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Lag0017987 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0017987
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionUnknown protein
Genome locationchr5:12637672..12638538
RNA-Seq ExpressionLag0017987
SyntenyLag0017987
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
PON46472.1 hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii]3.5e-0723.38Show/hide
Query:  VRGKMVSFSSVDINRVYQIKTPLHPRGNDSMKNPSTKQMKEALKMVTNKGVQWKDSQTKVKTLVPSDLKPESAVWLHFIRNR------------------
        VRG  VS+S   IN V+ +  P+    ++ ++N + + +   L+ V   G +W  S     T + S L P + VW HF+++R                  
Subjt:  VRGKMVSFSSVDINRVYQIKTPLHPRGNDSMKNPSTKQMKEALKMVTNKGVQWKDSQTKVKTLVPSDLKPESAVWLHFIRNR------------------

Query:  ------------SIIREEILSCGRKRAWKLFFGSLVTQLCQRGKVVPGKDEER-HFFKPTNGLPLIGKLQQNNDQRKDKASTSQ-ATPPPGLTPAS-PPE
                     +I  EI +C  ++   LFF SL+T+LC+  +     +EE+ H     + + +    Q+   +   + S+S+ AT     T      +
Subjt:  ------------SIIREEILSCGRKRAWKLFFGSLVTQLCQRGKVVPGKDEER-HFFKPTNGLPLIGKLQQNNDQRKDKASTSQ-ATPPPGLTPAS-PPE

Query:  LTPVSRPTPSSEALAF-VFRQVDRVEDKLKAYWVYAKERDEAIREFYLSIAPSIALVFPDFPQSLLPQ-----EKESD
        L  + +     E   + +   +     + + +W Y+KERD A+++   +        FP FPQ +L       E ESD
Subjt:  LTPVSRPTPSSEALAF-VFRQVDRVEDKLKAYWVYAKERDEAIREFYLSIAPSIALVFPDFPQSLLPQ-----EKESD

PON78020.1 hypothetical protein PanWU01x14_023740 [Parasponia andersonii]1.4e-0823.36Show/hide
Query:  VRGKMVSFSSVDINRVYQIKTPLHPRGNDSMKNPSTKQMKEALKMVTNKGVQWKDSQTKVKTLVPSDLKPESAVWLHFIRNR------------------
        VRG  VS+S   IN V+ +  P+    ++ ++N +  ++   L+ V   G +W  S     T + S L P + VW HF+++R                  
Subjt:  VRGKMVSFSSVDINRVYQIKTPLHPRGNDSMKNPSTKQMKEALKMVTNKGVQWKDSQTKVKTLVPSDLKPESAVWLHFIRNR------------------

Query:  ------------SIIREEILSCGRKRAWKLFFGSLVTQLCQRGKVVPGKDEERHFFKPTNGLPLIGKLQQNNDQRKDKASTSQATPPPGLTPASPPELTP
                     +I  EI +C  ++   LFF SL+T+LC+    +   +E+ H     + + +    Q+   +   + S+S+        PA+      
Subjt:  ------------SIIREEILSCGRKRAWKLFFGSLVTQLCQRGKVVPGKDEERHFFKPTNGLPLIGKLQQNNDQRKDKASTSQATPPPGLTPASPPELTP

Query:  VSRPTPSSEALAFVFRQVDRVEDKLKAYWVYAKERDEAIREFYLSIAPSIALVFPDFPQSLLPQ-----EKESD
                +AL     Q +    + + +W Y+KERD A+++   +        FP FPQ +L       E ESD
Subjt:  VSRPTPSSEALAFVFRQVDRVEDKLKAYWVYAKERDEAIREFYLSIAPSIALVFPDFPQSLLPQ-----EKESD

XP_038876674.1 chromatin assembly factor 1 subunit A-like, partial [Benincasa hispida]9.6e-0533.33Show/hide
Query:  VRGKMVSFSSVDINRVYQIKTPLHPRGNDSMKNPSTKQMKEALKMVTNKGVQWKDSQTKVKTLVPSDLKPESAVWLHFIRNRSI
        ++ + VSFS+ DIN +YQ+K   +  GN  + +P+ +QM++AL+++   G++W  S   V TL    L  E  +W++ ++ R I
Subjt:  VRGKMVSFSSVDINRVYQIKTPLHPRGNDSMKNPSTKQMKEALKMVTNKGVQWKDSQTKVKTLVPSDLKPESAVWLHFIRNRSI

XP_038888747.1 vicilin-like seed storage protein At2g18540 [Benincasa hispida]1.5e-0532.94Show/hide
Query:  VVRGKMVSFSSVDINRVYQIKTPLHPRGNDSMKNPSTKQMKEALKMVTNKGVQWKDSQTKVKTLVPSDLKPESAVWLHFIRNRSI
        +++G  V FS+ DIN +Y++K  L   GN  + +P    M++ L+++   G QW  S   +KTL  + L PE+ +W++ ++ R I
Subjt:  VVRGKMVSFSSVDINRVYQIKTPLHPRGNDSMKNPSTKQMKEALKMVTNKGVQWKDSQTKVKTLVPSDLKPESAVWLHFIRNRSI

XP_038904385.1 uncharacterized protein LOC120090747 [Benincasa hispida]1.0e-0635.29Show/hide
Query:  VVRGKMVSFSSVDINRVYQIKTPLHPRGNDSMKNPSTKQMKEALKMVTNKGVQWKDSQTKVKTLVPSDLKPESAVWLHFIRNRSI
        +++G +V FS+ DIN +Y++K      GN  + +P  ++M++AL+ +T  G QW  S   +KTL  S L PE+ +W++ ++ R I
Subjt:  VVRGKMVSFSSVDINRVYQIKTPLHPRGNDSMKNPSTKQMKEALKMVTNKGVQWKDSQTKVKTLVPSDLKPESAVWLHFIRNRSI

TrEMBL top hitse value%identityAlignment
A0A2P5BCG4 Uncharacterized protein (Fragment)1.7e-0723.38Show/hide
Query:  VRGKMVSFSSVDINRVYQIKTPLHPRGNDSMKNPSTKQMKEALKMVTNKGVQWKDSQTKVKTLVPSDLKPESAVWLHFIRNR------------------
        VRG  VS+S   IN V+ +  P+    ++ ++N + + +   L+ V   G +W  S     T + S L P + VW HF+++R                  
Subjt:  VRGKMVSFSSVDINRVYQIKTPLHPRGNDSMKNPSTKQMKEALKMVTNKGVQWKDSQTKVKTLVPSDLKPESAVWLHFIRNR------------------

Query:  ------------SIIREEILSCGRKRAWKLFFGSLVTQLCQRGKVVPGKDEER-HFFKPTNGLPLIGKLQQNNDQRKDKASTSQ-ATPPPGLTPAS-PPE
                     +I  EI +C  ++   LFF SL+T+LC+  +     +EE+ H     + + +    Q+   +   + S+S+ AT     T      +
Subjt:  ------------SIIREEILSCGRKRAWKLFFGSLVTQLCQRGKVVPGKDEER-HFFKPTNGLPLIGKLQQNNDQRKDKASTSQ-ATPPPGLTPAS-PPE

Query:  LTPVSRPTPSSEALAF-VFRQVDRVEDKLKAYWVYAKERDEAIREFYLSIAPSIALVFPDFPQSLLPQ-----EKESD
        L  + +     E   + +   +     + + +W Y+KERD A+++   +        FP FPQ +L       E ESD
Subjt:  LTPVSRPTPSSEALAF-VFRQVDRVEDKLKAYWVYAKERDEAIREFYLSIAPSIALVFPDFPQSLLPQ-----EKESD

A0A2P5DXM3 Uncharacterized protein6.9e-0923.36Show/hide
Query:  VRGKMVSFSSVDINRVYQIKTPLHPRGNDSMKNPSTKQMKEALKMVTNKGVQWKDSQTKVKTLVPSDLKPESAVWLHFIRNR------------------
        VRG  VS+S   IN V+ +  P+    ++ ++N +  ++   L+ V   G +W  S     T + S L P + VW HF+++R                  
Subjt:  VRGKMVSFSSVDINRVYQIKTPLHPRGNDSMKNPSTKQMKEALKMVTNKGVQWKDSQTKVKTLVPSDLKPESAVWLHFIRNR------------------

Query:  ------------SIIREEILSCGRKRAWKLFFGSLVTQLCQRGKVVPGKDEERHFFKPTNGLPLIGKLQQNNDQRKDKASTSQATPPPGLTPASPPELTP
                     +I  EI +C  ++   LFF SL+T+LC+    +   +E+ H     + + +    Q+   +   + S+S+        PA+      
Subjt:  ------------SIIREEILSCGRKRAWKLFFGSLVTQLCQRGKVVPGKDEERHFFKPTNGLPLIGKLQQNNDQRKDKASTSQATPPPGLTPASPPELTP

Query:  VSRPTPSSEALAFVFRQVDRVEDKLKAYWVYAKERDEAIREFYLSIAPSIALVFPDFPQSLLPQ-----EKESD
                +AL     Q +    + + +W Y+KERD A+++   +        FP FPQ +L       E ESD
Subjt:  VSRPTPSSEALAFVFRQVDRVEDKLKAYWVYAKERDEAIREFYLSIAPSIALVFPDFPQSLLPQ-----EKESD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGCATGGCAGTGGTGAGAGGTAAGATGGTCAGTTTTTCTTCTGTTGACATTAACAGGGTGTACCAGATCAAAACACCCCTACATCCAAGAGGGAATGATTCAATGAA
GAACCCCTCGACCAAACAAATGAAAGAAGCATTGAAGATGGTGACCAACAAGGGTGTTCAATGGAAGGACTCCCAGACAAAGGTGAAGACATTAGTGCCTAGCGATCTCA
AGCCAGAATCGGCAGTGTGGCTTCACTTTATCAGGAACAGGAGCATCATCAGAGAAGAGATCCTTTCATGTGGAAGAAAGAGAGCATGGAAGTTGTTCTTTGGGTCATTG
GTCACCCAACTATGTCAGAGGGGGAAGGTAGTTCCTGGGAAAGATGAGGAACGACACTTTTTCAAGCCAACCAATGGCCTACCTCTTATTGGGAAGCTTCAACAGAACAA
CGACCAAAGAAAGGACAAGGCTTCCACTTCCCAAGCTACTCCACCACCGGGGCTGACACCTGCTTCACCTCCTGAGCTTACTCCAGTCTCAAGGCCCACACCATCATCTG
AGGCCCTTGCATTCGTCTTTCGACAGGTAGACCGAGTTGAAGACAAGTTGAAGGCTTACTGGGTCTATGCTAAGGAGAGAGATGAAGCCATTAGAGAGTTCTATCTCTCT
ATTGCCCCGAGCATCGCCCTTGTATTTCCTGACTTCCCTCAATCGTTGTTGCCACAAGAGAAAGAATCTGATTCCCTTTATCTGTTGTTTTTGTGCATAGTCAAGTTGCT
TTTATAA
mRNA sequenceShow/hide mRNA sequence
ATGAGCATGGCAGTGGTGAGAGGTAAGATGGTCAGTTTTTCTTCTGTTGACATTAACAGGGTGTACCAGATCAAAACACCCCTACATCCAAGAGGGAATGATTCAATGAA
GAACCCCTCGACCAAACAAATGAAAGAAGCATTGAAGATGGTGACCAACAAGGGTGTTCAATGGAAGGACTCCCAGACAAAGGTGAAGACATTAGTGCCTAGCGATCTCA
AGCCAGAATCGGCAGTGTGGCTTCACTTTATCAGGAACAGGAGCATCATCAGAGAAGAGATCCTTTCATGTGGAAGAAAGAGAGCATGGAAGTTGTTCTTTGGGTCATTG
GTCACCCAACTATGTCAGAGGGGGAAGGTAGTTCCTGGGAAAGATGAGGAACGACACTTTTTCAAGCCAACCAATGGCCTACCTCTTATTGGGAAGCTTCAACAGAACAA
CGACCAAAGAAAGGACAAGGCTTCCACTTCCCAAGCTACTCCACCACCGGGGCTGACACCTGCTTCACCTCCTGAGCTTACTCCAGTCTCAAGGCCCACACCATCATCTG
AGGCCCTTGCATTCGTCTTTCGACAGGTAGACCGAGTTGAAGACAAGTTGAAGGCTTACTGGGTCTATGCTAAGGAGAGAGATGAAGCCATTAGAGAGTTCTATCTCTCT
ATTGCCCCGAGCATCGCCCTTGTATTTCCTGACTTCCCTCAATCGTTGTTGCCACAAGAGAAAGAATCTGATTCCCTTTATCTGTTGTTTTTGTGCATAGTCAAGTTGCT
TTTATAA
Protein sequenceShow/hide protein sequence
MSMAVVRGKMVSFSSVDINRVYQIKTPLHPRGNDSMKNPSTKQMKEALKMVTNKGVQWKDSQTKVKTLVPSDLKPESAVWLHFIRNRSIIREEILSCGRKRAWKLFFGSL
VTQLCQRGKVVPGKDEERHFFKPTNGLPLIGKLQQNNDQRKDKASTSQATPPPGLTPASPPELTPVSRPTPSSEALAFVFRQVDRVEDKLKAYWVYAKERDEAIREFYLS
IAPSIALVFPDFPQSLLPQEKESDSLYLLFLCIVKLLL