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Lag0017990 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0017990
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRibonuclease H
Genome locationchr5:12666036..12666871
RNA-Seq ExpressionLag0017990
SyntenyLag0017990
Gene Ontology termsNA
InterPro domainsIPR021109 - Aspartic peptidase domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022150858.1 uncharacterized protein LOC111018902 [Momordica charantia]3.9e-3949.45Show/hide
Query:  FHGDYDHTTWECIQLKDEIETLIREGYLKEFIGQDRGKKSLPTEQIREARIELGEQGMYSLLPDESSPNIEFTKKEDARIHHPHNDALVVTLTVANVKVH
        FH D+ H T +C  LK+E+E LI+ GYLKE++   +  K+   ++ R+A        +Y    +E    IEF + E   I HPHNDALV+ L +AN KVH
Subjt:  FHGDYDHTTWECIQLKDEIETLIREGYLKEFIGQDRGKKSLPTEQIREARIELGEQGMYSLLPDESSPNIEFTKKEDARIHHPHNDALVVTLTVANVKVH

Query:  QILIGGGSSADVLSSAAFDAMKLGSDRLRPSLAPLVGFGGEKVSPRGSIELPVTFGEGPQTITRMINFLVVDCVPAYNAILG
         IL+ GGSS D++S  A+  M LG   L+ S APLVGFGGE V P G IELPVTFG GP++IT+M++FLVVD   + NAILG
Subjt:  QILIGGGSSADVLSSAAFDAMKLGSDRLRPSLAPLVGFGGEKVSPRGSIELPVTFGEGPQTITRMINFLVVDCVPAYNAILG

XP_022156748.1 uncharacterized protein LOC111023587 [Momordica charantia]2.1e-4049.73Show/hide
Query:  MFHGDYDHTTWECIQLKDEIETLIREGYLKEFIGQDRGKKSLPTEQIREARIELGEQGMYSLLPDESSPNIEFTKKEDARIHHPHNDALVVTLTVANVKV
        +FH D+DH T +C  LK+E+E LIR GYLKE    ++ K       +REAR    +  +Y     +    IEF++ E  ++ H HNDALV+TL +ANVKV
Subjt:  MFHGDYDHTTWECIQLKDEIETLIREGYLKEFIGQDRGKKSLPTEQIREARIELGEQGMYSLLPDESSPNIEFTKKEDARIHHPHNDALVVTLTVANVKV

Query:  HQILIGGGSSADVLSSAAFDAMKLGSDRLRPSLAPLVGFGGEKVSPRGSIELPVTFGEGPQTITRMINFLVVDCVPAYNAILG
        H+IL+ GGSSAD++S  A+ AM L    L+ S APLVGFGGE+V   G IELPVTFG GP+ +T+M++FLVV+   +YN ILG
Subjt:  HQILIGGGSSADVLSSAAFDAMKLGSDRLRPSLAPLVGFGGEKVSPRGSIELPVTFGEGPQTITRMINFLVVDCVPAYNAILG

XP_030923408.1 uncharacterized protein LOC115950338 [Quercus lobata]3.3e-3842.65Show/hide
Query:  FHGDYDHTTWECIQLKDEIETLIREGYLKEFIGQDRGKKSLPTEQIREARIELGE-----------------------------QGMYSLLPDESSPNIE
        FH D+ H T EC  LK +IE LIR+G LK F+G+DR  + L  +    +R  LGE                              G          P I 
Subjt:  FHGDYDHTTWECIQLKDEIETLIREGYLKEFIGQDRGKKSLPTEQIREARIELGE-----------------------------QGMYSLLPDESSPNIE

Query:  FTKKEDARIHHPHNDALVVTLTVANVKVHQILIGGGSSADVLSSAAFDAMKLGSDRLRPSLAPLVGFGGEKVSPRGSIELPVTFGEGPQTITRMINFLVV
        FT ++  RIHHPH+DA+V+TL +A+    ++L+  GSSAD+L   AF  M+LG D+LRP  +PL+GFGG KV P G+I LPV  G  PQ IT+ +NFLVV
Subjt:  FTKKEDARIHHPHNDALVVTLTVANVKVHQILIGGGSSADVLSSAAFDAMKLGSDRLRPSLAPLVGFGGEKVSPRGSIELPVTFGEGPQTITRMINFLVV

Query:  DCVPAYNAILG
        DC  +YNAI+G
Subjt:  DCVPAYNAILG

XP_030958405.1 uncharacterized protein LOC115980276 [Quercus lobata]1.1e-3843.13Show/hide
Query:  FHGDYDHTTWECIQLKDEIETLIREGYLKEFIGQDRGKKSLPTEQIREARIELGE-----------------------------QGMYSLLPDESSPNIE
        FH D+ H T EC  LK +IE LIR+G LK F+G+DR  + L  +    +R  LGE                              G          P I 
Subjt:  FHGDYDHTTWECIQLKDEIETLIREGYLKEFIGQDRGKKSLPTEQIREARIELGE-----------------------------QGMYSLLPDESSPNIE

Query:  FTKKEDARIHHPHNDALVVTLTVANVKVHQILIGGGSSADVLSSAAFDAMKLGSDRLRPSLAPLVGFGGEKVSPRGSIELPVTFGEGPQTITRMINFLVV
        FT ++  RIHHPH+DA+V+TL +A+    ++L+  GSSAD+L   AF  M+LG DRLRP  +PL+GFGG KV P G+I LPV  G  PQ IT+ +NFLVV
Subjt:  FTKKEDARIHHPHNDALVVTLTVANVKVHQILIGGGSSADVLSSAAFDAMKLGSDRLRPSLAPLVGFGGEKVSPRGSIELPVTFGEGPQTITRMINFLVV

Query:  DCVPAYNAILG
        DC  +YNAI+G
Subjt:  DCVPAYNAILG

XP_030975818.1 uncharacterized protein LOC115995403 [Quercus lobata]3.3e-3843.66Show/hide
Query:  FHGDYDHTTWECIQLKDEIETLIREGYLKEFIGQDRGKKSLPTEQIREARIELGE-------------------------------QGMYSLLPDESSPN
        FH D+ H T EC  LK +IE LIR+G LK F+G+DR  + L  +    +R  LGE                               +   + L DE  P 
Subjt:  FHGDYDHTTWECIQLKDEIETLIREGYLKEFIGQDRGKKSLPTEQIREARIELGE-------------------------------QGMYSLLPDESSPN

Query:  IEFTKKEDARIHHPHNDALVVTLTVANVKVHQILIGGGSSADVLSSAAFDAMKLGSDRLRPSLAPLVGFGGEKVSPRGSIELPVTFGEGPQTITRMINFL
        I FT ++  RIHHPH+DA+V+TL +A+    ++L+  GSSAD+L   AF  M+LG D+LRP  +PL+GFGG KV P G+I LPV  G  PQ ITR +NFL
Subjt:  IEFTKKEDARIHHPHNDALVVTLTVANVKVHQILIGGGSSADVLSSAAFDAMKLGSDRLRPSLAPLVGFGGEKVSPRGSIELPVTFGEGPQTITRMINFL

Query:  VVDCVPAYNAILG
        VVDC  +YNAI+G
Subjt:  VVDCVPAYNAILG

TrEMBL top hitse value%identityAlignment
A0A6J1D8C9 uncharacterized protein LOC1110183001.7e-3542.11Show/hide
Query:  MFHGDYDHTTWECIQLKDEIETLIREGYLKEFI--------GQDRGKKSL---------PTEQ---------IREARIELGEQGMYSLLPDESSPNIEFT
        +FH D+DH T +C  LK E++ LI+ GYLKE++        G++  K            P E+         IRE R    +  +Y     +    IEF+
Subjt:  MFHGDYDHTTWECIQLKDEIETLIREGYLKEFI--------GQDRGKKSL---------PTEQ---------IREARIELGEQGMYSLLPDESSPNIEFT

Query:  KKEDARIHHPHNDALVVTLTVANVKVHQILIGGGSSADVLSSAAFDAMKLGSDRLRPSLAPLVGFGGEKVSPRGSIELPVTFGEGPQTITRMINFLVVDC
        + E   + HPHND LV+TL +AN KVH+IL+ GGSSAD++S  A+ AM LG    + S A LV F GE+V P G  EL VTFG GP++IT +++FLV+D 
Subjt:  KKEDARIHHPHNDALVVTLTVANVKVHQILIGGGSSADVLSSAAFDAMKLGSDRLRPSLAPLVGFGGEKVSPRGSIELPVTFGEGPQTITRMINFLVVDC

Query:  VPAYNAILG
          +YNAILG
Subjt:  VPAYNAILG

A0A6J1DAK4 uncharacterized protein LOC1110189021.9e-3949.45Show/hide
Query:  FHGDYDHTTWECIQLKDEIETLIREGYLKEFIGQDRGKKSLPTEQIREARIELGEQGMYSLLPDESSPNIEFTKKEDARIHHPHNDALVVTLTVANVKVH
        FH D+ H T +C  LK+E+E LI+ GYLKE++   +  K+   ++ R+A        +Y    +E    IEF + E   I HPHNDALV+ L +AN KVH
Subjt:  FHGDYDHTTWECIQLKDEIETLIREGYLKEFIGQDRGKKSLPTEQIREARIELGEQGMYSLLPDESSPNIEFTKKEDARIHHPHNDALVVTLTVANVKVH

Query:  QILIGGGSSADVLSSAAFDAMKLGSDRLRPSLAPLVGFGGEKVSPRGSIELPVTFGEGPQTITRMINFLVVDCVPAYNAILG
         IL+ GGSS D++S  A+  M LG   L+ S APLVGFGGE V P G IELPVTFG GP++IT+M++FLVVD   + NAILG
Subjt:  QILIGGGSSADVLSSAAFDAMKLGSDRLRPSLAPLVGFGGEKVSPRGSIELPVTFGEGPQTITRMINFLVVDCVPAYNAILG

A0A6J1DP33 uncharacterized protein LOC1110228862.1e-3845.7Show/hide
Query:  MFHGDYDHTTWECIQLKDEIETLIREGYLKEFIGQDRGKKSLPTEQ---IREARIELGEQGMYSLLPDESSPNIEFTKKEDARIHHPHNDALVVTLTVAN
        +FH D+ H T +C  LK+E+E LIR GYLKE++   +  ++   +    +RE R           + +E    +EF++ E   + HPHNDALV+TL +AN
Subjt:  MFHGDYDHTTWECIQLKDEIETLIREGYLKEFIGQDRGKKSLPTEQ---IREARIELGEQGMYSLLPDESSPNIEFTKKEDARIHHPHNDALVVTLTVAN

Query:  VKVHQILIGGGSSADVLSSAAFDAMKLGSDRLRPSLAPLVGFGGEKVSPRGSIELPVTFGEGPQTITRMINFLVVDCVPAYNAILG
         KVH+IL+ GGSS  ++S  A+ AM LG   L+ S  PLVGFGGE+V P G IELPV FG GP++I +M++FLVV    +YN ILG
Subjt:  VKVHQILIGGGSSADVLSSAAFDAMKLGSDRLRPSLAPLVGFGGEKVSPRGSIELPVTFGEGPQTITRMINFLVVDCVPAYNAILG

A0A6J1DRG9 uncharacterized protein LOC1110235871.0e-4049.73Show/hide
Query:  MFHGDYDHTTWECIQLKDEIETLIREGYLKEFIGQDRGKKSLPTEQIREARIELGEQGMYSLLPDESSPNIEFTKKEDARIHHPHNDALVVTLTVANVKV
        +FH D+DH T +C  LK+E+E LIR GYLKE    ++ K       +REAR    +  +Y     +    IEF++ E  ++ H HNDALV+TL +ANVKV
Subjt:  MFHGDYDHTTWECIQLKDEIETLIREGYLKEFIGQDRGKKSLPTEQIREARIELGEQGMYSLLPDESSPNIEFTKKEDARIHHPHNDALVVTLTVANVKV

Query:  HQILIGGGSSADVLSSAAFDAMKLGSDRLRPSLAPLVGFGGEKVSPRGSIELPVTFGEGPQTITRMINFLVVDCVPAYNAILG
        H+IL+ GGSSAD++S  A+ AM L    L+ S APLVGFGGE+V   G IELPVTFG GP+ +T+M++FLVV+   +YN ILG
Subjt:  HQILIGGGSSADVLSSAAFDAMKLGSDRLRPSLAPLVGFGGEKVSPRGSIELPVTFGEGPQTITRMINFLVVDCVPAYNAILG

A0A6J1DV51 uncharacterized protein LOC1110246622.7e-3843.81Show/hide
Query:  MFHGDYDHTTWECIQLKDEIETLIREGYLKEFI-------GQDRGKKSLPTEQIR-----EARIELGEQGMYSLLPDESSP---------------NIEF
        +FH D+ H T +C  LK+E+E LIR GYLKE++         +   KS P ++I+         ELG++   S+    +SP                I+F
Subjt:  MFHGDYDHTTWECIQLKDEIETLIREGYLKEFI-------GQDRGKKSLPTEQIR-----EARIELGEQGMYSLLPDESSP---------------NIEF

Query:  TKKEDARIHHPHNDALVVTLTVANVKVHQILIGGGSSADVLSSAAFDAMKLGSDRLRPSLAPLVGFGGEKVSPRGSIELPVTFGEGPQTITRMINFLVVD
        ++ E  R+ HPHNDALV+TL + N KVH+IL+ GGSS  ++S  A+ AM LG   L+ +LAPLVGFGGE+V  +  I+LPVTFG GP+ IT+++ FLVVD
Subjt:  TKKEDARIHHPHNDALVVTLTVANVKVHQILIGGGSSADVLSSAAFDAMKLGSDRLRPSLAPLVGFGGEKVSPRGSIELPVTFGEGPQTITRMINFLVVD

Query:  CVPAYNAILG
           +YNAILG
Subjt:  CVPAYNAILG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTCCATGGAGACTACGACCACACAACCTGGGAATGCATACAACTGAAGGATGAAATAGAAACCCTAATTCGAGAGGGCTACCTCAAGGAATTCATAGGACAGGACAG
AGGCAAGAAATCTTTGCCAACAGAACAGATTCGAGAGGCACGGATAGAGCTAGGAGAGCAAGGTATGTACTCGCTCTTACCCGATGAAAGCTCACCAAACATAGAGTTTA
CAAAGAAAGAGGATGCAAGAATACACCACCCACACAATGATGCATTGGTGGTAACCCTAACAGTCGCCAATGTCAAAGTGCATCAAATTTTAATTGGTGGAGGAAGCTCT
GCCGATGTCCTCTCGAGTGCCGCGTTTGATGCCATGAAGCTGGGAAGCGATCGCCTCAGGCCAAGCCTTGCACCGTTGGTGGGGTTTGGCGGAGAAAAAGTAAGCCCTAG
GGGAAGCATCGAACTGCCAGTAACGTTTGGGGAAGGACCGCAGACAATTACAAGGATGATCAACTTTCTAGTAGTGGATTGCGTCCCAGCATACAATGCCATTCTAGGGA
GTGGTGTATGGCGAGCAGAAGATGTTGAGGGAGTGCTACTTTATGGCGCTCAGAAACATCGACAGAAAGGTTCAAGCAACGTCGGCCTCGGGAGATGGCCGAGGCCAAGC
ATTTGA
mRNA sequenceShow/hide mRNA sequence
ATGTTCCATGGAGACTACGACCACACAACCTGGGAATGCATACAACTGAAGGATGAAATAGAAACCCTAATTCGAGAGGGCTACCTCAAGGAATTCATAGGACAGGACAG
AGGCAAGAAATCTTTGCCAACAGAACAGATTCGAGAGGCACGGATAGAGCTAGGAGAGCAAGGTATGTACTCGCTCTTACCCGATGAAAGCTCACCAAACATAGAGTTTA
CAAAGAAAGAGGATGCAAGAATACACCACCCACACAATGATGCATTGGTGGTAACCCTAACAGTCGCCAATGTCAAAGTGCATCAAATTTTAATTGGTGGAGGAAGCTCT
GCCGATGTCCTCTCGAGTGCCGCGTTTGATGCCATGAAGCTGGGAAGCGATCGCCTCAGGCCAAGCCTTGCACCGTTGGTGGGGTTTGGCGGAGAAAAAGTAAGCCCTAG
GGGAAGCATCGAACTGCCAGTAACGTTTGGGGAAGGACCGCAGACAATTACAAGGATGATCAACTTTCTAGTAGTGGATTGCGTCCCAGCATACAATGCCATTCTAGGGA
GTGGTGTATGGCGAGCAGAAGATGTTGAGGGAGTGCTACTTTATGGCGCTCAGAAACATCGACAGAAAGGTTCAAGCAACGTCGGCCTCGGGAGATGGCCGAGGCCAAGC
ATTTGA
Protein sequenceShow/hide protein sequence
MFHGDYDHTTWECIQLKDEIETLIREGYLKEFIGQDRGKKSLPTEQIREARIELGEQGMYSLLPDESSPNIEFTKKEDARIHHPHNDALVVTLTVANVKVHQILIGGGSS
ADVLSSAAFDAMKLGSDRLRPSLAPLVGFGGEKVSPRGSIELPVTFGEGPQTITRMINFLVVDCVPAYNAILGSGVWRAEDVEGVLLYGAQKHRQKGSSNVGLGRWPRPS
I