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Lag0018009 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0018009
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionF-box protein CPR30-like
Genome locationchr5:13309821..13311089
RNA-Seq ExpressionLag0018009
SyntenyLag0018009
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008443401.1 PREDICTED: F-box protein CPR30-like [Cucumis melo]1.3e-1260.87Show/hide
Query:  KDIFLCNPTIREFRKLPPSIL-----PTSIDGHDTFTDAIGFGYDLKSKDFKVVRAVNCADEGGGLTLP
        KDIFLCNP+ REF KLPPSIL     P   DG+D+ T+A+GFGYD KS+DFKVVR V+   EG G   P
Subjt:  KDIFLCNPTIREFRKLPPSIL-----PTSIDGHDTFTDAIGFGYDLKSKDFKVVRAVNCADEGGGLTLP
XP_022935692.1 F-box protein CPR30-like [Cucurbita moschata]9.2e-1463.08Show/hide
Query:  KKDIFLCNPTIREFRKLPPSIL-----PTSIDGHDTFTDAIGFGYDLKSKDFKVVRAVNCADEGG
        ++DIFLCNP  REFRKLPPSIL     PT  DG+D+ T+A+GFGYD KS+DFKVVR VN  +  G
Subjt:  KKDIFLCNPTIREFRKLPPSIL-----PTSIDGHDTFTDAIGFGYDLKSKDFKVVRAVNCADEGG
XP_022983805.1 F-box protein CPR1-like [Cucurbita maxima]3.5e-1363.08Show/hide
Query:  KKDIFLCNPTIREFRKLPPSIL-----PTSIDGHDTFTDAIGFGYDLKSKDFKVVRAVNCADEGG
        ++DIFLCNP  REFRKLP SIL     PT  DG+D+ T+A+GFGYD KSKDFKVVR VN  +  G
Subjt:  KKDIFLCNPTIREFRKLPPSIL-----PTSIDGHDTFTDAIGFGYDLKSKDFKVVRAVNCADEGG
XP_023526117.1 F-box protein CPR1-like [Cucurbita pepo subsp. pepo]1.4e-1461.43Show/hide
Query:  KKDIFLCNPTIREFRKLPPSIL-----PTSIDGHDTFTDAIGFGYDLKSKDFKVVRAVNCADEGGGLTLP
        ++DIFLCNP  REFRKLPPSIL     PT  DG+D+ T+A+GFGYD KS+DFKVVR VN  +  G   LP
Subjt:  KKDIFLCNPTIREFRKLPPSIL-----PTSIDGHDTFTDAIGFGYDLKSKDFKVVRAVNCADEGGGLTLP
XP_038906036.1 F-box protein CPR1-like [Benincasa hispida]1.7e-1260Show/hide
Query:  KKDIFLCNPTIREFRKLPPSIL-----PTSIDGHDTFTDAIGFGYDLKSKDFKVVRAVNCADEGG
        +KDIFLCNP+ REF KLPPSIL     P   DG+D+ T+A+GFGYD KS+DFKVVR V+  +  G
Subjt:  KKDIFLCNPTIREFRKLPPSIL-----PTSIDGHDTFTDAIGFGYDLKSKDFKVVRAVNCADEGG
TrEMBL top hitse value%identityAlignment
A0A1S3B8N6 F-box protein CPR30-like6.4e-1360.87Show/hide
Query:  KDIFLCNPTIREFRKLPPSIL-----PTSIDGHDTFTDAIGFGYDLKSKDFKVVRAVNCADEGGGLTLP
        KDIFLCNP+ REF KLPPSIL     P   DG+D+ T+A+GFGYD KS+DFKVVR V+   EG G   P
Subjt:  KDIFLCNPTIREFRKLPPSIL-----PTSIDGHDTFTDAIGFGYDLKSKDFKVVRAVNCADEGGGLTLP
A0A5D3DPY4 F-box protein CPR30-like6.4e-1360.87Show/hide
Query:  KDIFLCNPTIREFRKLPPSIL-----PTSIDGHDTFTDAIGFGYDLKSKDFKVVRAVNCADEGGGLTLP
        KDIFLCNP+ REF KLPPSIL     P   DG+D+ T+A+GFGYD KS+DFKVVR V+   EG G   P
Subjt:  KDIFLCNPTIREFRKLPPSIL-----PTSIDGHDTFTDAIGFGYDLKSKDFKVVRAVNCADEGGGLTLP
A0A6J1DYQ4 F-box/kelch-repeat protein At3g23880-like3.2e-1258.57Show/hide
Query:  KKDIFLCNPTIREFRKLPPSIL-----PTSIDGHDTFTDAIGFGYDLKSKDFKVVRAVNCADEGGGLTLP
        + DI LCNP  REFRKLPPSIL     P   DG+D+ T+A+GFGYD +S+DFKVVR VN   EG G   P
Subjt:  KKDIFLCNPTIREFRKLPPSIL-----PTSIDGHDTFTDAIGFGYDLKSKDFKVVRAVNCADEGGGLTLP
A0A6J1F6B1 F-box protein CPR30-like4.5e-1463.08Show/hide
Query:  KKDIFLCNPTIREFRKLPPSIL-----PTSIDGHDTFTDAIGFGYDLKSKDFKVVRAVNCADEGG
        ++DIFLCNP  REFRKLPPSIL     PT  DG+D+ T+A+GFGYD KS+DFKVVR VN  +  G
Subjt:  KKDIFLCNPTIREFRKLPPSIL-----PTSIDGHDTFTDAIGFGYDLKSKDFKVVRAVNCADEGG
A0A6J1J6Y5 F-box protein CPR1-like1.7e-1363.08Show/hide
Query:  KKDIFLCNPTIREFRKLPPSIL-----PTSIDGHDTFTDAIGFGYDLKSKDFKVVRAVNCADEGG
        ++DIFLCNP  REFRKLP SIL     PT  DG+D+ T+A+GFGYD KSKDFKVVR VN  +  G
Subjt:  KKDIFLCNPTIREFRKLPPSIL-----PTSIDGHDTFTDAIGFGYDLKSKDFKVVRAVNCADEGG
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G06240.1 F-box family protein2.4e-0428.99Show/hide
Query:  SQNTFFSASSDKKDIFLCNPTIREFRKLPPSILPTSIDGHDTFTDAIGFGYDLKSKDFKVVRAVNCADE
        S N     S  +  +FL NPT  + ++LP +  P S++         GFG+D  + D+K+V+ V  +++
Subjt:  SQNTFFSASSDKKDIFLCNPTIREFRKLPPSILPTSIDGHDTFTDAIGFGYDLKSKDFKVVRAVNCADE
AT4G12560.1 F-box and associated interaction domains-containing protein2.4e-0438.46Show/hide
Query:  SQNTFFSASSDKKDIFLCNPTIREFRKLPPSILPTSIDGHDTFTDAI-GFGYDLKSKDFKVVRAV
        S N     S+   D+ + NP+ R+  +LPPS +    DG  T      G GYD  S D+KVVR V
Subjt:  SQNTFFSASSDKKDIFLCNPTIREFRKLPPSILPTSIDGHDTFTDAI-GFGYDLKSKDFKVVRAV
AT4G12560.2 F-box and associated interaction domains-containing protein2.4e-0438.46Show/hide
Query:  SQNTFFSASSDKKDIFLCNPTIREFRKLPPSILPTSIDGHDTFTDAI-GFGYDLKSKDFKVVRAV
        S N     S+   D+ + NP+ R+  +LPPS +    DG  T      G GYD  S D+KVVR V
Subjt:  SQNTFFSASSDKKDIFLCNPTIREFRKLPPSILPTSIDGHDTFTDAI-GFGYDLKSKDFKVVRAV

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATTTGAAGAGTGATGATCGAGATTCTATCAAGGCTTCCGCCAGAGACTCTACTCAATTCAAGTTTGTTAGCAAATTATGGTATGCTCTAATTAACGATCCTAAAAT
TGTAAAAAGCATTTCTCAAAACACATTCTTCTCCGCGTCTTCTGACAAAAAGGATATCTTCCTTTGCAACCCAACGATCAGAGAGTTTCGTAAACTTCCGCCATCGATTC
TTCCAACTTCGATTGACGGTCACGATACGTTCACGGACGCCATCGGATTTGGGTATGATTTGAAATCTAAGGATTTCAAAGTGGTTAGGGCTGTGAATTGTGCGGATGAA
GGTGGAGGATTGACCCTCCCAGAGCAGAAGTTTACGATTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGATTTGAAGAGTGATGATCGAGATTCTATCAAGGCTTCCGCCAGAGACTCTACTCAATTCAAGTTTGTTAGCAAATTATGGTATGCTCTAATTAACGATCCTAAAAT
TGTAAAAAGCATTTCTCAAAACACATTCTTCTCCGCGTCTTCTGACAAAAAGGATATCTTCCTTTGCAACCCAACGATCAGAGAGTTTCGTAAACTTCCGCCATCGATTC
TTCCAACTTCGATTGACGGTCACGATACGTTCACGGACGCCATCGGATTTGGGTATGATTTGAAATCTAAGGATTTCAAAGTGGTTAGGGCTGTGAATTGTGCGGATGAA
GGTGGAGGATTGACCCTCCCAGAGCAGAAGTTTACGATTTGA
Protein sequenceShow/hide protein sequence
MDLKSDDRDSIKASARDSTQFKFVSKLWYALINDPKIVKSISQNTFFSASSDKKDIFLCNPTIREFRKLPPSILPTSIDGHDTFTDAIGFGYDLKSKDFKVVRAVNCADE
GGGLTLPEQKFTI