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Lag0018041 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0018041
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionNAD(P)H-quinone oxidoreductase subunit 2 B
Genome locationchr5:14384033..14385314
RNA-Seq ExpressionLag0018041
SyntenyLag0018041
Gene Ontology termsGO:0019684 - photosynthesis, light reaction (biological process)
GO:0009579 - thylakoid (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0005524 - ATP binding (molecular function)
GO:0016887 - ATPase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0034870.1 putative chloroplast RF2 [Cucumis melo var. makuwa]6.0e-2785.33Show/hide
Query:  ITEFTRPDSSPFLERLVPKSLNGADDLKANSHSLDREDRQDFVIRCRTYSFHFNGHSQHYALKRTRTSTLFRLRF
        + EFTRPDS+PFLER VPKSLNGADD KA+SHSLDREDRQDFVIRCRT SF FNGHSQ YALKRTRTSTLF  RF
Subjt:  ITEFTRPDSSPFLERLVPKSLNGADDLKANSHSLDREDRQDFVIRCRTYSFHFNGHSQHYALKRTRTSTLFRLRF

KAA0063018.1 putative chloroplast RF21 [Cucumis melo var. makuwa]1.7e-3791.01Show/hide
Query:  ALKGEGRLECQQASITEFTRPDSSPFLERLVPKSLNGADDLKANSHSLDREDRQDFVIRCRTYSFHFNGHSQHYALKRTRTSTLFRLRF
        ALKGEGRLECQQASI EFTRPDS+PFLER VPKSLNGADD KA+SHSLDREDRQDFVIRCRTYSF FNGHSQHYALKRTRTSTLF  RF
Subjt:  ALKGEGRLECQQASITEFTRPDSSPFLERLVPKSLNGADDLKANSHSLDREDRQDFVIRCRTYSFHFNGHSQHYALKRTRTSTLFRLRF

KAF1888222.1 hypothetical protein Lal_00043036 [Lupinus albus]1.9e-1257.14Show/hide
Query:  ALKGEGRLECQQASITEFTRPDSS-PFLERLVPKSLNGADDLKANSHSLDREDRQDFVIRCRTYS-FHFNGHSQHYALKRTRTSTLFRLRF
        ALKGEGRLE QQASI ++TRP+S  P L     K   G    K N HSLDRED QDFV R    + F  N  SQ+YALKR RTS LF  RF
Subjt:  ALKGEGRLECQQASITEFTRPDSS-PFLERLVPKSLNGADDLKANSHSLDREDRQDFVIRCRTYS-FHFNGHSQHYALKRTRTSTLFRLRF

TYK11859.1 NAD(P)H-quinone oxidoreductase subunit 2 B [Cucumis melo var. makuwa]5.5e-2079.1Show/hide
Query:  AYLLPKQALKGEGRLECQQASITEFTRPDSSPFLERLVPKSLNGADDLKANSHSLDREDRQDFVIRC
        A ++   ALKGE RLECQQASI EFTRPDS+PFLER +PKSLNGADD KA+SHSLDRE RQDFVIRC
Subjt:  AYLLPKQALKGEGRLECQQASITEFTRPDSSPFLERLVPKSLNGADDLKANSHSLDREDRQDFVIRC

TrEMBL top hitse value%identityAlignment
A0A5A7SV73 Putative chloroplast RF2 (Plastid)2.9e-2785.33Show/hide
Query:  ITEFTRPDSSPFLERLVPKSLNGADDLKANSHSLDREDRQDFVIRCRTYSFHFNGHSQHYALKRTRTSTLFRLRF
        + EFTRPDS+PFLER VPKSLNGADD KA+SHSLDREDRQDFVIRCRT SF FNGHSQ YALKRTRTSTLF  RF
Subjt:  ITEFTRPDSSPFLERLVPKSLNGADDLKANSHSLDREDRQDFVIRCRTYSFHFNGHSQHYALKRTRTSTLFRLRF

A0A5A7V5X1 Putative chloroplast RF218.2e-3891.01Show/hide
Query:  ALKGEGRLECQQASITEFTRPDSSPFLERLVPKSLNGADDLKANSHSLDREDRQDFVIRCRTYSFHFNGHSQHYALKRTRTSTLFRLRF
        ALKGEGRLECQQASI EFTRPDS+PFLER VPKSLNGADD KA+SHSLDREDRQDFVIRCRTYSF FNGHSQHYALKRTRTSTLF  RF
Subjt:  ALKGEGRLECQQASITEFTRPDSSPFLERLVPKSLNGADDLKANSHSLDREDRQDFVIRCRTYSFHFNGHSQHYALKRTRTSTLFRLRF

A0A5D3CNN5 NAD(P)H-quinone oxidoreductase subunit 2 B2.6e-2079.1Show/hide
Query:  AYLLPKQALKGEGRLECQQASITEFTRPDSSPFLERLVPKSLNGADDLKANSHSLDREDRQDFVIRC
        A ++   ALKGE RLECQQASI EFTRPDS+PFLER +PKSLNGADD KA+SHSLDRE RQDFVIRC
Subjt:  AYLLPKQALKGEGRLECQQASITEFTRPDSSPFLERLVPKSLNGADDLKANSHSLDREDRQDFVIRC

A0A6A5NV56 Uncharacterized protein9.1e-1357.14Show/hide
Query:  ALKGEGRLECQQASITEFTRPDSS-PFLERLVPKSLNGADDLKANSHSLDREDRQDFVIRCRTYS-FHFNGHSQHYALKRTRTSTLFRLRF
        ALKGEGRLE QQASI ++TRP+S  P L     K   G    K N HSLDRED QDFV R    + F  N  SQ+YALKR RTS LF  RF
Subjt:  ALKGEGRLECQQASITEFTRPDSS-PFLERLVPKSLNGADDLKANSHSLDREDRQDFVIRCRTYS-FHFNGHSQHYALKRTRTSTLFRLRF

A0A6N2M1N4 Protein Ycf24.0e-0851.95Show/hide
Query:  KQALKG--EGRLECQQASITEFTRPDSSPF---------LERLVPKSLNGADDLKANSHSLDREDRQDFVIRCRTYS
        ++ALKG  EGRLECQQ  I EFTRPD             +E +    + G    K   HSLDRED QDFVIRCRTYS
Subjt:  KQALKG--EGRLECQQASITEFTRPDSSPF---------LERLVPKSLNGADDLKANSHSLDREDRQDFVIRCRTYS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGAGATGTCAAAGGGCCTACTTACTTCCCAAACAGGCCCTGAAAGGAGAAGGAAGACTGGAATGCCAACAGGCGTCTATTACTGAATTCACCAGACCCGATAGTAG
CCCATTTTTGGAACGTCTAGTGCCAAAGTCACTGAATGGGGCAGACGATTTAAAAGCGAACTCCCATTCATTAGATAGAGAAGATCGCCAAGATTTCGTGATCCGCTGCC
GAACTTATTCCTTCCACTTCAACGGGCATTCTCAACATTATGCCTTGAAGAGGACTCGAACCTCCACGCTCTTTAGACTGAGATTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGAAGAGATGTCAAAGGGCCTACTTACTTCCCAAACAGGCCCTGAAAGGAGAAGGAAGACTGGAATGCCAACAGGCGTCTATTACTGAATTCACCAGACCCGATAGTAG
CCCATTTTTGGAACGTCTAGTGCCAAAGTCACTGAATGGGGCAGACGATTTAAAAGCGAACTCCCATTCATTAGATAGAGAAGATCGCCAAGATTTCGTGATCCGCTGCC
GAACTTATTCCTTCCACTTCAACGGGCATTCTCAACATTATGCCTTGAAGAGGACTCGAACCTCCACGCTCTTTAGACTGAGATTTTGA
Protein sequenceShow/hide protein sequence
MKRCQRAYLLPKQALKGEGRLECQQASITEFTRPDSSPFLERLVPKSLNGADDLKANSHSLDREDRQDFVIRCRTYSFHFNGHSQHYALKRTRTSTLFRLRF