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Lag0018015 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0018015
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionTryptophanyl-tRNA synthetase
Genome locationchr5:13553522..13556554
RNA-Seq ExpressionLag0018015
SyntenyLag0018015
Gene Ontology termsGO:0006436 - tryptophanyl-tRNA aminoacylation (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0004830 - tryptophan-tRNA ligase activity (molecular function)
GO:0005524 - ATP binding (molecular function)
GO:0016740 - transferase activity (molecular function)
InterPro domainsIPR014729 - Rossmann-like alpha/beta/alpha sandwich fold


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAB2012785.1 hypothetical protein ES319_D09G114700v1 [Gossypium barbadense]8.4e-2588.57Show/hide
Query:  LLP-MQSLYFQDAFKVPLVIQLTDNEKCMWKNLSVEESQRLARENTKDIIACGFDISKTFIFSDFDYVGG
        L+P M + Y QDAFKVPLVIQLTD+EKCMWKNLSVEESQRLAREN KDIIACGFDISKTFIFSDFDYVGG
Subjt:  LLP-MQSLYFQDAFKVPLVIQLTDNEKCMWKNLSVEESQRLARENTKDIIACGFDISKTFIFSDFDYVGG

KAB2065738.1 hypothetical protein ES319_A09G111000v1 [Gossypium barbadense]8.4e-2588.57Show/hide
Query:  LLP-MQSLYFQDAFKVPLVIQLTDNEKCMWKNLSVEESQRLARENTKDIIACGFDISKTFIFSDFDYVGG
        L+P M + Y QDAFKVPLVIQLTD+EKCMWKNLSVEESQRLAREN KDIIACGFDISKTFIFSDFDYVGG
Subjt:  LLP-MQSLYFQDAFKVPLVIQLTDNEKCMWKNLSVEESQRLARENTKDIIACGFDISKTFIFSDFDYVGG

MBA0684076.1 hypothetical protein [Gossypium aridum]8.4e-2588.57Show/hide
Query:  LLP-MQSLYFQDAFKVPLVIQLTDNEKCMWKNLSVEESQRLARENTKDIIACGFDISKTFIFSDFDYVGG
        L+P M + Y QDAFKVPLVIQLTD+EKCMWKNLSVEESQRLAREN KDIIACGFDISKTFIFSDFDYVGG
Subjt:  LLP-MQSLYFQDAFKVPLVIQLTDNEKCMWKNLSVEESQRLARENTKDIIACGFDISKTFIFSDFDYVGG

PPD91328.1 hypothetical protein GOBAR_DD11728 [Gossypium barbadense]8.4e-2588.57Show/hide
Query:  LLP-MQSLYFQDAFKVPLVIQLTDNEKCMWKNLSVEESQRLARENTKDIIACGFDISKTFIFSDFDYVGG
        L+P M + Y QDAFKVPLVIQLTD+EKCMWKNLSVEESQRLAREN KDIIACGFDISKTFIFSDFDYVGG
Subjt:  LLP-MQSLYFQDAFKVPLVIQLTDNEKCMWKNLSVEESQRLARENTKDIIACGFDISKTFIFSDFDYVGG

XP_004246071.1 tryptophan--tRNA ligase, cytoplasmic [Solanum lycopersicum]8.4e-2588.57Show/hide
Query:  LLP-MQSLYFQDAFKVPLVIQLTDNEKCMWKNLSVEESQRLARENTKDIIACGFDISKTFIFSDFDYVGG
        L+P M + Y QDAFKVPLVIQLTD+EKCMWKNLSVEESQRLAREN KDIIACGFDISKTFIFSDFDYVGG
Subjt:  LLP-MQSLYFQDAFKVPLVIQLTDNEKCMWKNLSVEESQRLARENTKDIIACGFDISKTFIFSDFDYVGG

TrEMBL top hitse value%identityAlignment
A0A0B0NGP7 Tryptophanyl-tRNA synthetase4.1e-2588.57Show/hide
Query:  LLP-MQSLYFQDAFKVPLVIQLTDNEKCMWKNLSVEESQRLARENTKDIIACGFDISKTFIFSDFDYVGG
        L+P M + Y QDAFKVPLVIQLTD+EKCMWKNLSVEESQRLAREN KDIIACGFDISKTFIFSDFDYVGG
Subjt:  LLP-MQSLYFQDAFKVPLVIQLTDNEKCMWKNLSVEESQRLARENTKDIIACGFDISKTFIFSDFDYVGG

A0A0D2SW54 Tryptophanyl-tRNA synthetase4.1e-2588.57Show/hide
Query:  LLP-MQSLYFQDAFKVPLVIQLTDNEKCMWKNLSVEESQRLARENTKDIIACGFDISKTFIFSDFDYVGG
        L+P M + Y QDAFKVPLVIQLTD+EKCMWKNLSVEESQRLAREN KDIIACGFDISKTFIFSDFDYVGG
Subjt:  LLP-MQSLYFQDAFKVPLVIQLTDNEKCMWKNLSVEESQRLARENTKDIIACGFDISKTFIFSDFDYVGG

A0A2P5VSV0 Tryptophanyl-tRNA synthetase4.1e-2588.57Show/hide
Query:  LLP-MQSLYFQDAFKVPLVIQLTDNEKCMWKNLSVEESQRLARENTKDIIACGFDISKTFIFSDFDYVGG
        L+P M + Y QDAFKVPLVIQLTD+EKCMWKNLSVEESQRLAREN KDIIACGFDISKTFIFSDFDYVGG
Subjt:  LLP-MQSLYFQDAFKVPLVIQLTDNEKCMWKNLSVEESQRLARENTKDIIACGFDISKTFIFSDFDYVGG

A0A6A2ZLF1 Tryptophanyl-tRNA synthetase4.1e-2588.57Show/hide
Query:  LLP-MQSLYFQDAFKVPLVIQLTDNEKCMWKNLSVEESQRLARENTKDIIACGFDISKTFIFSDFDYVGG
        L+P M + Y QDAFKVPLVIQLTD+EKCMWKNLSVEESQRLAREN KDIIACGFDISKTFIFSDFDYVGG
Subjt:  LLP-MQSLYFQDAFKVPLVIQLTDNEKCMWKNLSVEESQRLARENTKDIIACGFDISKTFIFSDFDYVGG

A0A6A3ARD2 Tryptophanyl-tRNA synthetase4.1e-2588.57Show/hide
Query:  LLP-MQSLYFQDAFKVPLVIQLTDNEKCMWKNLSVEESQRLARENTKDIIACGFDISKTFIFSDFDYVGG
        L+P M + Y QDAFKVPLVIQLTD+EKCMWKNLSVEESQRLAREN KDIIACGFDISKTFIFSDFDYVGG
Subjt:  LLP-MQSLYFQDAFKVPLVIQLTDNEKCMWKNLSVEESQRLARENTKDIIACGFDISKTFIFSDFDYVGG

SwissProt top hitse value%identityAlignment
P17248 Tryptophan--tRNA ligase, cytoplasmic1.5e-1663.93Show/hide
Query:  YFQDAFKVPLVIQLTDNEKCMWKNLSVEESQRLARENTKDIIACGFDISKTFIFSDFDYVG
        + QD F VPLVIQ+TD+EK +WK+L+++++   A EN KDIIACGFDI+KTFIFSD DY+G
Subjt:  YFQDAFKVPLVIQLTDNEKCMWKNLSVEESQRLARENTKDIIACGFDISKTFIFSDFDYVG

P23381 Tryptophan--tRNA ligase, cytoplasmic1.1e-1663.93Show/hide
Query:  YFQDAFKVPLVIQLTDNEKCMWKNLSVEESQRLARENTKDIIACGFDISKTFIFSDFDYVG
        + QD F VPLVIQ+TD+EK +WK+L+++++   A EN KDIIACGFDI+KTFIFSD DY+G
Subjt:  YFQDAFKVPLVIQLTDNEKCMWKNLSVEESQRLARENTKDIIACGFDISKTFIFSDFDYVG

P32921 Tryptophan--tRNA ligase, cytoplasmic1.3e-1560.66Show/hide
Query:  YFQDAFKVPLVIQLTDNEKCMWKNLSVEESQRLARENTKDIIACGFDISKTFIFSDFDYVG
        + QD F VPLVIQ++D+EK +WK+L++E++     EN KDIIACGFDI+KTFIFSD +Y+G
Subjt:  YFQDAFKVPLVIQLTDNEKCMWKNLSVEESQRLARENTKDIIACGFDISKTFIFSDFDYVG

Q5R4J1 Tryptophan--tRNA ligase, cytoplasmic1.1e-1663.93Show/hide
Query:  YFQDAFKVPLVIQLTDNEKCMWKNLSVEESQRLARENTKDIIACGFDISKTFIFSDFDYVG
        + QD F VPLVIQ+TD+EK +WK+L+++++   A EN KDIIACGFDI+KTFIFSD DY+G
Subjt:  YFQDAFKVPLVIQLTDNEKCMWKNLSVEESQRLARENTKDIIACGFDISKTFIFSDFDYVG

Q9SR15 Tryptophan--tRNA ligase, cytoplasmic3.9e-2581.43Show/hide
Query:  LLP-MQSLYFQDAFKVPLVIQLTDNEKCMWKNLSVEESQRLARENTKDIIACGFDISKTFIFSDFDYVGG
        L+P M + Y Q+AFKVPLVIQLTD+EK +WKNLSVEESQRLAREN KDIIACGFD++KTFIFSDFDYVGG
Subjt:  LLP-MQSLYFQDAFKVPLVIQLTDNEKCMWKNLSVEESQRLARENTKDIIACGFDISKTFIFSDFDYVGG

Arabidopsis top hitse value%identityAlignment
AT2G28890.1 poltergeist like 46.0e-0567.74Show/hide
Query:  KHLDDKQCIFNDRVKGRLKVTRAFGARFLKQ
        +H DD   + N+RVKG LKVTRAFGA FLKQ
Subjt:  KHLDDKQCIFNDRVKGRLKVTRAFGARFLKQ

AT2G35350.1 poltergeist like 11.7e-0780.65Show/hide
Query:  KHLDDKQCIFNDRVKGRLKVTRAFGARFLKQ
        +H DD  CI NDRVKGRLKVTRAFGA FLKQ
Subjt:  KHLDDKQCIFNDRVKGRLKVTRAFGARFLKQ

AT3G04600.1 Nucleotidylyl transferase superfamily protein2.8e-2681.43Show/hide
Query:  LLP-MQSLYFQDAFKVPLVIQLTDNEKCMWKNLSVEESQRLARENTKDIIACGFDISKTFIFSDFDYVGG
        L+P M + Y Q+AFKVPLVIQLTD+EK +WKNLSVEESQRLAREN KDIIACGFD++KTFIFSDFDYVGG
Subjt:  LLP-MQSLYFQDAFKVPLVIQLTDNEKCMWKNLSVEESQRLARENTKDIIACGFDISKTFIFSDFDYVGG

AT3G04600.2 Nucleotidylyl transferase superfamily protein2.8e-2681.43Show/hide
Query:  LLP-MQSLYFQDAFKVPLVIQLTDNEKCMWKNLSVEESQRLARENTKDIIACGFDISKTFIFSDFDYVGG
        L+P M + Y Q+AFKVPLVIQLTD+EK +WKNLSVEESQRLAREN KDIIACGFD++KTFIFSDFDYVGG
Subjt:  LLP-MQSLYFQDAFKVPLVIQLTDNEKCMWKNLSVEESQRLARENTKDIIACGFDISKTFIFSDFDYVGG

AT3G04600.3 Nucleotidylyl transferase superfamily protein2.8e-2681.43Show/hide
Query:  LLP-MQSLYFQDAFKVPLVIQLTDNEKCMWKNLSVEESQRLARENTKDIIACGFDISKTFIFSDFDYVGG
        L+P M + Y Q+AFKVPLVIQLTD+EK +WKNLSVEESQRLAREN KDIIACGFD++KTFIFSDFDYVGG
Subjt:  LLP-MQSLYFQDAFKVPLVIQLTDNEKCMWKNLSVEESQRLARENTKDIIACGFDISKTFIFSDFDYVGG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTAACACTCCCACCGCCCTTTCTCTCGCCTCCGATCAAACTCCGGTGTCCACAGAGAGTGTCGGCAGCTGCACTCCTCCCTCCCATCTCCGACGTCGTGTGCGTGC
GACCGACGTAGGTAGCAACGACAACAAGTTCTTCCGGTCTATTAAGAACATATTTTATTCTAAGCTAGAGAATCTTAGGTCGCTTTGCACTGGCGAGAAAGGAATTGCCC
CCAAAATCGGCATTCCGCTCCATTTCAAGGCCCCTGTTACATGTTTACGAGATGGCGAAGAGCAAGGTGGGAGTTGCATTTATGGGAGTAATGAGGCCAAAGTTAGTGAA
GAAGTCGATTATTTAGGTGGTTATGGCTTGAATTCAGGGCTATTTGGGTTCATGTATTTGTGTTGTGTTGTATTCGTGGATAACTTACCCCAAATTTGTAGCAATGACAA
CAGTTTGTCTCTCCAAATAGCAGCAACATCAACAATTTGCAATGGAGTTGCACTAAAAGTGTGGGGGATGTTGTTTCAGTTGGATTCTGTGGTTCATTTCCTTGTGGAGT
TATCAATTCTTCCTGAATTGCAAACTCCATATCAGTTGGCCTTATTGGAGATTGGTAAAGCTCAACCTTCTATTTCCTTCTCCATATGTATATCAAACAATGAGGTACTA
GGCCTGAAGCACCTAGATGACAAACAATGCATTTTCAATGATAGAGTGAAGGGTCGTCTAAAGGTTACGAGGGCATTTGGTGCAAGATTTTTGAAACAGTTTCTGGGAGG
GGGTTTCCACTACCCTGGCCTTAAAGGCTATTTTTTCTTCCTTCTGCCTATGCAATCTTTATATTTTCAAGATGCATTTAAGGTGCCCCTTGTGATACAACTCACTGACA
ATGAGAAGTGTATGTGGAAAAATCTCTCTGTGGAAGAGAGCCAGAGGCTTGCTCGTGAGAATACGAAAGATATCATTGCTTGTGGTTTTGATATTTCAAAAACCTTTATC
TTTTCTGATTTTGATTACGTTGGAGGGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGTAACACTCCCACCGCCCTTTCTCTCGCCTCCGATCAAACTCCGGTGTCCACAGAGAGTGTCGGCAGCTGCACTCCTCCCTCCCATCTCCGACGTCGTGTGCGTGC
GACCGACGTAGGTAGCAACGACAACAAGTTCTTCCGGTCTATTAAGAACATATTTTATTCTAAGCTAGAGAATCTTAGGTCGCTTTGCACTGGCGAGAAAGGAATTGCCC
CCAAAATCGGCATTCCGCTCCATTTCAAGGCCCCTGTTACATGTTTACGAGATGGCGAAGAGCAAGGTGGGAGTTGCATTTATGGGAGTAATGAGGCCAAAGTTAGTGAA
GAAGTCGATTATTTAGGTGGTTATGGCTTGAATTCAGGGCTATTTGGGTTCATGTATTTGTGTTGTGTTGTATTCGTGGATAACTTACCCCAAATTTGTAGCAATGACAA
CAGTTTGTCTCTCCAAATAGCAGCAACATCAACAATTTGCAATGGAGTTGCACTAAAAGTGTGGGGGATGTTGTTTCAGTTGGATTCTGTGGTTCATTTCCTTGTGGAGT
TATCAATTCTTCCTGAATTGCAAACTCCATATCAGTTGGCCTTATTGGAGATTGGTAAAGCTCAACCTTCTATTTCCTTCTCCATATGTATATCAAACAATGAGGTACTA
GGCCTGAAGCACCTAGATGACAAACAATGCATTTTCAATGATAGAGTGAAGGGTCGTCTAAAGGTTACGAGGGCATTTGGTGCAAGATTTTTGAAACAGTTTCTGGGAGG
GGGTTTCCACTACCCTGGCCTTAAAGGCTATTTTTTCTTCCTTCTGCCTATGCAATCTTTATATTTTCAAGATGCATTTAAGGTGCCCCTTGTGATACAACTCACTGACA
ATGAGAAGTGTATGTGGAAAAATCTCTCTGTGGAAGAGAGCCAGAGGCTTGCTCGTGAGAATACGAAAGATATCATTGCTTGTGGTTTTGATATTTCAAAAACCTTTATC
TTTTCTGATTTTGATTACGTTGGAGGGTGA
Protein sequenceShow/hide protein sequence
MGNTPTALSLASDQTPVSTESVGSCTPPSHLRRRVRATDVGSNDNKFFRSIKNIFYSKLENLRSLCTGEKGIAPKIGIPLHFKAPVTCLRDGEEQGGSCIYGSNEAKVSE
EVDYLGGYGLNSGLFGFMYLCCVVFVDNLPQICSNDNSLSLQIAATSTICNGVALKVWGMLFQLDSVVHFLVELSILPELQTPYQLALLEIGKAQPSISFSICISNNEVL
GLKHLDDKQCIFNDRVKGRLKVTRAFGARFLKQFLGGGFHYPGLKGYFFFLLPMQSLYFQDAFKVPLVIQLTDNEKCMWKNLSVEESQRLARENTKDIIACGFDISKTFI
FSDFDYVGG