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Lag0017983 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0017983
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionVAN3-binding protein isoform X1
Genome locationchr5:12576387..12583656
RNA-Seq ExpressionLag0017983
SyntenyLag0017983
Gene Ontology termsGO:0009734 - auxin-activated signaling pathway (biological process)
GO:0010087 - phloem or xylem histogenesis (biological process)
GO:0010305 - leaf vascular tissue pattern formation (biological process)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6574963.1 VAN3-binding protein, partial [Cucurbita argyrosperma subsp. sororia]8.9e-0976.47Show/hide
Query:  GGGRPSSLTVSDLTGELEEGTTFSGNPFSFASSETSQMVMERIMSQSTTIT
        GGG   S+ + DLT ELEEGTTFSGNPFSFASSETSQMVMERIMSQS  ++
Subjt:  GGGRPSSLTVSDLTGELEEGTTFSGNPFSFASSETSQMVMERIMSQSTTIT

KAG7013531.1 VAN3-binding protein, partial [Cucurbita argyrosperma subsp. argyrosperma]8.9e-0976.47Show/hide
Query:  GGGRPSSLTVSDLTGELEEGTTFSGNPFSFASSETSQMVMERIMSQSTTIT
        GGG   S+ + DLT ELEEGTTFSGNPFSFASSETSQMVMERIMSQS  ++
Subjt:  GGGRPSSLTVSDLTGELEEGTTFSGNPFSFASSETSQMVMERIMSQSTTIT

XP_022959008.1 VAN3-binding protein-like [Cucurbita moschata]8.9e-0976.47Show/hide
Query:  GGGRPSSLTVSDLTGELEEGTTFSGNPFSFASSETSQMVMERIMSQSTTIT
        GGG   S+ + DLT ELEEGTTFSGNPFSFASSETSQMVMERIMSQS  ++
Subjt:  GGGRPSSLTVSDLTGELEEGTTFSGNPFSFASSETSQMVMERIMSQSTTIT

XP_023006722.1 VAN3-binding protein-like [Cucurbita maxima]8.9e-0976.47Show/hide
Query:  GGGRPSSLTVSDLTGELEEGTTFSGNPFSFASSETSQMVMERIMSQSTTIT
        GGG   S+ + DLT ELEEGTTFSGNPFSFASSETSQMVMERIMSQS  ++
Subjt:  GGGRPSSLTVSDLTGELEEGTTFSGNPFSFASSETSQMVMERIMSQSTTIT

XP_023547376.1 VAN3-binding protein-like [Cucurbita pepo subsp. pepo]8.9e-0976.47Show/hide
Query:  GGGRPSSLTVSDLTGELEEGTTFSGNPFSFASSETSQMVMERIMSQSTTIT
        GGG   S+ + DLT ELEEGTTFSGNPFSFASSETSQMVMERIMSQS  ++
Subjt:  GGGRPSSLTVSDLTGELEEGTTFSGNPFSFASSETSQMVMERIMSQSTTIT

TrEMBL top hitse value%identityAlignment
A0A1S3BMP2 VAN3-binding protein isoform X15.6e-0974.51Show/hide
Query:  GGGRPSSLTVSDLTGELEEGTTFSGNPFSFASSETSQMVMERIMSQSTTIT
        GGG    + + DLTGEL+EGTTFSGNPFSFASSETSQMVMERIMSQS  ++
Subjt:  GGGRPSSLTVSDLTGELEEGTTFSGNPFSFASSETSQMVMERIMSQSTTIT

A0A2P5E379 Pleckstrin-like2.1e-0854.41Show/hide
Query:  EAVREEGPPSSRFRRKTGGGRPSSLTVSDLTGELEEGTTFSGNPFSFASSETSQMVMERIMSQSTTIT
        E  +   PP     +   GG  +     D+ GELEEG TFSGNPFSFASSETSQMVM+RIMSQS  ++
Subjt:  EAVREEGPPSSRFRRKTGGGRPSSLTVSDLTGELEEGTTFSGNPFSFASSETSQMVMERIMSQSTTIT

A0A5D3E4D7 VAN3-binding protein isoform X15.6e-0974.51Show/hide
Query:  GGGRPSSLTVSDLTGELEEGTTFSGNPFSFASSETSQMVMERIMSQSTTIT
        GGG    + + DLTGEL+EGTTFSGNPFSFASSETSQMVMERIMSQS  ++
Subjt:  GGGRPSSLTVSDLTGELEEGTTFSGNPFSFASSETSQMVMERIMSQSTTIT

A0A6J1H4Q0 VAN3-binding protein-like4.3e-0976.47Show/hide
Query:  GGGRPSSLTVSDLTGELEEGTTFSGNPFSFASSETSQMVMERIMSQSTTIT
        GGG   S+ + DLT ELEEGTTFSGNPFSFASSETSQMVMERIMSQS  ++
Subjt:  GGGRPSSLTVSDLTGELEEGTTFSGNPFSFASSETSQMVMERIMSQSTTIT

A0A6J1KWL4 VAN3-binding protein-like4.3e-0976.47Show/hide
Query:  GGGRPSSLTVSDLTGELEEGTTFSGNPFSFASSETSQMVMERIMSQSTTIT
        GGG   S+ + DLT ELEEGTTFSGNPFSFASSETSQMVMERIMSQS  ++
Subjt:  GGGRPSSLTVSDLTGELEEGTTFSGNPFSFASSETSQMVMERIMSQSTTIT

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G22810.1 Plant protein of unknown function (DUF828) with plant pleckstrin homology-like region3.7e-0563.89Show/hide
Query:  ELEEGTTFSGNPFSFASSETSQMVMERIMSQSTTIT
        E E+ +  SGNPFSFA SETSQMVM+RI+SQS  ++
Subjt:  ELEEGTTFSGNPFSFASSETSQMVMERIMSQSTTIT

AT4G14740.1 Plant protein of unknown function (DUF828) with plant pleckstrin homology-like region1.4e-0453.49Show/hide
Query:  TVSDLTGELEEGTTFSGNPFSFASSETSQMVMERIMSQSTTIT
        +V D  G+ E+    +GNPFSFA SETSQMVM+RI+S S  ++
Subjt:  TVSDLTGELEEGTTFSGNPFSFASSETSQMVMERIMSQSTTIT

AT4G14740.2 Plant protein of unknown function (DUF828) with plant pleckstrin homology-like region1.4e-0453.49Show/hide
Query:  TVSDLTGELEEGTTFSGNPFSFASSETSQMVMERIMSQSTTIT
        +V D  G+ E+    +GNPFSFA SETSQMVM+RI+S S  ++
Subjt:  TVSDLTGELEEGTTFSGNPFSFASSETSQMVMERIMSQSTTIT

AT5G43870.1 Plant protein of unknown function (DUF828) with plant pleckstrin homology-like region4.9e-0548.44Show/hide
Query:  PPSSRFRRKTGGGRPSSLTVSDLTGELEEGTTFSGNPFSFASSETSQMVMERIMSQSTTITATR
        PP  RF     G    +L   D     EE     GN FSFASSETS MVMERIM+QS  I++ R
Subjt:  PPSSRFRRKTGGGRPSSLTVSDLTGELEEGTTFSGNPFSFASSETSQMVMERIMSQSTTITATR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAACAGCTACACGACGACGTTTTAGATCTGCTCGTGCGAGACCCACGGACGACGGCACGTTTCAACGTTTCAGATCTGCTCGTGCGAGACCCTTTGACGGCGGCGCG
TTCCAGATCTGCTTGTGCGAGACCCATAGACGACGGCGCGTTCCAGATCTGCTCGTGCGAGACCCACGAAAGACGGCTCGACCCCCAGATCTACTCGTGCGAGACTCAAG
ATCTGTTCACGTTAATCTCGGGAGAAGACGACTTGGCCGACGGAAGCTTCAGAAGACGTGTGCTCGGAATTTTGGGTGAGGGAGGAGGGCCTCCCTCCCTTTTCGGCGCC
GGCGACGGGAGGAGGGAGGGCCCTCCTCCCTCACGGCTTCAGATCCTCCCTCACGGCTTCAGATCTGAAGCCGTGAGGGAGGAGGGCCCTCCCTCCTCCCGTTTCCGGCG
CAAAACGGGAGGAGGGAGGCCCTCCTCCCTCACGGTTTCAGATCTGACCGGCGAACTCGAAGAGGGTACCACTTTTTCTGGAAACCCATTTTCGTTTGCTTCCTCTGAAA
CTTCGCAGATGGTGATGGAGCGGATTATGTCACAGTCGACCACCATCACCGCCACTCGCCGCCGCTTGCCGTTGTTAGAATGA
mRNA sequenceShow/hide mRNA sequence
ATGGAACAGCTACACGACGACGTTTTAGATCTGCTCGTGCGAGACCCACGGACGACGGCACGTTTCAACGTTTCAGATCTGCTCGTGCGAGACCCTTTGACGGCGGCGCG
TTCCAGATCTGCTTGTGCGAGACCCATAGACGACGGCGCGTTCCAGATCTGCTCGTGCGAGACCCACGAAAGACGGCTCGACCCCCAGATCTACTCGTGCGAGACTCAAG
ATCTGTTCACGTTAATCTCGGGAGAAGACGACTTGGCCGACGGAAGCTTCAGAAGACGTGTGCTCGGAATTTTGGGTGAGGGAGGAGGGCCTCCCTCCCTTTTCGGCGCC
GGCGACGGGAGGAGGGAGGGCCCTCCTCCCTCACGGCTTCAGATCCTCCCTCACGGCTTCAGATCTGAAGCCGTGAGGGAGGAGGGCCCTCCCTCCTCCCGTTTCCGGCG
CAAAACGGGAGGAGGGAGGCCCTCCTCCCTCACGGTTTCAGATCTGACCGGCGAACTCGAAGAGGGTACCACTTTTTCTGGAAACCCATTTTCGTTTGCTTCCTCTGAAA
CTTCGCAGATGGTGATGGAGCGGATTATGTCACAGTCGACCACCATCACCGCCACTCGCCGCCGCTTGCCGTTGTTAGAATGA
Protein sequenceShow/hide protein sequence
MEQLHDDVLDLLVRDPRTTARFNVSDLLVRDPLTAARSRSACARPIDDGAFQICSCETHERRLDPQIYSCETQDLFTLISGEDDLADGSFRRRVLGILGEGGGPPSLFGA
GDGRREGPPPSRLQILPHGFRSEAVREEGPPSSRFRRKTGGGRPSSLTVSDLTGELEEGTTFSGNPFSFASSETSQMVMERIMSQSTTITATRRRLPLLE