; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0018049 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0018049
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRibonuclease H
Genome locationchr5:14657554..14659020
RNA-Seq ExpressionLag0018049
SyntenyLag0018049
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022147761.1 uncharacterized protein LOC111016619 [Momordica charantia]1.8e-2134.13Show/hide
Query:  MKAEVPQKFKVPTFKQYDGKKDPVQHLNAYRSWMDFHGVSDAIR------------------------------------------EQRKPHINLLTVKQ
        MK +VP KFK+P  K+YDG  DP+ HL+ Y  W D +G+++AIR                                           + +P   LLT+KQ
Subjt:  MKAEVPQKFKVPTFKQYDGKKDPVQHLNAYRSWMDFHGVSDAIR------------------------------------------EQRKPHINLLTVKQ

Query:  QPCESLRDYITRFNDEALQVEGYSEVAALLAITAGLEDERLLNSIGKSQPRTYAEFVSRAQKYMSADELLKSKRSER----EYKRSSSSDHDSKKDKRQR
        +  ESL+DY+ RFN E LQVEG ++   LL   +G++DE+L+ S GK    T++E  SRAQ YMS  EL+ SKR  +    +Y        + +   R  
Subjt:  QPCESLRDYITRFNDEALQVEGYSEVAALLAITAGLEDERLLNSIGKSQPRTYAEFVSRAQKYMSADELLKSKRSER----EYKRSSSSDHDSKKDKRQR

Query:  TDERGRGR
          + G+GR
Subjt:  TDERGRGR

XP_022150035.1 uncharacterized protein LOC111018307 [Momordica charantia]6.1e-2538.76Show/hide
Query:  EEDMKAEVPQKFKVPTFKQYDGKKDPVQHLNAYRSWMDFHGVSDAI------------------------------------------REQRKPHINLLT
        EE MK +VP KFK+PT KQ+DG  D V HL+AYR WMD +GVS+A+                                          R + +P   LLT
Subjt:  EEDMKAEVPQKFKVPTFKQYDGKKDPVQHLNAYRSWMDFHGVSDAI------------------------------------------REQRKPHINLLT

Query:  VKQQPCESLRDYITRFNDEALQVEGYSEVAALLAITAGLEDERLLNSIGKSQPRTYAEFVSRAQKYMSADELLKSKR------SEREYKRSSSSDHDSKK
        +KQ+  ESL DY+ RFN+E LQVEG +   +L+A  + + DE L  S GK  P T++E +SRAQKYMSA E   SKR      S++  +RS      S+ 
Subjt:  VKQQPCESLRDYITRFNDEALQVEGYSEVAALLAITAGLEDERLLNSIGKSQPRTYAEFVSRAQKYMSADELLKSKR------SEREYKRSSSSDHDSKK

Query:  DKRQRTDER
        +KR R+  +
Subjt:  DKRQRTDER

XP_022158344.1 uncharacterized protein LOC111024851 [Momordica charantia]5.7e-2335.58Show/hide
Query:  MKAEVPQKFKVPTFKQYDGKKDPVQHLNAYRSWMDFHGVSDAI------------------------------------------REQRKPHINLLTVKQ
        MK +   KFK+P   +YDG  DP+ HL+AYR W D + + +AI                                          R + KP   LLT+KQ
Subjt:  MKAEVPQKFKVPTFKQYDGKKDPVQHLNAYRSWMDFHGVSDAI------------------------------------------REQRKPHINLLTVKQ

Query:  QPCESLRDYITRFNDEALQVEGYSEVAALLAITAGLEDERLLNSIGKSQPRTYAEFVSRAQKYMSADELLKSKRSEREYKRSSSSDHDSKKDKRQRT---
        +  ESL++Y+ RFN+E LQVEG ++  AL+A  +G++DERL+ S GK  P T+ E +SRAQKYMSA EL+   R     + + S+  + + +KR R+   
Subjt:  QPCESLRDYITRFNDEALQVEGYSEVAALLAITAGLEDERLLNSIGKSQPRTYAEFVSRAQKYMSADELLKSKRSEREYKRSSSSDHDSKKDKRQRT---

Query:  -DERGRGR
          + G GR
Subjt:  -DERGRGR

XP_022158830.1 uncharacterized protein LOC111025293 [Momordica charantia]4.8e-3032.68Show/hide
Query:  GRPQTESPQPRSPLPSSREKQSDLKFAALENKVSAMDHNLSRILRILDKPGPSTKTPDERLVRDPRKGKEPMEHTAESETRSKGKKTDSMTISTPSYGHN
        G PQ   P+  +  P ++E+Q  L     E           +   +L+      ++ +  LVRDP+KGK P E   E  T S G K           G N
Subjt:  GRPQTESPQPRSPLPSSREKQSDLKFAALENKVSAMDHNLSRILRILDKPGPSTKTPDERLVRDPRKGKEPMEHTAESETRSKGKKTDSMTISTPSYGHN

Query:  KTDLRNLIVEKRRSAKTAESKAKAAEAEARAAEAEARAAEAEARLAEAEAKKDNLPWKTELLNTLKELGNPQGDLQKSKDLGDQNLEELADQVDLPFTEE
         T  R  I + R++ K  +S A         ++ + R +E    ++  + K  + P  +E  ++ KE G               +LEEL DQ D PFTEE
Subjt:  KTDLRNLIVEKRRSAKTAESKAKAAEAEARAAEAEARAAEAEARLAEAEAKKDNLPWKTELLNTLKELGNPQGDLQKSKDLGDQNLEELADQVDLPFTEE

Query:  DMKAEVPQKFKVPTFKQYDGKKDPVQHLNAYRSWMDFHGVSDAI------------------------------------------REQRKPHINLLTVK
         M+ +VP KFK+PT KQ+D   DPV HL+AYR WMD +GVS+A+                                          R + +P   LLT+K
Subjt:  DMKAEVPQKFKVPTFKQYDGKKDPVQHLNAYRSWMDFHGVSDAI------------------------------------------REQRKPHINLLTVK

Query:  QQPCESLRDYITRFNDEALQVEGYSEVAALLAITAGLEDERLLNSIGKSQPRTYAEFVSRAQKYMSADELLKS------KRSEREYKRSSSSDHDSKKDK
        Q+  ESLRDY+ RFN+E LQVEG ++  +LLA  +G+ DE L  S GK  P T++E +SRAQ+YMSA E   S      KR++ + +RS      S+ +K
Subjt:  QQPCESLRDYITRFNDEALQVEGYSEVAALLAITAGLEDERLLNSIGKSQPRTYAEFVSRAQKYMSADELLKS------KRSEREYKRSSSSDHDSKKDK

Query:  RQRTDER
        R R+ ++
Subjt:  RQRTDER

XP_022159109.1 uncharacterized protein LOC111025548 [Momordica charantia]1.8e-2937.96Show/hide
Query:  LNTLKELGNPQGDLQK--SKDLGDQNLEELADQVDLPFTEEDMKAEVPQKFKVPTFKQYDGKKDPVQHLNAYRSWMDFHGVSDAI---------------
        LN  K +  P+   ++   K+ G  +LEEL  Q D PFTEE M+ +VP KFK+PT K +DG  +PV HL+AYR WMD +GVSDAI               
Subjt:  LNTLKELGNPQGDLQK--SKDLGDQNLEELADQVDLPFTEEDMKAEVPQKFKVPTFKQYDGKKDPVQHLNAYRSWMDFHGVSDAI---------------

Query:  ---------------------------REQRKPHINLLTVKQQPCESLRDYITRFNDEALQVEGYSEVAALLAITAGLEDERLLNSIGKSQPRTYAEFVS
                                   R + +P   LLT+KQ+  ESL DY+ RFN+E LQ+EG ++  +LLA  +G+ DE L  S  K  P T++E +S
Subjt:  ---------------------------REQRKPHINLLTVKQQPCESLRDYITRFNDEALQVEGYSEVAALLAITAGLEDERLLNSIGKSQPRTYAEFVS

Query:  RAQKYMSADELLKSKRSEREYKRSSSSDHDSKKDKRQRTDERGRG
        RAQ+YMSA E   SKR     +     +    K +  R ++R RG
Subjt:  RAQKYMSADELLKSKRSEREYKRSSSSDHDSKKDKRQRTDERGRG

TrEMBL top hitse value%identityAlignment
A0A6J1D3B7 uncharacterized protein LOC1110166198.9e-2234.13Show/hide
Query:  MKAEVPQKFKVPTFKQYDGKKDPVQHLNAYRSWMDFHGVSDAIR------------------------------------------EQRKPHINLLTVKQ
        MK +VP KFK+P  K+YDG  DP+ HL+ Y  W D +G+++AIR                                           + +P   LLT+KQ
Subjt:  MKAEVPQKFKVPTFKQYDGKKDPVQHLNAYRSWMDFHGVSDAIR------------------------------------------EQRKPHINLLTVKQ

Query:  QPCESLRDYITRFNDEALQVEGYSEVAALLAITAGLEDERLLNSIGKSQPRTYAEFVSRAQKYMSADELLKSKRSER----EYKRSSSSDHDSKKDKRQR
        +  ESL+DY+ RFN E LQVEG ++   LL   +G++DE+L+ S GK    T++E  SRAQ YMS  EL+ SKR  +    +Y        + +   R  
Subjt:  QPCESLRDYITRFNDEALQVEGYSEVAALLAITAGLEDERLLNSIGKSQPRTYAEFVSRAQKYMSADELLKSKRSER----EYKRSSSSDHDSKKDKRQR

Query:  TDERGRGR
          + G+GR
Subjt:  TDERGRGR

A0A6J1D7D2 uncharacterized protein LOC1110183072.9e-2538.76Show/hide
Query:  EEDMKAEVPQKFKVPTFKQYDGKKDPVQHLNAYRSWMDFHGVSDAI------------------------------------------REQRKPHINLLT
        EE MK +VP KFK+PT KQ+DG  D V HL+AYR WMD +GVS+A+                                          R + +P   LLT
Subjt:  EEDMKAEVPQKFKVPTFKQYDGKKDPVQHLNAYRSWMDFHGVSDAI------------------------------------------REQRKPHINLLT

Query:  VKQQPCESLRDYITRFNDEALQVEGYSEVAALLAITAGLEDERLLNSIGKSQPRTYAEFVSRAQKYMSADELLKSKR------SEREYKRSSSSDHDSKK
        +KQ+  ESL DY+ RFN+E LQVEG +   +L+A  + + DE L  S GK  P T++E +SRAQKYMSA E   SKR      S++  +RS      S+ 
Subjt:  VKQQPCESLRDYITRFNDEALQVEGYSEVAALLAITAGLEDERLLNSIGKSQPRTYAEFVSRAQKYMSADELLKSKR------SEREYKRSSSSDHDSKK

Query:  DKRQRTDER
        +KR R+  +
Subjt:  DKRQRTDER

A0A6J1DWY0 uncharacterized protein LOC1110252932.3e-3032.68Show/hide
Query:  GRPQTESPQPRSPLPSSREKQSDLKFAALENKVSAMDHNLSRILRILDKPGPSTKTPDERLVRDPRKGKEPMEHTAESETRSKGKKTDSMTISTPSYGHN
        G PQ   P+  +  P ++E+Q  L     E           +   +L+      ++ +  LVRDP+KGK P E   E  T S G K           G N
Subjt:  GRPQTESPQPRSPLPSSREKQSDLKFAALENKVSAMDHNLSRILRILDKPGPSTKTPDERLVRDPRKGKEPMEHTAESETRSKGKKTDSMTISTPSYGHN

Query:  KTDLRNLIVEKRRSAKTAESKAKAAEAEARAAEAEARAAEAEARLAEAEAKKDNLPWKTELLNTLKELGNPQGDLQKSKDLGDQNLEELADQVDLPFTEE
         T  R  I + R++ K  +S A         ++ + R +E    ++  + K  + P  +E  ++ KE G               +LEEL DQ D PFTEE
Subjt:  KTDLRNLIVEKRRSAKTAESKAKAAEAEARAAEAEARAAEAEARLAEAEAKKDNLPWKTELLNTLKELGNPQGDLQKSKDLGDQNLEELADQVDLPFTEE

Query:  DMKAEVPQKFKVPTFKQYDGKKDPVQHLNAYRSWMDFHGVSDAI------------------------------------------REQRKPHINLLTVK
         M+ +VP KFK+PT KQ+D   DPV HL+AYR WMD +GVS+A+                                          R + +P   LLT+K
Subjt:  DMKAEVPQKFKVPTFKQYDGKKDPVQHLNAYRSWMDFHGVSDAI------------------------------------------REQRKPHINLLTVK

Query:  QQPCESLRDYITRFNDEALQVEGYSEVAALLAITAGLEDERLLNSIGKSQPRTYAEFVSRAQKYMSADELLKS------KRSEREYKRSSSSDHDSKKDK
        Q+  ESLRDY+ RFN+E LQVEG ++  +LLA  +G+ DE L  S GK  P T++E +SRAQ+YMSA E   S      KR++ + +RS      S+ +K
Subjt:  QQPCESLRDYITRFNDEALQVEGYSEVAALLAITAGLEDERLLNSIGKSQPRTYAEFVSRAQKYMSADELLKS------KRSEREYKRSSSSDHDSKKDK

Query:  RQRTDER
        R R+ ++
Subjt:  RQRTDER

A0A6J1DZ49 uncharacterized protein LOC1110248512.8e-2335.58Show/hide
Query:  MKAEVPQKFKVPTFKQYDGKKDPVQHLNAYRSWMDFHGVSDAI------------------------------------------REQRKPHINLLTVKQ
        MK +   KFK+P   +YDG  DP+ HL+AYR W D + + +AI                                          R + KP   LLT+KQ
Subjt:  MKAEVPQKFKVPTFKQYDGKKDPVQHLNAYRSWMDFHGVSDAI------------------------------------------REQRKPHINLLTVKQ

Query:  QPCESLRDYITRFNDEALQVEGYSEVAALLAITAGLEDERLLNSIGKSQPRTYAEFVSRAQKYMSADELLKSKRSEREYKRSSSSDHDSKKDKRQRT---
        +  ESL++Y+ RFN+E LQVEG ++  AL+A  +G++DERL+ S GK  P T+ E +SRAQKYMSA EL+   R     + + S+  + + +KR R+   
Subjt:  QPCESLRDYITRFNDEALQVEGYSEVAALLAITAGLEDERLLNSIGKSQPRTYAEFVSRAQKYMSADELLKSKRSEREYKRSSSSDHDSKKDKRQRT---

Query:  -DERGRGR
          + G GR
Subjt:  -DERGRGR

A0A6J1E1E7 uncharacterized protein LOC1110255488.8e-3037.96Show/hide
Query:  LNTLKELGNPQGDLQK--SKDLGDQNLEELADQVDLPFTEEDMKAEVPQKFKVPTFKQYDGKKDPVQHLNAYRSWMDFHGVSDAI---------------
        LN  K +  P+   ++   K+ G  +LEEL  Q D PFTEE M+ +VP KFK+PT K +DG  +PV HL+AYR WMD +GVSDAI               
Subjt:  LNTLKELGNPQGDLQK--SKDLGDQNLEELADQVDLPFTEEDMKAEVPQKFKVPTFKQYDGKKDPVQHLNAYRSWMDFHGVSDAI---------------

Query:  ---------------------------REQRKPHINLLTVKQQPCESLRDYITRFNDEALQVEGYSEVAALLAITAGLEDERLLNSIGKSQPRTYAEFVS
                                   R + +P   LLT+KQ+  ESL DY+ RFN+E LQ+EG ++  +LLA  +G+ DE L  S  K  P T++E +S
Subjt:  ---------------------------REQRKPHINLLTVKQQPCESLRDYITRFNDEALQVEGYSEVAALLAITAGLEDERLLNSIGKSQPRTYAEFVS

Query:  RAQKYMSADELLKSKRSEREYKRSSSSDHDSKKDKRQRTDERGRG
        RAQ+YMSA E   SKR     +     +    K +  R ++R RG
Subjt:  RAQKYMSADELLKSKRSEREYKRSSSSDHDSKKDKRQRTDERGRG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTAAGGGGATGGAGAAGAAAGACCATGACATGAACGTAGAGCATTCGGATGGTGACCGCCACCAGTGGAGGTCACGGGAAGAAGGCCGAGGCCGACCTCAAACAGA
ATCTCCTCAACCTCGATCTCCACTGCCCTCATCCCGAGAGAAGCAATCTGATTTAAAATTTGCTGCTCTCGAAAACAAAGTGAGTGCGATGGATCATAATTTGTCCAGGA
TACTGCGTATCTTGGATAAACCTGGTCCTAGCACTAAAACCCCTGATGAGAGGTTGGTTAGGGATCCGAGGAAGGGGAAGGAGCCCATGGAGCACACTGCAGAGTCAGAG
ACGAGGTCGAAGGGAAAGAAGACTGACAGCATGACCATTTCTACCCCAAGCTACGGTCATAATAAGACAGACCTGAGGAATCTGATCGTTGAGAAGCGCAGAAGTGCCAA
AACTGCCGAGTCCAAGGCCAAAGCCGCCGAAGCTGAAGCCCGGGCTGCCGAGGCCGAGGCCAGAGCAGCTGAGGCCGAGGCTAGGTTGGCCGAGGCCGAGGCCAAGAAAG
ACAACCTCCCTTGGAAGACCGAGCTTCTAAACACACTAAAGGAGCTCGGAAATCCTCAGGGAGACCTGCAGAAGTCAAAGGACCTTGGAGATCAAAACTTGGAAGAACTA
GCCGACCAAGTCGATCTGCCCTTCACAGAAGAAGACATGAAAGCCGAGGTGCCCCAAAAGTTTAAGGTACCCACATTCAAACAGTACGATGGCAAGAAAGACCCCGTGCA
ACATCTAAACGCATACAGAAGCTGGATGGACTTCCACGGCGTCTCAGATGCAATTAGAGAGCAGCGCAAGCCTCACATCAACCTCTTGACAGTCAAACAGCAGCCATGTG
AGAGCTTGCGTGATTACATAACTCGTTTTAATGACGAAGCACTACAGGTTGAGGGGTACAGCGAGGTAGCAGCCCTGTTAGCCATAACAGCCGGACTGGAAGACGAAAGA
CTGCTCAATTCAATAGGTAAGAGTCAACCTCGAACCTACGCGGAGTTTGTCTCCCGAGCACAGAAGTATATGAGCGCAGATGAGTTACTGAAATCAAAGAGATCAGAACG
AGAGTACAAGAGGTCTTCTTCATCTGACCACGATAGCAAAAAGGACAAGAGGCAGCGGACAGACGAAAGAGGCCGAGGCCGAGCTGACCATGACAATAGCCGAGGCCAAC
TAGCACCACTTTTGGAGTGTCTACATCTATCCTATTTTGCAGGATGA
mRNA sequenceShow/hide mRNA sequence
ATGAGTAAGGGGATGGAGAAGAAAGACCATGACATGAACGTAGAGCATTCGGATGGTGACCGCCACCAGTGGAGGTCACGGGAAGAAGGCCGAGGCCGACCTCAAACAGA
ATCTCCTCAACCTCGATCTCCACTGCCCTCATCCCGAGAGAAGCAATCTGATTTAAAATTTGCTGCTCTCGAAAACAAAGTGAGTGCGATGGATCATAATTTGTCCAGGA
TACTGCGTATCTTGGATAAACCTGGTCCTAGCACTAAAACCCCTGATGAGAGGTTGGTTAGGGATCCGAGGAAGGGGAAGGAGCCCATGGAGCACACTGCAGAGTCAGAG
ACGAGGTCGAAGGGAAAGAAGACTGACAGCATGACCATTTCTACCCCAAGCTACGGTCATAATAAGACAGACCTGAGGAATCTGATCGTTGAGAAGCGCAGAAGTGCCAA
AACTGCCGAGTCCAAGGCCAAAGCCGCCGAAGCTGAAGCCCGGGCTGCCGAGGCCGAGGCCAGAGCAGCTGAGGCCGAGGCTAGGTTGGCCGAGGCCGAGGCCAAGAAAG
ACAACCTCCCTTGGAAGACCGAGCTTCTAAACACACTAAAGGAGCTCGGAAATCCTCAGGGAGACCTGCAGAAGTCAAAGGACCTTGGAGATCAAAACTTGGAAGAACTA
GCCGACCAAGTCGATCTGCCCTTCACAGAAGAAGACATGAAAGCCGAGGTGCCCCAAAAGTTTAAGGTACCCACATTCAAACAGTACGATGGCAAGAAAGACCCCGTGCA
ACATCTAAACGCATACAGAAGCTGGATGGACTTCCACGGCGTCTCAGATGCAATTAGAGAGCAGCGCAAGCCTCACATCAACCTCTTGACAGTCAAACAGCAGCCATGTG
AGAGCTTGCGTGATTACATAACTCGTTTTAATGACGAAGCACTACAGGTTGAGGGGTACAGCGAGGTAGCAGCCCTGTTAGCCATAACAGCCGGACTGGAAGACGAAAGA
CTGCTCAATTCAATAGGTAAGAGTCAACCTCGAACCTACGCGGAGTTTGTCTCCCGAGCACAGAAGTATATGAGCGCAGATGAGTTACTGAAATCAAAGAGATCAGAACG
AGAGTACAAGAGGTCTTCTTCATCTGACCACGATAGCAAAAAGGACAAGAGGCAGCGGACAGACGAAAGAGGCCGAGGCCGAGCTGACCATGACAATAGCCGAGGCCAAC
TAGCACCACTTTTGGAGTGTCTACATCTATCCTATTTTGCAGGATGA
Protein sequenceShow/hide protein sequence
MSKGMEKKDHDMNVEHSDGDRHQWRSREEGRGRPQTESPQPRSPLPSSREKQSDLKFAALENKVSAMDHNLSRILRILDKPGPSTKTPDERLVRDPRKGKEPMEHTAESE
TRSKGKKTDSMTISTPSYGHNKTDLRNLIVEKRRSAKTAESKAKAAEAEARAAEAEARAAEAEARLAEAEAKKDNLPWKTELLNTLKELGNPQGDLQKSKDLGDQNLEEL
ADQVDLPFTEEDMKAEVPQKFKVPTFKQYDGKKDPVQHLNAYRSWMDFHGVSDAIREQRKPHINLLTVKQQPCESLRDYITRFNDEALQVEGYSEVAALLAITAGLEDER
LLNSIGKSQPRTYAEFVSRAQKYMSADELLKSKRSEREYKRSSSSDHDSKKDKRQRTDERGRGRADHDNSRGQLAPLLECLHLSYFAG