWERKNSRGGRILERLDRFLGSRSLLQEFKEISITLLSKHSSDHNPTIATLNQTEKRKFLGTKRPVKFEEGWKDFEECKNIINKHW--MDSPINSPHGLS

Query:  HQIVSCMIKLNCWNKDRLKGSLSGAI---SKKKVEVISLQNNSVGQDPERQLAAEKELENLLEEEEKYWKL
             C  +L  WNK +  GSL   +    K+  +++S+    V  +  R++  E +L +LL  EE YWK+
Subjt:  HQIVSCMIKLNCWNKDRLKGSLSGAI---SKKKVEVISLQNNSVGQDPERQLAAEKELENLLEEEEKYWKL

A0A7N2M6Y1 CCHC-type domain-containing protein4.1e-3435.77Show/hide
Query:  TVKSKGSWWLFIGFYGNSMVSKRIDLWNCLERLGRLFDLPWIIEGDFNEILLAEEKFGGAERDQRQMNRFREAIDSCELQDLRCRGGRYTWERKNSRGGR
        T    G  W   GFYGN    +R + W+ L  L R++ LPW+  GDFNE++  EEK GGA R Q+QM+ FRE I  C  +DL   G  +TW        R
Subjt:  TVKSKGSWWLFIGFYGNSMVSKRIDLWNCLERLGRLFDLPWIIEGDFNEILLAEEKFGGAERDQRQMNRFREAIDSCELQDLRCRGGRYTWERKNSRGGR

Query:  ILERLDRFLGSRSLLQEFKEISITLLSKHSSDHNPTIATLNQTEKRKFLGTKRPVKFEEGWKDFEECKNIINKHWMDS-PINSPHGLSHQIVSCMIKLNC
        +L RLDR L +   +  +K + +  L + +SDH   +  L  T   + L +KR   FE  W    ECK+II   W+DS  ++SP G++ ++ +C   L+ 
Subjt:  ILERLDRFLGSRSLLQEFKEISITLLSKHSSDHNPTIATLNQTEKRKFLGTKRPVKFEEGWKDFEECKNIINKHWMDS-PINSPHGLSHQIVSCMIKLNC

Query:  WNKDRLKGSLSGAISKKKVEVISLQNNSVGQDPERQLAAE-----KELENLLEEEEKYWK
        WNK     ++ G I KK  E     N  V +D +  L  +     KE+  LL+ EE  W+
Subjt:  WNKDRLKGSLSGAISKKKVEVISLQNNSVGQDPERQLAAE-----KELENLLEEEEKYWK

A0A803QMV0 Uncharacterized protein1.6e-3333.33Show/hide
Query:  HIDTTVK-SKGSWWLFIGFYGNSMVSKRIDLWNCLERLGRLFDLPWIIEGDFNEILLAEEKFGGAERDQRQMNRFREAIDSCELQDLRCRGGRYTW--ER
        HID+ V+   G WW F GFYG+   S+R   W  L+R+ R++  PW + GDFNEI+   EK GG  + +  +N FR+A+DSC+L+D+   G  YTW   R
Subjt:  HIDTTVK-SKGSWWLFIGFYGNSMVSKRIDLWNCLERLGRLFDLPWIIEGDFNEILLAEEKFGGAERDQRQMNRFREAIDSCELQDLRCRGGRYTW--ER

Query:  KNSRGGRILERLDRFLGSRSLLQEFKEISITLLSKHSSDHNPTIATLNQTEKRKFLGTKRPVK--FEEGWKDFEECKNIINKHW-MDSPINSPHGLSHQI
        KN     I ERLDR  G+      F  + +  L + +SDH P +        ++   T+   +  FE  W + EEC NI+   W  D  I++   L +++
Subjt:  KNSRGGRILERLDRFLGSRSLLQEFKEISITLLSKHSSDHNPTIATLNQTEKRKFLGTKRPVK--FEEGWKDFEECKNIINKHW-MDSPINSPHGLSHQI

Query:  VSCMIKLNCWNKDRLKGSLSGAISKKKVEVISLQNNSVGQDPERQLAAEKELENLLEEEEKYWK
          C   L  WNK + K  ++  + + + ++  L  ++  QD ++    E++    L++EEK+WK
Subjt:  VSCMIKLNCWNKDRLKGSLSGAISKKKVEVISLQNNSVGQDPERQLAAEKELENLLEEEEKYWK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G40390.1 DNAse I-like superfamily protein5.6e-0728.12Show/hide
Query:  SKRIDLWNCLERLGR---LFDLPWIIEGDFNEILLAEEKFG--GAERDQRQMNRFREAIDSCELQDLRCRGGRYTWERKNSRGGRILERLDRFLGSRSLL
        ++R  LW+ + RL     L + PW++ GDFN+I    E +    +    + +   +  +   +L DL CRG  YTW   + +   IL +LDR + +   L
Subjt:  SKRIDLWNCLERLGR---LFDLPWIIEGDFNEILLAEEKFG--GAERDQRQMNRFREAIDSCELQDLRCRGGRYTWERKNSRGGRILERLDRFLGSRSLL

Query:  QEFKEISITLLSKHSSDHNPTIATLNQT
          F   S        SDH   +  LN +
Subjt:  QEFKEISITLLSKHSSDHNPTIATLNQT


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTGGAGGGATATCGGTGTGGCTGAAGAACAGCCTCGCCGGACGCCATGAAAATATTATGTTGGAACGTTCGAGGTTTGAGGAATCCTCGAAAGAGGGGCATATAGA
TACCACAGTGAAATCCAAAGGGAGCTGGTGGCTTTTTATAGGATTCTATGGGAATTCTATGGTCAGCAAAAGAATAGACTTGTGGAATTGTCTTGAGAGATTAGGAAGAT
TGTTTGACCTCCCATGGATCATTGAGGGTGATTTTAATGAGATCTTATTAGCCGAAGAGAAGTTTGGAGGGGCTGAAAGGGACCAAAGACAGATGAATCGATTTAGGGAA
GCTATAGATAGTTGTGAGCTTCAAGACCTTCGTTGCCGTGGGGGAAGGTATACTTGGGAAAGGAAAAACAGTAGAGGAGGGAGGATTCTAGAGAGGTTAGATCGGTTTCT
AGGGTCCAGGAGTTTGTTGCAAGAGTTCAAGGAGATCTCTATTACGCTTCTATCAAAGCATAGTTCCGACCACAATCCAACAATAGCCACGCTGAATCAAACAGAGAAGA
GGAAGTTTTTAGGGACAAAAAGGCCTGTTAAATTCGAAGAAGGGTGGAAAGATTTTGAGGAATGCAAAAACATAATCAACAAGCATTGGATGGATTCTCCCATAAATTCG
CCTCACGGTTTGAGTCACCAAATTGTATCTTGTATGATAAAGCTGAATTGTTGGAATAAAGATAGATTAAAAGGATCCCTCAGTGGTGCAATAAGCAAAAAGAAGGTTGA
GGTAATCTCACTTCAAAACAATAGTGTGGGGCAGGATCCAGAGAGACAGTTGGCTGCAGAAAAAGAGCTTGAGAATCTTTTGGAGGAAGAAGAAAAATATTGGAAACTCT
GA
mRNA sequenceShow/hide mRNA sequence
ATGGTTGGAGGGATATCGGTGTGGCTGAAGAACAGCCTCGCCGGACGCCATGAAAATATTATGTTGGAACGTTCGAGGTTTGAGGAATCCTCGAAAGAGGGGCATATAGA
TACCACAGTGAAATCCAAAGGGAGCTGGTGGCTTTTTATAGGATTCTATGGGAATTCTATGGTCAGCAAAAGAATAGACTTGTGGAATTGTCTTGAGAGATTAGGAAGAT
TGTTTGACCTCCCATGGATCATTGAGGGTGATTTTAATGAGATCTTATTAGCCGAAGAGAAGTTTGGAGGGGCTGAAAGGGACCAAAGACAGATGAATCGATTTAGGGAA
GCTATAGATAGTTGTGAGCTTCAAGACCTTCGTTGCCGTGGGGGAAGGTATACTTGGGAAAGGAAAAACAGTAGAGGAGGGAGGATTCTAGAGAGGTTAGATCGGTTTCT
AGGGTCCAGGAGTTTGTTGCAAGAGTTCAAGGAGATCTCTATTACGCTTCTATCAAAGCATAGTTCCGACCACAATCCAACAATAGCCACGCTGAATCAAACAGAGAAGA
GGAAGTTTTTAGGGACAAAAAGGCCTGTTAAATTCGAAGAAGGGTGGAAAGATTTTGAGGAATGCAAAAACATAATCAACAAGCATTGGATGGATTCTCCCATAAATTCG
CCTCACGGTTTGAGTCACCAAATTGTATCTTGTATGATAAAGCTGAATTGTTGGAATAAAGATAGATTAAAAGGATCCCTCAGTGGTGCAATAAGCAAAAAGAAGGTTGA
GGTAATCTCACTTCAAAACAATAGTGTGGGGCAGGATCCAGAGAGACAGTTGGCTGCAGAAAAAGAGCTTGAGAATCTTTTGGAGGAAGAAGAAAAATATTGGAAACTCT
GA
Protein sequenceShow/hide protein sequence
MVGGISVWLKNSLAGRHENIMLERSRFEESSKEGHIDTTVKSKGSWWLFIGFYGNSMVSKRIDLWNCLERLGRLFDLPWIIEGDFNEILLAEEKFGGAERDQRQMNRFRE
AIDSCELQDLRCRGGRYTWERKNSRGGRILERLDRFLGSRSLLQEFKEISITLLSKHSSDHNPTIATLNQTEKRKFLGTKRPVKFEEGWKDFEECKNIINKHWMDSPINS
PHGLSHQIVSCMIKLNCWNKDRLKGSLSGAISKKKVEVISLQNNSVGQDPERQLAAEKELENLLEEEEKYWKL