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Lag0017965 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0017965
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRetrovirus-related Pol polyprotein from transposon RE1
Genome locationchr5:12359997..12361349
RNA-Seq ExpressionLag0017965
SyntenyLag0017965
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0045109.1 putative mitochondrial protein [Cucumis melo var. makuwa]3.5e-2368.75Show/hide
Query:  VNKACQFMHFSKVIHCQLVKHILRYLKGTINNGLLLHKPCNLSLVGFANANWASDPDDKKSIDTGFCVFFGGNLITWGSK
        VNKACQFMH  K+IH QLVK ILRYLKG++++GL L    NLSLVGFA+A+WASDPDD+KS  +G+CV+FG NL++WGSK
Subjt:  VNKACQFMHFSKVIHCQLVKHILRYLKGTINNGLLLHKPCNLSLVGFANANWASDPDDKKSIDTGFCVFFGGNLITWGSK

KAA0046194.1 putative mitochondrial protein [Cucumis melo var. makuwa]1.9e-2165Show/hide
Query:  VNKACQFMHFSKVIHCQLVKHILRYLKGTINNGLLLHKPCNLSLVGFANANWASDPDDKKSIDTGFCVFFGGNLITWGSK
        VNKACQFMH  K+IH QLVK ILRYLKG++++GL L    NLS+VGF +A+WASDPDD KS  +G+CV+FG  L++WGSK
Subjt:  VNKACQFMHFSKVIHCQLVKHILRYLKGTINNGLLLHKPCNLSLVGFANANWASDPDDKKSIDTGFCVFFGGNLITWGSK

KAA0057506.1 putative mitochondrial protein [Cucumis melo var. makuwa]2.7e-2368.75Show/hide
Query:  VNKACQFMHFSKVIHCQLVKHILRYLKGTINNGLLLHKPCNLSLVGFANANWASDPDDKKSIDTGFCVFFGGNLITWGSK
        VNKACQFMH  K+IH QLVK ILRYLKG++++GL L    NLS+VGFAN +WASDPDD+KSI  G+CV+FG NL++WGSK
Subjt:  VNKACQFMHFSKVIHCQLVKHILRYLKGTINNGLLLHKPCNLSLVGFANANWASDPDDKKSIDTGFCVFFGGNLITWGSK

XP_016903342.1 PREDICTED: uncharacterized mitochondrial protein AtMg00810-like [Cucumis melo]2.7e-2368.75Show/hide
Query:  VNKACQFMHFSKVIHCQLVKHILRYLKGTINNGLLLHKPCNLSLVGFANANWASDPDDKKSIDTGFCVFFGGNLITWGSK
        VNKACQFMH  K+IH QLVK ILRYLKG++++GL L    NLS+VGFAN +WASDPDD+KSI  G+CV+FG NL++WGSK
Subjt:  VNKACQFMHFSKVIHCQLVKHILRYLKGTINNGLLLHKPCNLSLVGFANANWASDPDDKKSIDTGFCVFFGGNLITWGSK

XP_022157873.1 uncharacterized protein LOC111024485 [Momordica charantia]5.4e-2471.25Show/hide
Query:  VNKACQFMHFSKVIHCQLVKHILRYLKGTINNGLLLHKPCNLSLVGFANANWASDPDDKKSIDTGFCVFFGGNLITWGSK
        VNKACQFMH   +IH QLVK ILRYLKGTI++GL L KP   SL G+A+ +WASDPDD+KS  +GFCVFFGGNL+TWGSK
Subjt:  VNKACQFMHFSKVIHCQLVKHILRYLKGTINNGLLLHKPCNLSLVGFANANWASDPDDKKSIDTGFCVFFGGNLITWGSK

TrEMBL top hitse value%identityAlignment
A0A1S4E543 uncharacterized mitochondrial protein AtMg00810-like1.3e-2368.75Show/hide
Query:  VNKACQFMHFSKVIHCQLVKHILRYLKGTINNGLLLHKPCNLSLVGFANANWASDPDDKKSIDTGFCVFFGGNLITWGSK
        VNKACQFMH  K+IH QLVK ILRYLKG++++GL L    NLS+VGFAN +WASDPDD+KSI  G+CV+FG NL++WGSK
Subjt:  VNKACQFMHFSKVIHCQLVKHILRYLKGTINNGLLLHKPCNLSLVGFANANWASDPDDKKSIDTGFCVFFGGNLITWGSK

A0A5A7TT17 Putative mitochondrial protein9.2e-2265Show/hide
Query:  VNKACQFMHFSKVIHCQLVKHILRYLKGTINNGLLLHKPCNLSLVGFANANWASDPDDKKSIDTGFCVFFGGNLITWGSK
        VNKACQFMH  K+IH QLVK ILRYLKG++++GL L    NLS+VGF +A+WASDPDD KS  +G+CV+FG  L++WGSK
Subjt:  VNKACQFMHFSKVIHCQLVKHILRYLKGTINNGLLLHKPCNLSLVGFANANWASDPDDKKSIDTGFCVFFGGNLITWGSK

A0A5A7UTP6 Putative mitochondrial protein1.3e-2368.75Show/hide
Query:  VNKACQFMHFSKVIHCQLVKHILRYLKGTINNGLLLHKPCNLSLVGFANANWASDPDDKKSIDTGFCVFFGGNLITWGSK
        VNKACQFMH  K+IH QLVK ILRYLKG++++GL L    NLS+VGFAN +WASDPDD+KSI  G+CV+FG NL++WGSK
Subjt:  VNKACQFMHFSKVIHCQLVKHILRYLKGTINNGLLLHKPCNLSLVGFANANWASDPDDKKSIDTGFCVFFGGNLITWGSK

A0A5D3DK36 Putative mitochondrial protein1.7e-2368.75Show/hide
Query:  VNKACQFMHFSKVIHCQLVKHILRYLKGTINNGLLLHKPCNLSLVGFANANWASDPDDKKSIDTGFCVFFGGNLITWGSK
        VNKACQFMH  K+IH QLVK ILRYLKG++++GL L    NLSLVGFA+A+WASDPDD+KS  +G+CV+FG NL++WGSK
Subjt:  VNKACQFMHFSKVIHCQLVKHILRYLKGTINNGLLLHKPCNLSLVGFANANWASDPDDKKSIDTGFCVFFGGNLITWGSK

A0A6J1DUJ4 uncharacterized protein LOC1110244852.6e-2471.25Show/hide
Query:  VNKACQFMHFSKVIHCQLVKHILRYLKGTINNGLLLHKPCNLSLVGFANANWASDPDDKKSIDTGFCVFFGGNLITWGSK
        VNKACQFMH   +IH QLVK ILRYLKGTI++GL L KP   SL G+A+ +WASDPDD+KS  +GFCVFFGGNL+TWGSK
Subjt:  VNKACQFMHFSKVIHCQLVKHILRYLKGTINNGLLLHKPCNLSLVGFANANWASDPDDKKSIDTGFCVFFGGNLITWGSK

SwissProt top hitse value%identityAlignment
P0CV72 Secreted RxLR effector protein 1618.9e-0633.33Show/hide
Query:  LRACVNKACQFMHFSKVIHCQLVKHILRYLKGTINNGLLLHKPCNLSLVGFANANWASDPDDKKSIDTGFCVFFGGNLITWGSK
        L A V    QF       H Q +K +LRYL+ T   GL   +     LVG+++A+WA D + ++S  +G+     G  ++W SK
Subjt:  LRACVNKACQFMHFSKVIHCQLVKHILRYLKGTINNGLLLHKPCNLSLVGFANANWASDPDDKKSIDTGFCVFFGGNLITWGSK

P92519 Uncharacterized mitochondrial protein AtMg008102.9e-1242.5Show/hide
Query:  VNKACQFMHFSKVIHCQLVKHILRYLKGTINNGLLLHKPCNLSLVGFANANWASDPDDKKSIDTGFCVFFGGNLITWGSK
        VN  CQ MH   +    L+K +LRY+KGTI +GL +HK   L++  F +++WA     ++S  TGFC F G N+I+W +K
Subjt:  VNKACQFMHFSKVIHCQLVKHILRYLKGTINNGLLLHKPCNLSLVGFANANWASDPDDKKSIDTGFCVFFGGNLITWGSK

P93290 Uncharacterized mitochondrial protein AtMg002409.6e-0840.85Show/hide
Query:  LRACVNKACQFMHFSKVIHCQLVKHILRYLKGTINNGLLLHKPCNLSLVGFANANWASDPDDKKSIDTGFC
        L   VN+  QF   S+    Q V  +L Y+KGT+  GL      +L L  FA+++WAS PD ++S+ TGFC
Subjt:  LRACVNKACQFMHFSKVIHCQLVKHILRYLKGTINNGLLLHKPCNLSLVGFANANWASDPDDKKSIDTGFC

Q94HW2 Retrovirus-related Pol polyprotein from transposon RE19.9e-1344.83Show/hide
Query:  VNKACQFMHFSKVIHCQLVKHILRYLKGTINNGLLLHKPCNLSLVGFANANWASDPDDKKSIDTGFCVFFGGNLITWGSKLSIGAYR
        VN+  QFMH     H Q +K ILRYL GT N+G+ L K   LSL  +++A+WA D DD  S + G+ V+ G + I+W SK   G  R
Subjt:  VNKACQFMHFSKVIHCQLVKHILRYLKGTINNGLLLHKPCNLSLVGFANANWASDPDDKKSIDTGFCVFFGGNLITWGSKLSIGAYR

Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE25.4e-1139.56Show/hide
Query:  LRACVNKACQFMHFSKVIHCQLVKHILRYLKGTINNGLLLHKPCNLSLVGFANANWASDPDDKKSIDTGFCVFFGGNLITWGSKLSIGAYR
        L   VN+  Q+MH     H   +K +LRYL GT ++G+ L K   LSL  +++A+WA D DD  S + G+ V+ G + I+W SK   G  R
Subjt:  LRACVNKACQFMHFSKVIHCQLVKHILRYLKGTINNGLLLHKPCNLSLVGFANANWASDPDDKKSIDTGFCVFFGGNLITWGSKLSIGAYR

Arabidopsis top hitse value%identityAlignment
AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 82.8e-1038.75Show/hide
Query:  VNKACQFMHFSKVIHCQLVKHILRYLKGTINNGLLLHKPCNLSLVGFANANWASDPDDKKSIDTGFCVFFGGNLITWGSK
        VNK  QF    ++ H Q V  IL Y+KGT+  GL       + L  F++A++ S  D ++S + G+C+F G +LI+W SK
Subjt:  VNKACQFMHFSKVIHCQLVKHILRYLKGTINNGLLLHKPCNLSLVGFANANWASDPDDKKSIDTGFCVFFGGNLITWGSK

ATMG00240.1 Gag-Pol-related retrotransposon family protein6.8e-0940.85Show/hide
Query:  LRACVNKACQFMHFSKVIHCQLVKHILRYLKGTINNGLLLHKPCNLSLVGFANANWASDPDDKKSIDTGFC
        L   VN+  QF   S+    Q V  +L Y+KGT+  GL      +L L  FA+++WAS PD ++S+ TGFC
Subjt:  LRACVNKACQFMHFSKVIHCQLVKHILRYLKGTINNGLLLHKPCNLSLVGFANANWASDPDDKKSIDTGFC

ATMG00810.1 DNA/RNA polymerases superfamily protein2.0e-1342.5Show/hide
Query:  VNKACQFMHFSKVIHCQLVKHILRYLKGTINNGLLLHKPCNLSLVGFANANWASDPDDKKSIDTGFCVFFGGNLITWGSK
        VN  CQ MH   +    L+K +LRY+KGTI +GL +HK   L++  F +++WA     ++S  TGFC F G N+I+W +K
Subjt:  VNKACQFMHFSKVIHCQLVKHILRYLKGTINNGLLLHKPCNLSLVGFANANWASDPDDKKSIDTGFCVFFGGNLITWGSK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCTGGGAAAAGAGAGAATCATGTCTCGATCCTTGGTTCCCACAAGCTCATCTCTAACGTCCAGAGAATAGCAAGTGGTTTCAAGATTGCAGGTAATCAATATTTGGT
ATGCATTTTAAAGAAAGCTCTTTATGGCCTAAAGCAGGCCCTACGGGCATGTGTTAACAAGGCTTGCCAATTTATGCACTTTTCCAAGGTCATTCATTGCCAACTTGTTA
AACATATATTAAGATATCTAAAGGGAACTATCAATAATGGCTTATTGCTTCATAAACCATGTAATTTGTCTCTTGTTGGTTTCGCTAATGCCAACTGGGCATCTGACCCT
GATGATAAAAAATCGATCGACACTGGATTTTGTGTGTTCTTTGGTGGTAACTTAATCACTTGGGGTTCGAAGTTGAGTATCGGGGCTTATCGTTACTGTTGTTGTCGAAT
TGGTTTGGCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGCCTGGGAAAAGAGAGAATCATGTCTCGATCCTTGGTTCCCACAAGCTCATCTCTAACGTCCAGAGAATAGCAAGTGGTTTCAAGATTGCAGGTAATCAATATTTGGT
ATGCATTTTAAAGAAAGCTCTTTATGGCCTAAAGCAGGCCCTACGGGCATGTGTTAACAAGGCTTGCCAATTTATGCACTTTTCCAAGGTCATTCATTGCCAACTTGTTA
AACATATATTAAGATATCTAAAGGGAACTATCAATAATGGCTTATTGCTTCATAAACCATGTAATTTGTCTCTTGTTGGTTTCGCTAATGCCAACTGGGCATCTGACCCT
GATGATAAAAAATCGATCGACACTGGATTTTGTGTGTTCTTTGGTGGTAACTTAATCACTTGGGGTTCGAAGTTGAGTATCGGGGCTTATCGTTACTGTTGTTGTCGAAT
TGGTTTGGCTTAA
Protein sequenceShow/hide protein sequence
MPGKRENHVSILGSHKLISNVQRIASGFKIAGNQYLVCILKKALYGLKQALRACVNKACQFMHFSKVIHCQLVKHILRYLKGTINNGLLLHKPCNLSLVGFANANWASDP
DDKKSIDTGFCVFFGGNLITWGSKLSIGAYRYCCCRIGLA