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Lag0018042 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0018042
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr5:14511310..14511726
RNA-Seq ExpressionLag0018042
SyntenyLag0018042
Gene Ontology termsNA
InterPro domainsIPR036691 - Endonuclease/exonuclease/phosphatase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022155286.1 uncharacterized protein LOC111022423 [Momordica charantia]1.6e-2744.68Show/hide
Query:  MPWILGGDFNEIMDSTEKMGGLDRMESDMREIREAIDVCEVFDPGVTGPKYTWCNNHVNHGVIWEKLDRFLINPNMKIRCSVFRVHHLPRVASDHRLLLV
        +PWILGGDFNEI+ ++EK+ G+ R +S M+  ++ +D+C + DPG  G  +TWC+ H     IWE+LDRFLIN  +        + HL  +ASDHR +L 
Subjt:  MPWILGGDFNEIMDSTEKMGGLDRMESDMREIREAIDVCEVFDPGVTGPKYTWCNNHVNHGVIWEKLDRFLINPNMKIRCSVFRVHHLPRVASDHRLLLV

Query:  EW---KKEPLDPRKETLRRPKRFEESWMKYDVCREIVEQVW
        EW    +  +  RK   RRP RFEE W  +  C+EIV +VW
Subjt:  EW---KKEPLDPRKETLRRPKRFEESWMKYDVCREIVEQVW

XP_023871634.1 uncharacterized protein LOC111984238 [Quercus suber]1.1e-2036.96Show/hide
Query:  MPWILGGDFNEIMDSTEKMGGLDRMESDMREIREAIDVCEVFDPGVTGPKYTWCNNHVNHGVIWEKLDRFLINPNMKIRCSVFRVHHLPRVASDHRLLLV
        +PWI  GDFNEI+ + EK+GG  R    M E R+ +D C   D G  G K+TWCN H     +WE++DR +   +        +V HL    SDH+ +L+
Subjt:  MPWILGGDFNEIMDSTEKMGGLDRMESDMREIREAIDVCEVFDPGVTGPKYTWCNNHVNHGVIWEKLDRFLINPNMKIRCSVFRVHHLPRVASDHRLLLV

Query:  EWKKEPLDPRKETLRRPKRFEESWMKYDVCREIVEQVW
             P     + + +P RFE+ WM+ + CRE++E  W
Subjt:  EWKKEPLDPRKETLRRPKRFEESWMKYDVCREIVEQVW

XP_023908468.1 uncharacterized protein LOC112020138 [Quercus suber]2.5e-2039.13Show/hide
Query:  MPWILGGDFNEIMDSTEKMGGLDRMESDMREIREAIDVCEVFDPGVTGPKYTWCNNHVNHGVIWEKLDRFLINPNMKIRCSVFRVHHLPRVASDHRLLLV
        +PW+  GDFNEI  S EK+GG  R    M E R+ +D C   D G TG K+TWCN H +   IWE+LDR +       +    +V HL   +SDH+ +L+
Subjt:  MPWILGGDFNEIMDSTEKMGGLDRMESDMREIREAIDVCEVFDPGVTGPKYTWCNNHVNHGVIWEKLDRFLINPNMKIRCSVFRVHHLPRVASDHRLLLV

Query:  EWKKEPLDPRKETLRRPKRFEESWMKYDVCREIVEQVW
          K  P     +  ++P RFE  W++ + CR+ VE  W
Subjt:  EWKKEPLDPRKETLRRPKRFEESWMKYDVCREIVEQVW

XP_030940157.1 uncharacterized protein LOC115965098 [Quercus lobata]5.1e-2139.13Show/hide
Query:  MPWILGGDFNEIMDSTEKMGGLDRMESDMREIREAIDVCEVFDPGVTGPKYTWCNNHVNHGVIWEKLDRFLINPNMKIRCSVFRVHHLPRVASDHRLLLV
        +PW+  GDFNE++ S+EK+GG +R ++ M+  R+ +D C   D G  GP+YTW  +  +   IWE+LDR   N    +  +  +VHHL    SDHR L +
Subjt:  MPWILGGDFNEIMDSTEKMGGLDRMESDMREIREAIDVCEVFDPGVTGPKYTWCNNHVNHGVIWEKLDRFLINPNMKIRCSVFRVHHLPRVASDHRLLLV

Query:  EWKKEPLDPRKETLRRPKRFEESWMKYDVCREIVEQVW
          +     P      +P RFEE W+    C EIVE VW
Subjt:  EWKKEPLDPRKETLRRPKRFEESWMKYDVCREIVEQVW

XP_038976453.1 uncharacterized protein LOC120107308 [Phoenix dactylifera]2.5e-2038.85Show/hide
Query:  MPWILGGDFNEIMDSTEKMGGLDRME-SDMREIREAIDVCEVFDPGVTGPKYTWCNNHVNHGVIWEKLDRFLINPNMKIRCSVFRVHHLPRVASDHRLLL
        +P ++ GDFN I+ S++K GG   M+ +D RE R+ +    + D G +GP++TWCNN +    +WE+LDR   +P+  +R S  RV HLPR+ASDH  LL
Subjt:  MPWILGGDFNEIMDSTEKMGGLDRME-SDMREIREAIDVCEVFDPGVTGPKYTWCNNHVNHGVIWEKLDRFLINPNMKIRCSVFRVHHLPRVASDHRLLL

Query:  VEWKKEPLDPRKETLRRPKRFEESWMKYDVCREIVEQVW
        +     P      +   P RFE+ W+ Y    +IV + W
Subjt:  VEWKKEPLDPRKETLRRPKRFEESWMKYDVCREIVEQVW

TrEMBL top hitse value%identityAlignment
A0A2N9FVV5 Reverse transcriptase domain-containing protein3.5e-2339.13Show/hide
Query:  MPWILGGDFNEIMDSTEKMGGLDRMESDMREIREAIDVCEVFDPGVTGPKYTWCNNHVNHGVIWEKLDRFLINPNMKIRCSVFRVHHLPRVASDHRLLLV
        +PW   GDFNE++   EK GG  R ES M+  R+ +D C   D G  GPK+TWCNN +N   +WE+LDR ++N    I+   +RVHH+    SDH  L +
Subjt:  MPWILGGDFNEIMDSTEKMGGLDRMESDMREIREAIDVCEVFDPGVTGPKYTWCNNHVNHGVIWEKLDRFLINPNMKIRCSVFRVHHLPRVASDHRLLLV

Query:  EWKKEPLDPRKETLRRPKRFEESWMKYDVCREIVEQVW
             P   R    R+  RFE  W+  + C++ +E  W
Subjt:  EWKKEPLDPRKETLRRPKRFEESWMKYDVCREIVEQVW

A0A2N9G3W9 Uncharacterized protein1.7e-2240.85Show/hide
Query:  MPWILGGDFNEIMDSTEKMGGLDRMESDMREIREAIDVCEVFDPGVTGPKYTWCNNHVNHGVIWEKLDRFLINPNMKIRCSVFRVHHLPRVASDHRLLLV
        +PW+  GDFNE++ S EK G   R E+ MR+ R+ +D C   D G +GP +TWCNN +    + E+LDR L   +  +R    RVH++P V SDH  L +
Subjt:  MPWILGGDFNEIMDSTEKMGGLDRMESDMREIREAIDVCEVFDPGVTGPKYTWCNNHVNHGVIWEKLDRFLINPNMKIRCSVFRVHHLPRVASDHRLLLV

Query:  EWKKEPLDPRKETLRRPK----RFEESWMKYDVCREIVEQVW
        E     L+P K   R+PK    RFEE W     C + V+Q W
Subjt:  EWKKEPLDPRKETLRRPK----RFEESWMKYDVCREIVEQVW

A0A2N9H727 Uncharacterized protein1.4e-2442.75Show/hide
Query:  MPWILGGDFNEIMDSTEKMGGLDRMESDMREIREAIDVCEVFDPGVTGPKYTWCNNHVNHGVIWEKLDRFLINPNMKIRCSVFRVHHLPRVASDHRLLLV
        +PW+  GDFNE++ S+EK G   R E+ M   R+ +D C   D G TGP +TWCNNH+    + E+LDR L   +  +R S  RVHHL  V SDH  L +
Subjt:  MPWILGGDFNEIMDSTEKMGGLDRMESDMREIREAIDVCEVFDPGVTGPKYTWCNNHVNHGVIWEKLDRFLINPNMKIRCSVFRVHHLPRVASDHRLLLV

Query:  EWKKEPLDPRKETLRRPKRFEESWMKYDVCREIVEQVW
        E   +  DPR +  R+  RFEE W     C E ++Q W
Subjt:  EWKKEPLDPRKETLRRPKRFEESWMKYDVCREIVEQVW

A0A2N9IIR5 Uncharacterized protein2.2e-2236.96Show/hide
Query:  MPWILGGDFNEIMDSTEKMGGLDRMESDMREIREAIDVCEVFDPGVTGPKYTWCNNHVNHGVIWEKLDRFLINPNMKIRCSVFRVHHLPRVASDHRLLLV
        +PW   GDFNE++  +EK GG  R ++ M+  R+ +D C   D G  GP++TWCNN +N   +WE+LDR ++N    +R     V+H+    SDH  L +
Subjt:  MPWILGGDFNEIMDSTEKMGGLDRMESDMREIREAIDVCEVFDPGVTGPKYTWCNNHVNHGVIWEKLDRFLINPNMKIRCSVFRVHHLPRVASDHRLLLV

Query:  EWKKEPLDPRKETLRRPKRFEESWMKYDVCREIVEQVW
              + PRK+      RFE  W+  + CR  VE  W
Subjt:  EWKKEPLDPRKETLRRPKRFEESWMKYDVCREIVEQVW

A0A6J1DRA0 uncharacterized protein LOC1110224237.9e-2844.68Show/hide
Query:  MPWILGGDFNEIMDSTEKMGGLDRMESDMREIREAIDVCEVFDPGVTGPKYTWCNNHVNHGVIWEKLDRFLINPNMKIRCSVFRVHHLPRVASDHRLLLV
        +PWILGGDFNEI+ ++EK+ G+ R +S M+  ++ +D+C + DPG  G  +TWC+ H     IWE+LDRFLIN  +        + HL  +ASDHR +L 
Subjt:  MPWILGGDFNEIMDSTEKMGGLDRMESDMREIREAIDVCEVFDPGVTGPKYTWCNNHVNHGVIWEKLDRFLINPNMKIRCSVFRVHHLPRVASDHRLLLV

Query:  EW---KKEPLDPRKETLRRPKRFEESWMKYDVCREIVEQVW
        EW    +  +  RK   RRP RFEE W  +  C+EIV +VW
Subjt:  EW---KKEPLDPRKETLRRPKRFEESWMKYDVCREIVEQVW

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCTTGGATCCTTGGAGGCGATTTCAATGAGATAATGGATAGTACCGAGAAGATGGGTGGTTTAGATCGTATGGAGTCGGATATGCGTGAAATCCGTGAGGCTATTGA
TGTGTGTGAGGTCTTTGATCCGGGGGTTACTGGCCCAAAATATACATGGTGTAATAATCATGTTAACCATGGAGTTATTTGGGAGAAGCTGGATAGATTCTTGATTAACC
CGAACATGAAAATTCGATGTAGTGTTTTTAGAGTCCATCATTTGCCTCGTGTGGCTTCGGATCACCGACTTTTATTGGTTGAGTGGAAGAAAGAGCCACTGGACCCAAGG
AAGGAAACTTTAAGACGTCCTAAAAGATTTGAGGAGAGTTGGATGAAGTATGATGTTTGTAGAGAGATTGTAGAGCAAGTTTGGTAG
mRNA sequenceShow/hide mRNA sequence
ATGCCTTGGATCCTTGGAGGCGATTTCAATGAGATAATGGATAGTACCGAGAAGATGGGTGGTTTAGATCGTATGGAGTCGGATATGCGTGAAATCCGTGAGGCTATTGA
TGTGTGTGAGGTCTTTGATCCGGGGGTTACTGGCCCAAAATATACATGGTGTAATAATCATGTTAACCATGGAGTTATTTGGGAGAAGCTGGATAGATTCTTGATTAACC
CGAACATGAAAATTCGATGTAGTGTTTTTAGAGTCCATCATTTGCCTCGTGTGGCTTCGGATCACCGACTTTTATTGGTTGAGTGGAAGAAAGAGCCACTGGACCCAAGG
AAGGAAACTTTAAGACGTCCTAAAAGATTTGAGGAGAGTTGGATGAAGTATGATGTTTGTAGAGAGATTGTAGAGCAAGTTTGGTAG
Protein sequenceShow/hide protein sequence
MPWILGGDFNEIMDSTEKMGGLDRMESDMREIREAIDVCEVFDPGVTGPKYTWCNNHVNHGVIWEKLDRFLINPNMKIRCSVFRVHHLPRVASDHRLLLVEWKKEPLDPR
KETLRRPKRFEESWMKYDVCREIVEQVW