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Lag0017976 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0017976
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRNase H domain-containing protein
Genome locationchr5:12433011..12433316
RNA-Seq ExpressionLag0017976
SyntenyLag0017976
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF4361839.1 hypothetical protein F8388_003160 [Cannabis sativa]1.1e-0740.26Show/hide
Query:  CPRCKVKEEMSFHAIWECKTVKQHWQKSPFYLQPGPNTIHCVADLLWWCWMHMSCSQFEEFVVLSWWIWNRRNKELF
        C  C  +EE   HA+W C  V++ W K   Y +    ++H  +  LWW W H+S  +F  FV  SW IW RRNK +F
Subjt:  CPRCKVKEEMSFHAIWECKTVKQHWQKSPFYLQPGPNTIHCVADLLWWCWMHMSCSQFEEFVVLSWWIWNRRNKELF

KAF4385381.1 hypothetical protein G4B88_005713 [Cannabis sativa]2.4e-0740.85Show/hide
Query:  KEEMSFHAIWECKTVKQHWQKSPFYLQPGPNTIHCVADLLWWCWMHMSCSQFEEFVVLSWWIWNRRNKELF
        +EE   HA+W C TV++ W++   Y +    TIH  ++ LWW W H+S  +F  FV  +W IW RRN+ +F
Subjt:  KEEMSFHAIWECKTVKQHWQKSPFYLQPGPNTIHCVADLLWWCWMHMSCSQFEEFVVLSWWIWNRRNKELF

KAF4394884.1 hypothetical protein G4B88_002761 [Cannabis sativa]4.0e-0736.14Show/hide
Query:  MVTQKGCPRCKVKEEMSFHAIWECKTVKQHWQKSPFYLQPGPNTIHCVADLLWWCWMHMSCSQFEEFVVLSWWIWNRRNKELF
        M     C  C  +EE   HA+W C  V++ W++  +      NT H  ++ LWW W H++  +F  FV  SW IW RRN  +F
Subjt:  MVTQKGCPRCKVKEEMSFHAIWECKTVKQHWQKSPFYLQPGPNTIHCVADLLWWCWMHMSCSQFEEFVVLSWWIWNRRNKELF

KAF4400621.1 hypothetical protein G4B88_023029 [Cannabis sativa]1.5e-0637.97Show/hide
Query:  KGCPRCKVKEEMSFHAIWECKTVKQHWQKSPFYLQPGPNTIHCVADLLWWCWMHMSCSQFEEFVVLSWWIWNRRNKELF
        KG    K +EE   HA+W C  V++ W++  +      NT H  ++ LWW W H++  +F  FV  SW IW RRN  +F
Subjt:  KGCPRCKVKEEMSFHAIWECKTVKQHWQKSPFYLQPGPNTIHCVADLLWWCWMHMSCSQFEEFVVLSWWIWNRRNKELF

XP_023915286.1 uncharacterized protein LOC112026812 [Quercus suber]1.5e-0637.21Show/hide
Query:  MVTQKGCPRCKVKEEMSFHAIWECKTVKQHWQK-SPFYLQPGPNTIHCVADLLWWCWMHMSCSQFEEFVVLSWWIWNRRNKELFGG
        +V  + CP CK+  +   HA+WECK  +  W   S   LQ G      +  L    W  M    FE F+VL W +W+RRN+ +FGG
Subjt:  MVTQKGCPRCKVKEEMSFHAIWECKTVKQHWQK-SPFYLQPGPNTIHCVADLLWWCWMHMSCSQFEEFVVLSWWIWNRRNKELFGG

TrEMBL top hitse value%identityAlignment
A0A7J6EVX9 Uncharacterized protein5.1e-0840.26Show/hide
Query:  CPRCKVKEEMSFHAIWECKTVKQHWQKSPFYLQPGPNTIHCVADLLWWCWMHMSCSQFEEFVVLSWWIWNRRNKELF
        C  C  +EE   HA+W C  V++ W K   Y +    ++H  +  LWW W H+S  +F  FV  SW IW RRNK +F
Subjt:  CPRCKVKEEMSFHAIWECKTVKQHWQKSPFYLQPGPNTIHCVADLLWWCWMHMSCSQFEEFVVLSWWIWNRRNKELF

A0A7J6GRF4 RNase H domain-containing protein1.1e-0740.85Show/hide
Query:  KEEMSFHAIWECKTVKQHWQKSPFYLQPGPNTIHCVADLLWWCWMHMSCSQFEEFVVLSWWIWNRRNKELF
        +EE   HA+W C TV++ W++   Y +    TIH  ++ LWW W H+S  +F  FV  +W IW RRN+ +F
Subjt:  KEEMSFHAIWECKTVKQHWQKSPFYLQPGPNTIHCVADLLWWCWMHMSCSQFEEFVVLSWWIWNRRNKELF

A0A7J6HHY1 RNase H domain-containing protein1.9e-0736.14Show/hide
Query:  MVTQKGCPRCKVKEEMSFHAIWECKTVKQHWQKSPFYLQPGPNTIHCVADLLWWCWMHMSCSQFEEFVVLSWWIWNRRNKELF
        M     C  C  +EE   HA+W C  V++ W++  +      NT H  ++ LWW W H++  +F  FV  SW IW RRN  +F
Subjt:  MVTQKGCPRCKVKEEMSFHAIWECKTVKQHWQKSPFYLQPGPNTIHCVADLLWWCWMHMSCSQFEEFVVLSWWIWNRRNKELF

A0A7J6I0M5 RNase H domain-containing protein7.4e-0737.97Show/hide
Query:  KGCPRCKVKEEMSFHAIWECKTVKQHWQKSPFYLQPGPNTIHCVADLLWWCWMHMSCSQFEEFVVLSWWIWNRRNKELF
        KG    K +EE   HA+W C  V++ W++  +      NT H  ++ LWW W H++  +F  FV  SW IW RRN  +F
Subjt:  KGCPRCKVKEEMSFHAIWECKTVKQHWQKSPFYLQPGPNTIHCVADLLWWCWMHMSCSQFEEFVVLSWWIWNRRNKELF

A0A803PEX7 Uncharacterized protein3.0e-0838.96Show/hide
Query:  CPRCKVKEEMSFHAIWECKTVKQHWQKSPFYLQPGPNTIHCVADLLWWCWMHMSCSQFEEFVVLSWWIWNRRNKELF
        C  C  +EE   HA+W C TV++ W++  +      N IH  ++ LWW W H+S  +F  FV  +W IW RRN+ +F
Subjt:  CPRCKVKEEMSFHAIWECKTVKQHWQKSPFYLQPGPNTIHCVADLLWWCWMHMSCSQFEEFVVLSWWIWNRRNKELF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGACTCAGAAGGGATGTCCTAGGTGTAAGGTTAAGGAAGAGATGTCATTCCATGCCATATGGGAGTGCAAAACGGTGAAACAACATTGGCAAAAATCGCCATTTTA
TCTGCAGCCAGGTCCTAATACCATTCACTGTGTTGCAGATCTACTGTGGTGGTGTTGGATGCATATGTCATGTTCCCAATTTGAGGAGTTTGTGGTGTTGTCTTGGTGGA
TTTGGAATAGGAGAAATAAGGAGCTCTTTGGTGGGAGTCATAGCTTGGAGTTGGAGGATGGGGGGTGGGGATGGGTTGCAAAGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGTGACTCAGAAGGGATGTCCTAGGTGTAAGGTTAAGGAAGAGATGTCATTCCATGCCATATGGGAGTGCAAAACGGTGAAACAACATTGGCAAAAATCGCCATTTTA
TCTGCAGCCAGGTCCTAATACCATTCACTGTGTTGCAGATCTACTGTGGTGGTGTTGGATGCATATGTCATGTTCCCAATTTGAGGAGTTTGTGGTGTTGTCTTGGTGGA
TTTGGAATAGGAGAAATAAGGAGCTCTTTGGTGGGAGTCATAGCTTGGAGTTGGAGGATGGGGGGTGGGGATGGGTTGCAAAGTAG
Protein sequenceShow/hide protein sequence
MVTQKGCPRCKVKEEMSFHAIWECKTVKQHWQKSPFYLQPGPNTIHCVADLLWWCWMHMSCSQFEEFVVLSWWIWNRRNKELFGGSHSLELEDGGWGWVAK