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Lag0018017 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0018017
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Descriptiontranscription factor MYB3R-1-like
Genome locationchr5:13637388..13638771
RNA-Seq ExpressionLag0018017
SyntenyLag0018017
Gene Ontology termsGO:0006357 - regulation of transcription by RNA polymerase II (biological process)
GO:0005634 - nucleus (cellular component)
GO:0000978 - RNA polymerase II proximal promoter sequence-specific DNA binding (molecular function)
GO:0000981 - DNA-binding transcription factor activity, RNA polymerase II-specific (molecular function)
InterPro domainsIPR009057 - Homeobox-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022936405.1 transcription factor MYB3R-1-like isoform X1 [Cucurbita moschata]4.9e-1884.62Show/hide
Query:  QDEILQQAVDHFKGMNRKKIDGCFKDWTDVQCLHGWQKVLNPELAKGPWSKE
        +DEIL+QAVDHFKG N KKI GCFKD TDVQCLH WQKVLNPEL KGPWSKE
Subjt:  QDEILQQAVDHFKGMNRKKIDGCFKDWTDVQCLHGWQKVLNPELAKGPWSKE

XP_022936406.1 transcription factor MYB3R-1-like isoform X2 [Cucurbita moschata]4.9e-1884.62Show/hide
Query:  QDEILQQAVDHFKGMNRKKIDGCFKDWTDVQCLHGWQKVLNPELAKGPWSKE
        +DEIL+QAVDHFKG N KKI GCFKD TDVQCLH WQKVLNPEL KGPWSKE
Subjt:  QDEILQQAVDHFKGMNRKKIDGCFKDWTDVQCLHGWQKVLNPELAKGPWSKE

XP_022936407.1 transcription factor MYB3R-1-like isoform X3 [Cucurbita moschata]4.9e-1884.62Show/hide
Query:  QDEILQQAVDHFKGMNRKKIDGCFKDWTDVQCLHGWQKVLNPELAKGPWSKE
        +DEIL+QAVDHFKG N KKI GCFKD TDVQCLH WQKVLNPEL KGPWSKE
Subjt:  QDEILQQAVDHFKGMNRKKIDGCFKDWTDVQCLHGWQKVLNPELAKGPWSKE

XP_022976640.1 transcription factor MYB3R-1-like [Cucurbita maxima]4.9e-1884.62Show/hide
Query:  QDEILQQAVDHFKGMNRKKIDGCFKDWTDVQCLHGWQKVLNPELAKGPWSKE
        +DEIL+QAVDHFKG N KKI GCFKD TDVQCLH WQKVLNPEL KGPWSKE
Subjt:  QDEILQQAVDHFKGMNRKKIDGCFKDWTDVQCLHGWQKVLNPELAKGPWSKE

XP_023535442.1 transcription factor MYB3R-1-like [Cucurbita pepo subsp. pepo]4.9e-1884.62Show/hide
Query:  QDEILQQAVDHFKGMNRKKIDGCFKDWTDVQCLHGWQKVLNPELAKGPWSKE
        +DEIL+QAVDHFKG N KKI GCFKD TDVQCLH WQKVLNPEL KGPWSKE
Subjt:  QDEILQQAVDHFKGMNRKKIDGCFKDWTDVQCLHGWQKVLNPELAKGPWSKE

TrEMBL top hitse value%identityAlignment
A0A6J1BTC6 transcription factor MYB3R-1-like6.9e-1882.69Show/hide
Query:  QDEILQQAVDHFKGMNRKKIDGCFKDWTDVQCLHGWQKVLNPELAKGPWSKE
        +DEIL+QAVDHF+G N KKI GCFKD TDVQCLH WQKVLNPEL KGPWSKE
Subjt:  QDEILQQAVDHFKGMNRKKIDGCFKDWTDVQCLHGWQKVLNPELAKGPWSKE

A0A6J1F7D6 transcription factor MYB3R-1-like isoform X22.4e-1884.62Show/hide
Query:  QDEILQQAVDHFKGMNRKKIDGCFKDWTDVQCLHGWQKVLNPELAKGPWSKE
        +DEIL+QAVDHFKG N KKI GCFKD TDVQCLH WQKVLNPEL KGPWSKE
Subjt:  QDEILQQAVDHFKGMNRKKIDGCFKDWTDVQCLHGWQKVLNPELAKGPWSKE

A0A6J1F8D2 transcription factor MYB3R-1-like isoform X32.4e-1884.62Show/hide
Query:  QDEILQQAVDHFKGMNRKKIDGCFKDWTDVQCLHGWQKVLNPELAKGPWSKE
        +DEIL+QAVDHFKG N KKI GCFKD TDVQCLH WQKVLNPEL KGPWSKE
Subjt:  QDEILQQAVDHFKGMNRKKIDGCFKDWTDVQCLHGWQKVLNPELAKGPWSKE

A0A6J1FDJ7 transcription factor MYB3R-1-like isoform X12.4e-1884.62Show/hide
Query:  QDEILQQAVDHFKGMNRKKIDGCFKDWTDVQCLHGWQKVLNPELAKGPWSKE
        +DEIL+QAVDHFKG N KKI GCFKD TDVQCLH WQKVLNPEL KGPWSKE
Subjt:  QDEILQQAVDHFKGMNRKKIDGCFKDWTDVQCLHGWQKVLNPELAKGPWSKE

A0A6J1IK10 transcription factor MYB3R-1-like2.4e-1884.62Show/hide
Query:  QDEILQQAVDHFKGMNRKKIDGCFKDWTDVQCLHGWQKVLNPELAKGPWSKE
        +DEIL+QAVDHFKG N KKI GCFKD TDVQCLH WQKVLNPEL KGPWSKE
Subjt:  QDEILQQAVDHFKGMNRKKIDGCFKDWTDVQCLHGWQKVLNPELAKGPWSKE

SwissProt top hitse value%identityAlignment
Q0JHU7 Transcription factor MYB3R-27.6e-1463.46Show/hide
Query:  QDEILQQAVDHFKGMNRKKIDGCFKDWTDVQCLHGWQKVLNPELAKGPWSKE
        +DE L++AV+ +KG N KKI  CF   T+VQCLH WQKVLNPEL KGPW++E
Subjt:  QDEILQQAVDHFKGMNRKKIDGCFKDWTDVQCLHGWQKVLNPELAKGPWSKE

Q6R032 Transcription factor MYB3R-51.1e-1259.62Show/hide
Query:  QDEILQQAVDHFKGMNRKKIDGCFKDWTDVQCLHGWQKVLNPELAKGPWSKE
        +DE L++AV+ +KG   KKI   F + T+VQCLH WQKVLNPEL KGPW++E
Subjt:  QDEILQQAVDHFKGMNRKKIDGCFKDWTDVQCLHGWQKVLNPELAKGPWSKE

Q8H1P9 Transcription factor MYB3R-32.9e-1363.46Show/hide
Query:  QDEILQQAVDHFKGMNRKKIDGCFKDWTDVQCLHGWQKVLNPELAKGPWSKE
        +DE L+QAVD FKG + K I   F D T+VQCLH WQKVLNP+L KGPW+ E
Subjt:  QDEILQQAVDHFKGMNRKKIDGCFKDWTDVQCLHGWQKVLNPELAKGPWSKE

Q94FL9 Transcription factor MYB3R-43.7e-1662.9Show/hide
Query:  KAQRYKDATHQDEILQQAVDHFKGMNRKKIDGCFKDWTDVQCLHGWQKVLNPELAKGPWSKE
        ++ R +    +DEIL++AV  FKG N KKI   FKD TDVQCLH WQKVLNPEL KGPW+KE
Subjt:  KAQRYKDATHQDEILQQAVDHFKGMNRKKIDGCFKDWTDVQCLHGWQKVLNPELAKGPWSKE

Q9S7G7 Transcription factor MYB3R-14.3e-1773.08Show/hide
Query:  QDEILQQAVDHFKGMNRKKIDGCFKDWTDVQCLHGWQKVLNPELAKGPWSKE
        +DE+L +AV+ F+G N KKI  CFKD TDVQCLH WQKVLNPEL KGPWSKE
Subjt:  QDEILQQAVDHFKGMNRKKIDGCFKDWTDVQCLHGWQKVLNPELAKGPWSKE

Arabidopsis top hitse value%identityAlignment
AT2G13960.1 Homeodomain-like superfamily protein2.1e-1459.26Show/hide
Query:  QDEILQQAVDHFKGMNRKKIDGCFKDWTDVQCLHGWQKVLNPELAKGPWSKEVI
        +DE L++AV+ +KG   KKI   F + T VQCLH WQKVLNPEL KGPW++EV+
Subjt:  QDEILQQAVDHFKGMNRKKIDGCFKDWTDVQCLHGWQKVLNPELAKGPWSKEVI

AT4G32730.1 Homeodomain-like protein3.1e-1873.08Show/hide
Query:  QDEILQQAVDHFKGMNRKKIDGCFKDWTDVQCLHGWQKVLNPELAKGPWSKE
        +DE+L +AV+ F+G N KKI  CFKD TDVQCLH WQKVLNPEL KGPWSKE
Subjt:  QDEILQQAVDHFKGMNRKKIDGCFKDWTDVQCLHGWQKVLNPELAKGPWSKE

AT4G32730.2 Homeodomain-like protein3.1e-1873.08Show/hide
Query:  QDEILQQAVDHFKGMNRKKIDGCFKDWTDVQCLHGWQKVLNPELAKGPWSKE
        +DE+L +AV+ F+G N KKI  CFKD TDVQCLH WQKVLNPEL KGPWSKE
Subjt:  QDEILQQAVDHFKGMNRKKIDGCFKDWTDVQCLHGWQKVLNPELAKGPWSKE

AT5G11510.1 myb domain protein 3r-42.6e-1762.9Show/hide
Query:  KAQRYKDATHQDEILQQAVDHFKGMNRKKIDGCFKDWTDVQCLHGWQKVLNPELAKGPWSKE
        ++ R +    +DEIL++AV  FKG N KKI   FKD TDVQCLH WQKVLNPEL KGPW+KE
Subjt:  KAQRYKDATHQDEILQQAVDHFKGMNRKKIDGCFKDWTDVQCLHGWQKVLNPELAKGPWSKE

AT5G11510.2 myb domain protein 3r-42.6e-1762.9Show/hide
Query:  KAQRYKDATHQDEILQQAVDHFKGMNRKKIDGCFKDWTDVQCLHGWQKVLNPELAKGPWSKE
        ++ R +    +DEIL++AV  FKG N KKI   FKD TDVQCLH WQKVLNPEL KGPW+KE
Subjt:  KAQRYKDATHQDEILQQAVDHFKGMNRKKIDGCFKDWTDVQCLHGWQKVLNPELAKGPWSKE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCCGAGTTTGCAGTCGGACGAAAGTATCAATACTATTTGCCGAATGGTACTAGTTATGTGAGTCTGCACTGTGTTCTAAGATTGGCTCGCTTTAAGGCACAACGTTA
TAAAGATGCTACTCATCAGGATGAAATTTTGCAGCAAGCAGTTGATCATTTCAAAGGCATGAACCGGAAGAAAATAGATGGATGTTTCAAGGATTGGACTGATGTACAAT
GTCTGCATGGGTGGCAAAAGGTTTTGAATCCTGAACTTGCCAAAGGTCCATGGTCTAAAGAAGTGATTCACTTCTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCCGAGTTTGCAGTCGGACGAAAGTATCAATACTATTTGCCGAATGGTACTAGTTATGTGAGTCTGCACTGTGTTCTAAGATTGGCTCGCTTTAAGGCACAACGTTA
TAAAGATGCTACTCATCAGGATGAAATTTTGCAGCAAGCAGTTGATCATTTCAAAGGCATGAACCGGAAGAAAATAGATGGATGTTTCAAGGATTGGACTGATGTACAAT
GTCTGCATGGGTGGCAAAAGGTTTTGAATCCTGAACTTGCCAAAGGTCCATGGTCTAAAGAAGTGATTCACTTCTGA
Protein sequenceShow/hide protein sequence
MSEFAVGRKYQYYLPNGTSYVSLHCVLRLARFKAQRYKDATHQDEILQQAVDHFKGMNRKKIDGCFKDWTDVQCLHGWQKVLNPELAKGPWSKEVIHF