| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA0025945.1 gag/pol protein [Cucumis melo var. makuwa] | 6.9e-151 | 46.57 | Show/hide |
Query: VHDEYDIDCLAHL-----NENKFDLLVIETCIVENDDTSWILDSGATHHVCSSFEGMSSWQQLDTGEMTLRVGTGELISAKVVGDIKMFFSREHYMLLDN
V + + +C +L E K+DLLV+ETC+VEND +WILDSGAT+HVCSS + SS++QL+ EMTL+VGTG++ISA+ VGD K+FF + +M L+N
Subjt: VHDEYDIDCLAHL-----NENKFDLLVIETCIVENDDTSWILDSGATHHVCSSFEGMSSWQQLDTGEMTLRVGTGELISAKVVGDIKMFFSREHYMLLDN
Query: VSKIMLMSTVLFEDITSVKEHVVNVLYARNSLVSWLAYGTTIEARRRTTRYSFPITAMLENRCCKYAIVQIIPIDMPERRINIMSPTSNVMRDESDKVRV
+ + + L ++ + EH+ ++ ++ N Y + +A LEN + ++ P
Subjt: VSKIMLMSTVLFEDITSVKEHVVNVLYARNSLVSWLAYGTTIEARRRTTRYSFPITAMLENRCCKYAIVQIIPIDMPERRINIMSPTSNVMRDESDKVRV
Query: FGQLGEKVSLELILRVVADVGLVAREGNKVSYVCCSSFSPLDVDKATHVGRGGGGAFGDGETGVSHLLSAIVCTDLPSNFAVNEMFKTAETQPKRQKVS-
+ + ++H EMF+TA TQ KRQ++S
Subjt: FGQLGEKVSLELILRVVADVGLVAREGNKVSYVCCSSFSPLDVDKATHVGRGGGGAFGDGETGVSHLLSAIVCTDLPSNFAVNEMFKTAETQPKRQKVS-
Query: -QSTYLWHLRLGNINLNMIGRLVKNGLLSQLEDGTLPSCESGLEG-------------------------------------------------------
+TYLWHLRLG+INL+ IGRLVKNGLL++L+D +LP CES LEG
Subjt: -QSTYLWHLRLGNINLNMIGRLVKNGLLSQLEDGTLPSCESGLEG-------------------------------------------------------
Query: -----------------------KTIKTLRSDRGGEYLGLKFQNYLIEHEISSQLLAPGTPQQNGVSERRNRTLLDMVRSMMSYAQLPSSFWGYAVEIAV
K IK LRSDRGGEY+ L+FQ+Y+IEH I SQL APGTPQQNGVSERRNRTLLDMVRSMMSYAQLPSSFWGYAVE AV
Subjt: -----------------------KTIKTLRSDRGGEYLGLKFQNYLIEHEISSQLLAPGTPQQNGVSERRNRTLLDMVRSMMSYAQLPSSFWGYAVEIAV
Query: YILNVVSSKSVSKTPFELWRGRKASLPHFRIWGCPAHVLVANPKKLDSRSKLCLFVGYPKETRGGYFFDPQENKVFVSTNATFLEEDHVREHKPHSKMVL
+ILN V SKSVS+TPFELWRGRK SL HFRIWGCPAHVLV NPKKL+ RS+LC FVGYPKETRGG FFDPQEN+VFVSTNATFLEEDH+R HKP SK+VL
Subjt: YILNVVSSKSVSKTPFELWRGRKASLPHFRIWGCPAHVLVANPKKLDSRSKLCLFVGYPKETRGGYFFDPQENKVFVSTNATFLEEDHVREHKPHSKMVL
Query: SGLSGEATNESTRVGPSTRVVDEPSTQTGPSTRVVDEPSTSGQAQPSQQFRMPRRSGRVVTQPERYLSLAETPAVISDDGIEDPLTFRQAMNDVDHDEWV
S EAT+E STRVVDE GPS+R VDE +TSGQ+ PSQ RMPRRSGRVV+QP RYL L ET VI DDG+EDPL+++QAMNDVD D+WV
Subjt: SGLSGEATNESTRVGPSTRVVDEPSTQTGPSTRVVDEPSTSGQAQPSQQFRMPRRSGRVVTQPERYLSLAETPAVISDDGIEDPLTFRQAMNDVDHDEWV
Query: KAMDLEMESMYFNQV
KAMDLEMESMYFN V
Subjt: KAMDLEMESMYFNQV
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| KAA0035907.1 gag/pol protein [Cucumis melo var. makuwa] | 6.4e-149 | 46.15 | Show/hide |
Query: VHDEYDIDCLAHL-----NENKFDLLVIETCIVENDDTSWILDSGATHHVCSSFEGMSSWQQLDTGEMTLRVGTGELISAKVVGDIKMFFSREHYMLLDN
V + + +C +L E+K+DLLV+ETC+VEND +WILDSGAT+HVCSS + SS++QL+ EMTL+VGTG++ISA+ VGD K+FF + +M L+N
Subjt: VHDEYDIDCLAHL-----NENKFDLLVIETCIVENDDTSWILDSGATHHVCSSFEGMSSWQQLDTGEMTLRVGTGELISAKVVGDIKMFFSREHYMLLDN
Query: VSKIMLMSTVLFEDITSVKEHVVNVLYARNSLVSWLAYGTTIEARRRTTRYSFPITAMLENRCCKYAIVQIIPIDMPERRINIMSPTSNVMRDESDKVRV
+ + + L ++ + EH+ ++ ++ N Y + +A LEN + ++ P
Subjt: VSKIMLMSTVLFEDITSVKEHVVNVLYARNSLVSWLAYGTTIEARRRTTRYSFPITAMLENRCCKYAIVQIIPIDMPERRINIMSPTSNVMRDESDKVRV
Query: FGQLGEKVSLELILRVVADVGLVAREGNKVSYVCCSSFSPLDVDKATHVGRGGGGAFGDGETGVSHLLSAIVCTDLPSNFAVNEMFKTAETQPKRQKVS-
+ + ++H EMF+TA TQ KRQ++S
Subjt: FGQLGEKVSLELILRVVADVGLVAREGNKVSYVCCSSFSPLDVDKATHVGRGGGGAFGDGETGVSHLLSAIVCTDLPSNFAVNEMFKTAETQPKRQKVS-
Query: -QSTYLWHLRLGNINLNMIGRLVKNGLLSQLEDGTLPSCESGLEG-------------------------------------------------------
+TYLWHLRLG+INL+ IGRLVK+GLL++L+D +LP CES LEG
Subjt: -QSTYLWHLRLGNINLNMIGRLVKNGLLSQLEDGTLPSCESGLEG-------------------------------------------------------
Query: -----------------------KTIKTLRSDRGGEYLGLKFQNYLIEHEISSQLLAPGTPQQNGVSERRNRTLLDMVRSMMSYAQLPSSFWGYAVEIAV
K IK RSDRGGEY+ L FQ+Y+IEH I SQL APGTPQQNGVSERRNRTLLDMVRSMMSYAQLPSSFWGYAVE AV
Subjt: -----------------------KTIKTLRSDRGGEYLGLKFQNYLIEHEISSQLLAPGTPQQNGVSERRNRTLLDMVRSMMSYAQLPSSFWGYAVEIAV
Query: YILNVVSSKSVSKTPFELWRGRKASLPHFRIWGCPAHVLVANPKKLDSRSKLCLFVGYPKETRGGYFFDPQENKVFVSTNATFLEEDHVREHKPHSKMVL
+ILN V SKSVS+TPFELWRGRK SL HFRIWGCPAHVLV NPKKL+ RS+LC FVGYPKETRGG FFDP+EN+VFVSTNATFLEEDH+R HKP SK+VL
Subjt: YILNVVSSKSVSKTPFELWRGRKASLPHFRIWGCPAHVLVANPKKLDSRSKLCLFVGYPKETRGGYFFDPQENKVFVSTNATFLEEDHVREHKPHSKMVL
Query: SGLSGEATNESTRVGPSTRVVDEPSTQTGPSTRVVDEPSTSGQAQPSQQFRMPRRSGRVVTQPERYLSLAETPAVISDDGIEDPLTFRQAMNDVDHDEWV
S EAT+E STRVVDE GPS+R VDE +TSGQ+ PSQ RMPRRSGRVV+QP RYL L ET VI DDG+EDPL+++QAMNDVD D+WV
Subjt: SGLSGEATNESTRVGPSTRVVDEPSTQTGPSTRVVDEPSTSGQAQPSQQFRMPRRSGRVVTQPERYLSLAETPAVISDDGIEDPLTFRQAMNDVDHDEWV
Query: KAMDLEMESMYFNQV
KAMDLEMESMYFN V
Subjt: KAMDLEMESMYFNQV
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| KAA0048404.1 gag/pol protein [Cucumis melo var. makuwa] | 1.8e-143 | 47.06 | Show/hide |
Query: ENKFDLLVIETCIVENDDTSWILDSGATHHVCSSFEGMSSWQQLDTGEMTLRVGTGELISAKVVGDIKMFFSREHYMLLDNVSKIMLMSTVLFEDITSVK
+ K+DLLV+ETC+VENDD++WI+DSGAT+HVCSSF+G+SSW+QL+TGEMT+RVGTG ++SA VG +++ + ++LL+NV
Subjt: ENKFDLLVIETCIVENDDTSWILDSGATHHVCSSFEGMSSWQQLDTGEMTLRVGTGELISAKVVGDIKMFFSREHYMLLDNVSKIMLMSTVLFEDITSVK
Query: EHVVNVLYARNSLVSWLAYGTTIEARRRTTRYSFPITAMLENRCCKYAIVQIIPIDMPERRINIMSPTSNVMRDESDKVRVFGQLGEKVSLELILRVVAD
+VV L + +L+S + +LE S T NV +KV ++ E S +L
Subjt: EHVVNVLYARNSLVSWLAYGTTIEARRRTTRYSFPITAMLENRCCKYAIVQIIPIDMPERRINIMSPTSNVMRDESDKVRVFGQLGEKVSLELILRVVAD
Query: VGLVAREGNKVSYVCCSSFSPLDVDKATHVGRGGGGAFGDGETGVSHLLSAIVCTDLPSNFAVN-EMFKTAETQPKRQKVS--QSTYLWHLRLGNINLNM
E N V L S +N EMFKTA TQ KR K+S ++ +LWHLRLG+INLN
Subjt: VGLVAREGNKVSYVCCSSFSPLDVDKATHVGRGGGGAFGDGETGVSHLLSAIVCTDLPSNFAVN-EMFKTAETQPKRQKVS--QSTYLWHLRLGNINLNM
Query: IGRLVKNGLLSQLEDGTLPSCESGLEG-------------------------------------------------------------------------
I RLVKNGLLS+LE+ +LP CES LEG
Subjt: IGRLVKNGLLSQLEDGTLPSCESGLEG-------------------------------------------------------------------------
Query: -----KTIKTLRSDRGGEYLGLKFQNYLIEHEISSQLLAPGTPQQNGVSERRNRTLLDMVRSMMSYAQLPSSFWGYAVEIAVYILNVVSSKSVSKTPFEL
KTIKT RSDRGGEY+ LKFQNYL+E I SQL APGTPQQNGVSERRNRTLLDMVRSMMSYA LP+SFWGYAV+ AVYILN V SKSVS+TP +L
Subjt: -----KTIKTLRSDRGGEYLGLKFQNYLIEHEISSQLLAPGTPQQNGVSERRNRTLLDMVRSMMSYAQLPSSFWGYAVEIAVYILNVVSSKSVSKTPFEL
Query: WRGRKASLPHFRIWGCPAHVLVANPKKLDSRSKLCLFVGYPKETRGGYFFDPQENKVFVSTNATFLEEDHVREHKPHSKMVLSGLSGEATNESTRVGPST
W GRK SL HFRIWGCPAHVL NPKKL+ RSKLCLFVGYPK TRGGYF+DP++NKVFVSTNATFLEEDH+REHKP SK+VL+ LS E T PST
Subjt: WRGRKASLPHFRIWGCPAHVLVANPKKLDSRSKLCLFVGYPKETRGGYFFDPQENKVFVSTNATFLEEDHVREHKPHSKMVLSGLSGEATNESTRVGPST
Query: RVVDEPSTQTGPSTRVVDEPSTSGQAQPSQQFRMPRRSGRVVTQPERYLSLAETPAVISDDGIEDPLTFRQAMNDVDHDEWVKAMDLEMESMYFNQV
RVV+EPS TRVV S++ QP Q R PRRSGRV P RY+SL ET VISD IEDPLTF++AM DVD DEW+KAM+LE+ESMYFN V
Subjt: RVVDEPSTQTGPSTRVVDEPSTSGQAQPSQQFRMPRRSGRVVTQPERYLSLAETPAVISDDGIEDPLTFRQAMNDVDHDEWVKAMDLEMESMYFNQV
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| KAA0054490.1 gag/pol protein [Cucumis melo var. makuwa] | 1.8e-143 | 47.06 | Show/hide |
Query: ENKFDLLVIETCIVENDDTSWILDSGATHHVCSSFEGMSSWQQLDTGEMTLRVGTGELISAKVVGDIKMFFSREHYMLLDNVSKIMLMSTVLFEDITSVK
+ K+DLLV+ETC+VENDD++WI+DSGAT+HVCSSF+G+SSW+QL+TGEMT+RVGTG ++SA VG +++ + ++LL+NV
Subjt: ENKFDLLVIETCIVENDDTSWILDSGATHHVCSSFEGMSSWQQLDTGEMTLRVGTGELISAKVVGDIKMFFSREHYMLLDNVSKIMLMSTVLFEDITSVK
Query: EHVVNVLYARNSLVSWLAYGTTIEARRRTTRYSFPITAMLENRCCKYAIVQIIPIDMPERRINIMSPTSNVMRDESDKVRVFGQLGEKVSLELILRVVAD
+VV L + +L+S + +LE S T NV +KV ++ E S +L
Subjt: EHVVNVLYARNSLVSWLAYGTTIEARRRTTRYSFPITAMLENRCCKYAIVQIIPIDMPERRINIMSPTSNVMRDESDKVRVFGQLGEKVSLELILRVVAD
Query: VGLVAREGNKVSYVCCSSFSPLDVDKATHVGRGGGGAFGDGETGVSHLLSAIVCTDLPSNFAVN-EMFKTAETQPKRQKVS--QSTYLWHLRLGNINLNM
E N V L S +N EMFKTA TQ KR K+S ++ +LWHLRLG+INLN
Subjt: VGLVAREGNKVSYVCCSSFSPLDVDKATHVGRGGGGAFGDGETGVSHLLSAIVCTDLPSNFAVN-EMFKTAETQPKRQKVS--QSTYLWHLRLGNINLNM
Query: IGRLVKNGLLSQLEDGTLPSCESGLEG-------------------------------------------------------------------------
I RLVKNGLLS+LE+ +LP CES LEG
Subjt: IGRLVKNGLLSQLEDGTLPSCESGLEG-------------------------------------------------------------------------
Query: -----KTIKTLRSDRGGEYLGLKFQNYLIEHEISSQLLAPGTPQQNGVSERRNRTLLDMVRSMMSYAQLPSSFWGYAVEIAVYILNVVSSKSVSKTPFEL
KTIKT RSDRGGEY+ LKFQNYL+E I SQL APGTPQQNGVSERRNRTLLDMVRSMMSYA LP+SFWGYAV+ AVYILN V SKSVS+TP +L
Subjt: -----KTIKTLRSDRGGEYLGLKFQNYLIEHEISSQLLAPGTPQQNGVSERRNRTLLDMVRSMMSYAQLPSSFWGYAVEIAVYILNVVSSKSVSKTPFEL
Query: WRGRKASLPHFRIWGCPAHVLVANPKKLDSRSKLCLFVGYPKETRGGYFFDPQENKVFVSTNATFLEEDHVREHKPHSKMVLSGLSGEATNESTRVGPST
W GRK SL HFRIWGCPAHVL NPKKL+ RSKLCLFVGYPK TRGGYF+DP++NKVFVSTNATFLEEDH+REHKP SK+VL+ LS E T PST
Subjt: WRGRKASLPHFRIWGCPAHVLVANPKKLDSRSKLCLFVGYPKETRGGYFFDPQENKVFVSTNATFLEEDHVREHKPHSKMVLSGLSGEATNESTRVGPST
Query: RVVDEPSTQTGPSTRVVDEPSTSGQAQPSQQFRMPRRSGRVVTQPERYLSLAETPAVISDDGIEDPLTFRQAMNDVDHDEWVKAMDLEMESMYFNQV
RVV+EPS TRVV S++ QP Q R PRRSGRV P RY+SL ET VISD IEDPLTF++AM DVD DEW+KAM+LE+ESMYFN V
Subjt: RVVDEPSTQTGPSTRVVDEPSTSGQAQPSQQFRMPRRSGRVVTQPERYLSLAETPAVISDDGIEDPLTFRQAMNDVDHDEWVKAMDLEMESMYFNQV
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| TYK14550.1 gag/pol protein [Cucumis melo var. makuwa] | 1.8e-143 | 47.06 | Show/hide |
Query: ENKFDLLVIETCIVENDDTSWILDSGATHHVCSSFEGMSSWQQLDTGEMTLRVGTGELISAKVVGDIKMFFSREHYMLLDNVSKIMLMSTVLFEDITSVK
+ K+DLLV+ETC+VENDD++WI+DSGAT+HVCSSF+G+SSW+QL+TGEMT+RVGTG ++SA VG +++ + ++LL+NV
Subjt: ENKFDLLVIETCIVENDDTSWILDSGATHHVCSSFEGMSSWQQLDTGEMTLRVGTGELISAKVVGDIKMFFSREHYMLLDNVSKIMLMSTVLFEDITSVK
Query: EHVVNVLYARNSLVSWLAYGTTIEARRRTTRYSFPITAMLENRCCKYAIVQIIPIDMPERRINIMSPTSNVMRDESDKVRVFGQLGEKVSLELILRVVAD
+VV L + +L+S + +LE S T NV +KV ++ E S +L
Subjt: EHVVNVLYARNSLVSWLAYGTTIEARRRTTRYSFPITAMLENRCCKYAIVQIIPIDMPERRINIMSPTSNVMRDESDKVRVFGQLGEKVSLELILRVVAD
Query: VGLVAREGNKVSYVCCSSFSPLDVDKATHVGRGGGGAFGDGETGVSHLLSAIVCTDLPSNFAVN-EMFKTAETQPKRQKVS--QSTYLWHLRLGNINLNM
E N V L S +N EMFKTA TQ KR K+S ++ +LWHLRLG+INLN
Subjt: VGLVAREGNKVSYVCCSSFSPLDVDKATHVGRGGGGAFGDGETGVSHLLSAIVCTDLPSNFAVN-EMFKTAETQPKRQKVS--QSTYLWHLRLGNINLNM
Query: IGRLVKNGLLSQLEDGTLPSCESGLEG-------------------------------------------------------------------------
I RLVKNGLLS+LE+ +LP CES LEG
Subjt: IGRLVKNGLLSQLEDGTLPSCESGLEG-------------------------------------------------------------------------
Query: -----KTIKTLRSDRGGEYLGLKFQNYLIEHEISSQLLAPGTPQQNGVSERRNRTLLDMVRSMMSYAQLPSSFWGYAVEIAVYILNVVSSKSVSKTPFEL
KTIKT RSDRGGEY+ LKFQNYL+E I SQL APGTPQQNGVSERRNRTLLDMVRSMMSYA LP+SFWGYAV+ AVYILN V SKSVS+TP +L
Subjt: -----KTIKTLRSDRGGEYLGLKFQNYLIEHEISSQLLAPGTPQQNGVSERRNRTLLDMVRSMMSYAQLPSSFWGYAVEIAVYILNVVSSKSVSKTPFEL
Query: WRGRKASLPHFRIWGCPAHVLVANPKKLDSRSKLCLFVGYPKETRGGYFFDPQENKVFVSTNATFLEEDHVREHKPHSKMVLSGLSGEATNESTRVGPST
W GRK SL HFRIWGCPAHVL NPKKL+ RSKLCLFVGYPK TRGGYF+DP++NKVFVSTNATFLEEDH+REHKP SK+VL+ LS E T PST
Subjt: WRGRKASLPHFRIWGCPAHVLVANPKKLDSRSKLCLFVGYPKETRGGYFFDPQENKVFVSTNATFLEEDHVREHKPHSKMVLSGLSGEATNESTRVGPST
Query: RVVDEPSTQTGPSTRVVDEPSTSGQAQPSQQFRMPRRSGRVVTQPERYLSLAETPAVISDDGIEDPLTFRQAMNDVDHDEWVKAMDLEMESMYFNQV
RVV+EPS TRVV S++ QP Q R PRRSGRV P RY+SL ET VISD IEDPLTF++AM DVD DEW+KAM+LE+ESMYFN V
Subjt: RVVDEPSTQTGPSTRVVDEPSTSGQAQPSQQFRMPRRSGRVVTQPERYLSLAETPAVISDDGIEDPLTFRQAMNDVDHDEWVKAMDLEMESMYFNQV
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7SMH8 Gag/pol protein | 8.8e-144 | 47.06 | Show/hide |
Query: ENKFDLLVIETCIVENDDTSWILDSGATHHVCSSFEGMSSWQQLDTGEMTLRVGTGELISAKVVGDIKMFFSREHYMLLDNVSKIMLMSTVLFEDITSVK
+ K+DLLV+ETC+VENDD++WI+DSGAT+HVCSSF+G+SSW+QL+TGEMT+RVGTG ++SA VG +++ + ++LL+NV
Subjt: ENKFDLLVIETCIVENDDTSWILDSGATHHVCSSFEGMSSWQQLDTGEMTLRVGTGELISAKVVGDIKMFFSREHYMLLDNVSKIMLMSTVLFEDITSVK
Query: EHVVNVLYARNSLVSWLAYGTTIEARRRTTRYSFPITAMLENRCCKYAIVQIIPIDMPERRINIMSPTSNVMRDESDKVRVFGQLGEKVSLELILRVVAD
+VV L + +L+S + +LE S T NV +KV ++ E S +L
Subjt: EHVVNVLYARNSLVSWLAYGTTIEARRRTTRYSFPITAMLENRCCKYAIVQIIPIDMPERRINIMSPTSNVMRDESDKVRVFGQLGEKVSLELILRVVAD
Query: VGLVAREGNKVSYVCCSSFSPLDVDKATHVGRGGGGAFGDGETGVSHLLSAIVCTDLPSNFAVN-EMFKTAETQPKRQKVS--QSTYLWHLRLGNINLNM
E N V L S +N EMFKTA TQ KR K+S ++ +LWHLRLG+INLN
Subjt: VGLVAREGNKVSYVCCSSFSPLDVDKATHVGRGGGGAFGDGETGVSHLLSAIVCTDLPSNFAVN-EMFKTAETQPKRQKVS--QSTYLWHLRLGNINLNM
Query: IGRLVKNGLLSQLEDGTLPSCESGLEG-------------------------------------------------------------------------
I RLVKNGLLS+LE+ +LP CES LEG
Subjt: IGRLVKNGLLSQLEDGTLPSCESGLEG-------------------------------------------------------------------------
Query: -----KTIKTLRSDRGGEYLGLKFQNYLIEHEISSQLLAPGTPQQNGVSERRNRTLLDMVRSMMSYAQLPSSFWGYAVEIAVYILNVVSSKSVSKTPFEL
KTIKT RSDRGGEY+ LKFQNYL+E I SQL APGTPQQNGVSERRNRTLLDMVRSMMSYA LP+SFWGYAV+ AVYILN V SKSVS+TP +L
Subjt: -----KTIKTLRSDRGGEYLGLKFQNYLIEHEISSQLLAPGTPQQNGVSERRNRTLLDMVRSMMSYAQLPSSFWGYAVEIAVYILNVVSSKSVSKTPFEL
Query: WRGRKASLPHFRIWGCPAHVLVANPKKLDSRSKLCLFVGYPKETRGGYFFDPQENKVFVSTNATFLEEDHVREHKPHSKMVLSGLSGEATNESTRVGPST
W GRK SL HFRIWGCPAHVL NPKKL+ RSKLCLFVGYPK TRGGYF+DP++NKVFVSTNATFLEEDH+REHKP SK+VL+ LS E T PST
Subjt: WRGRKASLPHFRIWGCPAHVLVANPKKLDSRSKLCLFVGYPKETRGGYFFDPQENKVFVSTNATFLEEDHVREHKPHSKMVLSGLSGEATNESTRVGPST
Query: RVVDEPSTQTGPSTRVVDEPSTSGQAQPSQQFRMPRRSGRVVTQPERYLSLAETPAVISDDGIEDPLTFRQAMNDVDHDEWVKAMDLEMESMYFNQV
RVV+EPS TRVV S++ QP Q R PRRSGRV P RY+SL ET VISD IEDPLTF++AM DVD DEW+KAM+LE+ESMYFN V
Subjt: RVVDEPSTQTGPSTRVVDEPSTSGQAQPSQQFRMPRRSGRVVTQPERYLSLAETPAVISDDGIEDPLTFRQAMNDVDHDEWVKAMDLEMESMYFNQV
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| A0A5A7T2V9 Gag/pol protein | 3.1e-149 | 46.15 | Show/hide |
Query: VHDEYDIDCLAHL-----NENKFDLLVIETCIVENDDTSWILDSGATHHVCSSFEGMSSWQQLDTGEMTLRVGTGELISAKVVGDIKMFFSREHYMLLDN
V + + +C +L E+K+DLLV+ETC+VEND +WILDSGAT+HVCSS + SS++QL+ EMTL+VGTG++ISA+ VGD K+FF + +M L+N
Subjt: VHDEYDIDCLAHL-----NENKFDLLVIETCIVENDDTSWILDSGATHHVCSSFEGMSSWQQLDTGEMTLRVGTGELISAKVVGDIKMFFSREHYMLLDN
Query: VSKIMLMSTVLFEDITSVKEHVVNVLYARNSLVSWLAYGTTIEARRRTTRYSFPITAMLENRCCKYAIVQIIPIDMPERRINIMSPTSNVMRDESDKVRV
+ + + L ++ + EH+ ++ ++ N Y + +A LEN + ++ P
Subjt: VSKIMLMSTVLFEDITSVKEHVVNVLYARNSLVSWLAYGTTIEARRRTTRYSFPITAMLENRCCKYAIVQIIPIDMPERRINIMSPTSNVMRDESDKVRV
Query: FGQLGEKVSLELILRVVADVGLVAREGNKVSYVCCSSFSPLDVDKATHVGRGGGGAFGDGETGVSHLLSAIVCTDLPSNFAVNEMFKTAETQPKRQKVS-
+ + ++H EMF+TA TQ KRQ++S
Subjt: FGQLGEKVSLELILRVVADVGLVAREGNKVSYVCCSSFSPLDVDKATHVGRGGGGAFGDGETGVSHLLSAIVCTDLPSNFAVNEMFKTAETQPKRQKVS-
Query: -QSTYLWHLRLGNINLNMIGRLVKNGLLSQLEDGTLPSCESGLEG-------------------------------------------------------
+TYLWHLRLG+INL+ IGRLVK+GLL++L+D +LP CES LEG
Subjt: -QSTYLWHLRLGNINLNMIGRLVKNGLLSQLEDGTLPSCESGLEG-------------------------------------------------------
Query: -----------------------KTIKTLRSDRGGEYLGLKFQNYLIEHEISSQLLAPGTPQQNGVSERRNRTLLDMVRSMMSYAQLPSSFWGYAVEIAV
K IK RSDRGGEY+ L FQ+Y+IEH I SQL APGTPQQNGVSERRNRTLLDMVRSMMSYAQLPSSFWGYAVE AV
Subjt: -----------------------KTIKTLRSDRGGEYLGLKFQNYLIEHEISSQLLAPGTPQQNGVSERRNRTLLDMVRSMMSYAQLPSSFWGYAVEIAV
Query: YILNVVSSKSVSKTPFELWRGRKASLPHFRIWGCPAHVLVANPKKLDSRSKLCLFVGYPKETRGGYFFDPQENKVFVSTNATFLEEDHVREHKPHSKMVL
+ILN V SKSVS+TPFELWRGRK SL HFRIWGCPAHVLV NPKKL+ RS+LC FVGYPKETRGG FFDP+EN+VFVSTNATFLEEDH+R HKP SK+VL
Subjt: YILNVVSSKSVSKTPFELWRGRKASLPHFRIWGCPAHVLVANPKKLDSRSKLCLFVGYPKETRGGYFFDPQENKVFVSTNATFLEEDHVREHKPHSKMVL
Query: SGLSGEATNESTRVGPSTRVVDEPSTQTGPSTRVVDEPSTSGQAQPSQQFRMPRRSGRVVTQPERYLSLAETPAVISDDGIEDPLTFRQAMNDVDHDEWV
S EAT+E STRVVDE GPS+R VDE +TSGQ+ PSQ RMPRRSGRVV+QP RYL L ET VI DDG+EDPL+++QAMNDVD D+WV
Subjt: SGLSGEATNESTRVGPSTRVVDEPSTQTGPSTRVVDEPSTSGQAQPSQQFRMPRRSGRVVTQPERYLSLAETPAVISDDGIEDPLTFRQAMNDVDHDEWV
Query: KAMDLEMESMYFNQV
KAMDLEMESMYFN V
Subjt: KAMDLEMESMYFNQV
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| A0A5A7TZD0 Gag/pol protein | 3.3e-151 | 46.57 | Show/hide |
Query: VHDEYDIDCLAHL-----NENKFDLLVIETCIVENDDTSWILDSGATHHVCSSFEGMSSWQQLDTGEMTLRVGTGELISAKVVGDIKMFFSREHYMLLDN
V + + +C +L E K+DLLV+ETC+VEND +WILDSGAT+HVCSS + SS++QL+ EMTL+VGTG++ISA+ VGD K+FF + +M L+N
Subjt: VHDEYDIDCLAHL-----NENKFDLLVIETCIVENDDTSWILDSGATHHVCSSFEGMSSWQQLDTGEMTLRVGTGELISAKVVGDIKMFFSREHYMLLDN
Query: VSKIMLMSTVLFEDITSVKEHVVNVLYARNSLVSWLAYGTTIEARRRTTRYSFPITAMLENRCCKYAIVQIIPIDMPERRINIMSPTSNVMRDESDKVRV
+ + + L ++ + EH+ ++ ++ N Y + +A LEN + ++ P
Subjt: VSKIMLMSTVLFEDITSVKEHVVNVLYARNSLVSWLAYGTTIEARRRTTRYSFPITAMLENRCCKYAIVQIIPIDMPERRINIMSPTSNVMRDESDKVRV
Query: FGQLGEKVSLELILRVVADVGLVAREGNKVSYVCCSSFSPLDVDKATHVGRGGGGAFGDGETGVSHLLSAIVCTDLPSNFAVNEMFKTAETQPKRQKVS-
+ + ++H EMF+TA TQ KRQ++S
Subjt: FGQLGEKVSLELILRVVADVGLVAREGNKVSYVCCSSFSPLDVDKATHVGRGGGGAFGDGETGVSHLLSAIVCTDLPSNFAVNEMFKTAETQPKRQKVS-
Query: -QSTYLWHLRLGNINLNMIGRLVKNGLLSQLEDGTLPSCESGLEG-------------------------------------------------------
+TYLWHLRLG+INL+ IGRLVKNGLL++L+D +LP CES LEG
Subjt: -QSTYLWHLRLGNINLNMIGRLVKNGLLSQLEDGTLPSCESGLEG-------------------------------------------------------
Query: -----------------------KTIKTLRSDRGGEYLGLKFQNYLIEHEISSQLLAPGTPQQNGVSERRNRTLLDMVRSMMSYAQLPSSFWGYAVEIAV
K IK LRSDRGGEY+ L+FQ+Y+IEH I SQL APGTPQQNGVSERRNRTLLDMVRSMMSYAQLPSSFWGYAVE AV
Subjt: -----------------------KTIKTLRSDRGGEYLGLKFQNYLIEHEISSQLLAPGTPQQNGVSERRNRTLLDMVRSMMSYAQLPSSFWGYAVEIAV
Query: YILNVVSSKSVSKTPFELWRGRKASLPHFRIWGCPAHVLVANPKKLDSRSKLCLFVGYPKETRGGYFFDPQENKVFVSTNATFLEEDHVREHKPHSKMVL
+ILN V SKSVS+TPFELWRGRK SL HFRIWGCPAHVLV NPKKL+ RS+LC FVGYPKETRGG FFDPQEN+VFVSTNATFLEEDH+R HKP SK+VL
Subjt: YILNVVSSKSVSKTPFELWRGRKASLPHFRIWGCPAHVLVANPKKLDSRSKLCLFVGYPKETRGGYFFDPQENKVFVSTNATFLEEDHVREHKPHSKMVL
Query: SGLSGEATNESTRVGPSTRVVDEPSTQTGPSTRVVDEPSTSGQAQPSQQFRMPRRSGRVVTQPERYLSLAETPAVISDDGIEDPLTFRQAMNDVDHDEWV
S EAT+E STRVVDE GPS+R VDE +TSGQ+ PSQ RMPRRSGRVV+QP RYL L ET VI DDG+EDPL+++QAMNDVD D+WV
Subjt: SGLSGEATNESTRVGPSTRVVDEPSTQTGPSTRVVDEPSTSGQAQPSQQFRMPRRSGRVVTQPERYLSLAETPAVISDDGIEDPLTFRQAMNDVDHDEWV
Query: KAMDLEMESMYFNQV
KAMDLEMESMYFN V
Subjt: KAMDLEMESMYFNQV
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| A0A5A7V4M1 Gag/pol protein | 8.8e-144 | 47.06 | Show/hide |
Query: ENKFDLLVIETCIVENDDTSWILDSGATHHVCSSFEGMSSWQQLDTGEMTLRVGTGELISAKVVGDIKMFFSREHYMLLDNVSKIMLMSTVLFEDITSVK
+ K+DLLV+ETC+VENDD++WI+DSGAT+HVCSSF+G+SSW+QL+TGEMT+RVGTG ++SA VG +++ + ++LL+NV
Subjt: ENKFDLLVIETCIVENDDTSWILDSGATHHVCSSFEGMSSWQQLDTGEMTLRVGTGELISAKVVGDIKMFFSREHYMLLDNVSKIMLMSTVLFEDITSVK
Query: EHVVNVLYARNSLVSWLAYGTTIEARRRTTRYSFPITAMLENRCCKYAIVQIIPIDMPERRINIMSPTSNVMRDESDKVRVFGQLGEKVSLELILRVVAD
+VV L + +L+S + +LE S T NV +KV ++ E S +L
Subjt: EHVVNVLYARNSLVSWLAYGTTIEARRRTTRYSFPITAMLENRCCKYAIVQIIPIDMPERRINIMSPTSNVMRDESDKVRVFGQLGEKVSLELILRVVAD
Query: VGLVAREGNKVSYVCCSSFSPLDVDKATHVGRGGGGAFGDGETGVSHLLSAIVCTDLPSNFAVN-EMFKTAETQPKRQKVS--QSTYLWHLRLGNINLNM
E N V L S +N EMFKTA TQ KR K+S ++ +LWHLRLG+INLN
Subjt: VGLVAREGNKVSYVCCSSFSPLDVDKATHVGRGGGGAFGDGETGVSHLLSAIVCTDLPSNFAVN-EMFKTAETQPKRQKVS--QSTYLWHLRLGNINLNM
Query: IGRLVKNGLLSQLEDGTLPSCESGLEG-------------------------------------------------------------------------
I RLVKNGLLS+LE+ +LP CES LEG
Subjt: IGRLVKNGLLSQLEDGTLPSCESGLEG-------------------------------------------------------------------------
Query: -----KTIKTLRSDRGGEYLGLKFQNYLIEHEISSQLLAPGTPQQNGVSERRNRTLLDMVRSMMSYAQLPSSFWGYAVEIAVYILNVVSSKSVSKTPFEL
KTIKT RSDRGGEY+ LKFQNYL+E I SQL APGTPQQNGVSERRNRTLLDMVRSMMSYA LP+SFWGYAV+ AVYILN V SKSVS+TP +L
Subjt: -----KTIKTLRSDRGGEYLGLKFQNYLIEHEISSQLLAPGTPQQNGVSERRNRTLLDMVRSMMSYAQLPSSFWGYAVEIAVYILNVVSSKSVSKTPFEL
Query: WRGRKASLPHFRIWGCPAHVLVANPKKLDSRSKLCLFVGYPKETRGGYFFDPQENKVFVSTNATFLEEDHVREHKPHSKMVLSGLSGEATNESTRVGPST
W GRK SL HFRIWGCPAHVL NPKKL+ RSKLCLFVGYPK TRGGYF+DP++NKVFVSTNATFLEEDH+REHKP SK+VL+ LS E T PST
Subjt: WRGRKASLPHFRIWGCPAHVLVANPKKLDSRSKLCLFVGYPKETRGGYFFDPQENKVFVSTNATFLEEDHVREHKPHSKMVLSGLSGEATNESTRVGPST
Query: RVVDEPSTQTGPSTRVVDEPSTSGQAQPSQQFRMPRRSGRVVTQPERYLSLAETPAVISDDGIEDPLTFRQAMNDVDHDEWVKAMDLEMESMYFNQV
RVV+EPS TRVV S++ QP Q R PRRSGRV P RY+SL ET VISD IEDPLTF++AM DVD DEW+KAM+LE+ESMYFN V
Subjt: RVVDEPSTQTGPSTRVVDEPSTSGQAQPSQQFRMPRRSGRVVTQPERYLSLAETPAVISDDGIEDPLTFRQAMNDVDHDEWVKAMDLEMESMYFNQV
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| A0A5D3CPJ6 Gag/pol protein | 8.8e-144 | 47.06 | Show/hide |
Query: ENKFDLLVIETCIVENDDTSWILDSGATHHVCSSFEGMSSWQQLDTGEMTLRVGTGELISAKVVGDIKMFFSREHYMLLDNVSKIMLMSTVLFEDITSVK
+ K+DLLV+ETC+VENDD++WI+DSGAT+HVCSSF+G+SSW+QL+TGEMT+RVGTG ++SA VG +++ + ++LL+NV
Subjt: ENKFDLLVIETCIVENDDTSWILDSGATHHVCSSFEGMSSWQQLDTGEMTLRVGTGELISAKVVGDIKMFFSREHYMLLDNVSKIMLMSTVLFEDITSVK
Query: EHVVNVLYARNSLVSWLAYGTTIEARRRTTRYSFPITAMLENRCCKYAIVQIIPIDMPERRINIMSPTSNVMRDESDKVRVFGQLGEKVSLELILRVVAD
+VV L + +L+S + +LE S T NV +KV ++ E S +L
Subjt: EHVVNVLYARNSLVSWLAYGTTIEARRRTTRYSFPITAMLENRCCKYAIVQIIPIDMPERRINIMSPTSNVMRDESDKVRVFGQLGEKVSLELILRVVAD
Query: VGLVAREGNKVSYVCCSSFSPLDVDKATHVGRGGGGAFGDGETGVSHLLSAIVCTDLPSNFAVN-EMFKTAETQPKRQKVS--QSTYLWHLRLGNINLNM
E N V L S +N EMFKTA TQ KR K+S ++ +LWHLRLG+INLN
Subjt: VGLVAREGNKVSYVCCSSFSPLDVDKATHVGRGGGGAFGDGETGVSHLLSAIVCTDLPSNFAVN-EMFKTAETQPKRQKVS--QSTYLWHLRLGNINLNM
Query: IGRLVKNGLLSQLEDGTLPSCESGLEG-------------------------------------------------------------------------
I RLVKNGLLS+LE+ +LP CES LEG
Subjt: IGRLVKNGLLSQLEDGTLPSCESGLEG-------------------------------------------------------------------------
Query: -----KTIKTLRSDRGGEYLGLKFQNYLIEHEISSQLLAPGTPQQNGVSERRNRTLLDMVRSMMSYAQLPSSFWGYAVEIAVYILNVVSSKSVSKTPFEL
KTIKT RSDRGGEY+ LKFQNYL+E I SQL APGTPQQNGVSERRNRTLLDMVRSMMSYA LP+SFWGYAV+ AVYILN V SKSVS+TP +L
Subjt: -----KTIKTLRSDRGGEYLGLKFQNYLIEHEISSQLLAPGTPQQNGVSERRNRTLLDMVRSMMSYAQLPSSFWGYAVEIAVYILNVVSSKSVSKTPFEL
Query: WRGRKASLPHFRIWGCPAHVLVANPKKLDSRSKLCLFVGYPKETRGGYFFDPQENKVFVSTNATFLEEDHVREHKPHSKMVLSGLSGEATNESTRVGPST
W GRK SL HFRIWGCPAHVL NPKKL+ RSKLCLFVGYPK TRGGYF+DP++NKVFVSTNATFLEEDH+REHKP SK+VL+ LS E T PST
Subjt: WRGRKASLPHFRIWGCPAHVLVANPKKLDSRSKLCLFVGYPKETRGGYFFDPQENKVFVSTNATFLEEDHVREHKPHSKMVLSGLSGEATNESTRVGPST
Query: RVVDEPSTQTGPSTRVVDEPSTSGQAQPSQQFRMPRRSGRVVTQPERYLSLAETPAVISDDGIEDPLTFRQAMNDVDHDEWVKAMDLEMESMYFNQV
RVV+EPS TRVV S++ QP Q R PRRSGRV P RY+SL ET VISD IEDPLTF++AM DVD DEW+KAM+LE+ESMYFN V
Subjt: RVVDEPSTQTGPSTRVVDEPSTSGQAQPSQQFRMPRRSGRVVTQPERYLSLAETPAVISDDGIEDPLTFRQAMNDVDHDEWVKAMDLEMESMYFNQV
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| SwissProt top hits | e value | %identity | Alignment |
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| P04146 Copia protein | 3.0e-24 | 35.87 | Show/hide |
Query: DRGGEYLGLKFQNYLIEHEISSQLLAPGTPQQNGVSERRNRTLLDMVRSMMSYAQLPSSFWGYAVEIAVYILNVVSSKSV---SKTPFELWRGRKASLPH
D G EYL + + + ++ IS L P TPQ NGVSER RT+ + R+M+S A+L SFWG AV A Y++N + S+++ SKTP+E+W +K L H
Subjt: DRGGEYLGLKFQNYLIEHEISSQLLAPGTPQQNGVSERRNRTLLDMVRSMMSYAQLPSSFWGYAVEIAVYILNVVSSKSV---SKTPFELWRGRKASLPH
Query: FRIWGCPAHVLVANPK-KLDSRSKLCLFVGYPKETRGGYFFDPQENKVFVSTNATFLEEDHVREHKPHSKMVLSGLSGEATNES
R++G +V + N + K D +S +FVGY E G +D K V+ + E + V + V S E+ N++
Subjt: FRIWGCPAHVLVANPK-KLDSRSKLCLFVGYPKETRGGYFFDPQENKVFVSTNATFLEEDHVREHKPHSKMVLSGLSGEATNES
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 9.0e-37 | 34.75 | Show/hide |
Query: GKTIKTLRSDRGGEYLGLKFQNYLIEHEISSQLLAPGTPQQNGVSERRNRTLLDMVRSMMSYAQLPSSFWGYAVEIAVYILNVVSSKSVS-KTPFELWRG
G+ +K LRSD GGEY +F+ Y H I + PGTPQ NGV+ER NRT+++ VRSM+ A+LP SFWG AV+ A Y++N S ++ + P +W
Subjt: GKTIKTLRSDRGGEYLGLKFQNYLIEHEISSQLLAPGTPQQNGVSERRNRTLLDMVRSMMSYAQLPSSFWGYAVEIAVYILNVVSSKSVS-KTPFELWRG
Query: RKASLPHFRIWGCP--AHVLVANPKKLDSRSKLCLFVGYPKETRGGYFFDPQENKVFVSTNATFLEEDHVREHKPHSKMVLSG-LSGEATNESTRVGPST
++ S H +++GC AHV KLD +S C+F+GY E G +DP + KV S + F E VR S+ V +G + T ST P++
Subjt: RKASLPHFRIWGCP--AHVLVANPKKLDSRSKLCLFVGYPKETRGGYFFDPQENKVFVSTNATFLEEDHVREHKPHSKMVLSG-LSGEATNESTRVGPST
Query: --RVVDEPSTQTGPSTRVVDE--------PSTSGQAQPSQQFRMPRRSGRVVTQPERYLSLAETPAVISDDGIEDPLTFRQAMNDVDHDEWVKAMDLEME
DE S Q V+++ Q +Q + RRS R + RY S +ISDD +P + ++ ++ + ++ +KAM EME
Subjt: --RVVDEPSTQTGPSTRVVDE--------PSTSGQAQPSQQFRMPRRSGRVVTQPERYLSLAETPAVISDDGIEDPLTFRQAMNDVDHDEWVKAMDLEME
Query: SMYFN
S+ N
Subjt: SMYFN
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| Q851Q6 Probable GTP-binding protein OBGC2 | 3.9e-08 | 42.86 | Show/hide |
Query: IDMPE-RRINIMSPTSNVMRDESDKVRVFGQLGEKVSLELILRVVADVGLV----AREGNKVSYVCCSSFSPLDVDKAT---HVGRGGGGAFGDGETGVS
ID+PE RR M + N+MRD SD+V + GQ GE+VSLELILRVVADVGLV A + +S + + D T ++GR G GD G
Subjt: IDMPE-RRINIMSPTSNVMRDESDKVRVFGQLGEKVSLELILRVVADVGLV----AREGNKVSYVCCSSFSPLDVDKAT---HVGRGGGGAFGDGETGVS
Query: HLLSAIVCTDLP
S DLP
Subjt: HLLSAIVCTDLP
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 2.9e-19 | 30.67 | Show/hide |
Query: IKTLRSDRGGEYLGLKFQNYLIEHEISSQLLAPGTPQQNGVSERRNRTLLDMVRSMMSYAQLPSSFWGYAVEIAVYILNVVSSKSVS-KTPFELWRGRKA
I T SD GGE++ L Y +H IS P TP+ NG+SER++R +++ +++S+A +P ++W YA +AVY++N + + + ++PF+ G
Subjt: IKTLRSDRGGEYLGLKFQNYLIEHEISSQLLAPGTPQQNGVSERRNRTLLDMVRSMMSYAQLPSSFWGYAVEIAVYILNVVSSKSVS-KTPFELWRGRKA
Query: SLPHFRIWGCPAHVLVA--NPKKLDSRSKLCLFVGYPKETRGGYFFDPQENKVFVSTNATFLE
+ R++GC + + N KLD +S+ C+F+GY Q +++++S + F E
Subjt: SLPHFRIWGCPAHVLVA--NPKKLDSRSKLCLFVGYPKETRGGYFFDPQENKVFVSTNATFLE
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 3.8e-19 | 35.29 | Show/hide |
Query: IKTLRSDRGGEYLGLKFQNYLIEHEISSQLLAPGTPQQNGVSERRNRTLLDMVRSMMSYAQLPSSFWGYAVEIAVYILNVVSSKSVS-KTPFELWRGRKA
I TL SD GGE++ L+ +YL +H IS P TP+ NG+SER++R +++M +++S+A +P ++W YA +AVY++N + + + ++PF+ G+
Subjt: IKTLRSDRGGEYLGLKFQNYLIEHEISSQLLAPGTPQQNGVSERRNRTLLDMVRSMMSYAQLPSSFWGYAVEIAVYILNVVSSKSVS-KTPFELWRGRKA
Query: SLPHFRIWGCPAHVLVA--NPKKLDSRSKLCLFVGY
+ +++GC + + N KL+ +SK C F+GY
Subjt: SLPHFRIWGCPAHVLVA--NPKKLDSRSKLCLFVGY
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