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Lag0018057 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0018057
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRNA-directed DNA polymerase (Reverse transcriptase), Ribonuclease H-like protein
Genome locationchr5:14932276..14933365
RNA-Seq ExpressionLag0018057
SyntenyLag0018057
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0033221.1 uncharacterized protein E6C27_scaffold845G00100 [Cucumis melo var. makuwa]8.3e-0550.94Show/hide
Query:  ALENSTEICLPLKFEVQSLIKARWQKADEAGEEQGINQNLLPNDENFAINWIE
        A+ +STE C PLK +VQSL+KA W +  + GEE  +NQN LPN E  +IN ++
Subjt:  ALENSTEICLPLKFEVQSLIKARWQKADEAGEEQGINQNLLPNDENFAINWIE

KAA0034830.1 Gag-pro-like protein [Cucumis melo var. makuwa]7.5e-0646.48Show/hide
Query:  VFSPYMEFDKEISDDSSRALENSTEICLPLKFEVQSLIKARWQKADEAGEEQGINQNLLPNDENFAINWIE
        VFSP +      S      + +STE C PL+ +VQSL+KARW K  + GEE  +NQN LPN+E  AIN ++
Subjt:  VFSPYMEFDKEISDDSSRALENSTEICLPLKFEVQSLIKARWQKADEAGEEQGINQNLLPNDENFAINWIE

KAA0046608.1 uncharacterized protein E6C27_scaffold114G001540 [Cucumis melo var. makuwa]8.3e-0550.94Show/hide
Query:  ALENSTEICLPLKFEVQSLIKARWQKADEAGEEQGINQNLLPNDENFAINWIE
        A+ +STE C PLK +VQSL+KA W +  + GEE  +NQN LPN E  +IN ++
Subjt:  ALENSTEICLPLKFEVQSLIKARWQKADEAGEEQGINQNLLPNDENFAINWIE

KAA0061241.1 uncharacterized protein E6C27_scaffold455G00760 [Cucumis melo var. makuwa]8.3e-0550.94Show/hide
Query:  ALENSTEICLPLKFEVQSLIKARWQKADEAGEEQGINQNLLPNDENFAINWIE
        A+ +STE C PLK +VQSL+KA W +  + GEE  +NQN LPN E  +IN ++
Subjt:  ALENSTEICLPLKFEVQSLIKARWQKADEAGEEQGINQNLLPNDENFAINWIE

TYK28914.1 Gag-pro-like protein [Cucumis melo var. makuwa]9.8e-0645.07Show/hide
Query:  VFSPYMEFDKEISDDSSRALENSTEICLPLKFEVQSLIKARWQKADEAGEEQGINQNLLPNDENFAINWIE
        VFSP +      S      + NSTE C PL+ +VQSL+KA+W K  + GEE  +NQN LPN+E   IN ++
Subjt:  VFSPYMEFDKEISDDSSRALENSTEICLPLKFEVQSLIKARWQKADEAGEEQGINQNLLPNDENFAINWIE

TrEMBL top hitse value%identityAlignment
A0A5A7SUT0 Reverse transcriptase4.0e-0550.94Show/hide
Query:  ALENSTEICLPLKFEVQSLIKARWQKADEAGEEQGINQNLLPNDENFAINWIE
        A+ +STE C PLK +VQSL+KA W +  + GEE  +NQN LPN E  +IN ++
Subjt:  ALENSTEICLPLKFEVQSLIKARWQKADEAGEEQGINQNLLPNDENFAINWIE

A0A5A7SV36 Gag-pro-like protein3.6e-0646.48Show/hide
Query:  VFSPYMEFDKEISDDSSRALENSTEICLPLKFEVQSLIKARWQKADEAGEEQGINQNLLPNDENFAINWIE
        VFSP +      S      + +STE C PL+ +VQSL+KARW K  + GEE  +NQN LPN+E  AIN ++
Subjt:  VFSPYMEFDKEISDDSSRALENSTEICLPLKFEVQSLIKARWQKADEAGEEQGINQNLLPNDENFAINWIE

A0A5A7TUT4 Uncharacterized protein4.0e-0550.94Show/hide
Query:  ALENSTEICLPLKFEVQSLIKARWQKADEAGEEQGINQNLLPNDENFAINWIE
        A+ +STE C PLK +VQSL+KA W +  + GEE  +NQN LPN E  +IN ++
Subjt:  ALENSTEICLPLKFEVQSLIKARWQKADEAGEEQGINQNLLPNDENFAINWIE

A0A5A7V681 Retrotrans_gag domain-containing protein4.0e-0550.94Show/hide
Query:  ALENSTEICLPLKFEVQSLIKARWQKADEAGEEQGINQNLLPNDENFAINWIE
        A+ +STE C PLK +VQSL+KA W +  + GEE  +NQN LPN E  +IN ++
Subjt:  ALENSTEICLPLKFEVQSLIKARWQKADEAGEEQGINQNLLPNDENFAINWIE

A0A5D3DZH7 Gag-pro-like protein4.7e-0645.07Show/hide
Query:  VFSPYMEFDKEISDDSSRALENSTEICLPLKFEVQSLIKARWQKADEAGEEQGINQNLLPNDENFAINWIE
        VFSP +      S      + NSTE C PL+ +VQSL+KA+W K  + GEE  +NQN LPN+E   IN ++
Subjt:  VFSPYMEFDKEISDDSSRALENSTEICLPLKFEVQSLIKARWQKADEAGEEQGINQNLLPNDENFAINWIE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACGTCGTACCTTGCATCATTTTCGACGCAAGCTCCTAATCAAGCCCTTTATCGAGGGAGTCATGTGGACGACTCAGTGTTCAGCCCATACATGGAGTTTGATAAGGA
AATTTCTGATGATTCAAGCAGGGCATTGGAAAACTCTACAGAGATTTGCCTCCCCCTGAAATTTGAGGTGCAAAGTTTAATCAAAGCCAGATGGCAGAAGGCTGATGAAG
CAGGAGAGGAGCAAGGTATCAATCAAAATCTTCTCCCGAATGATGAGAATTTTGCTATAAATTGGATTGAAGTGGATCATTGA
mRNA sequenceShow/hide mRNA sequence
ATGACGTCGTACCTTGCATCATTTTCGACGCAAGCTCCTAATCAAGCCCTTTATCGAGGGAGTCATGTGGACGACTCAGTGTTCAGCCCATACATGGAGTTTGATAAGGA
AATTTCTGATGATTCAAGCAGGGCATTGGAAAACTCTACAGAGATTTGCCTCCCCCTGAAATTTGAGGTGCAAAGTTTAATCAAAGCCAGATGGCAGAAGGCTGATGAAG
CAGGAGAGGAGCAAGGTATCAATCAAAATCTTCTCCCGAATGATGAGAATTTTGCTATAAATTGGATTGAAGTGGATCATTGA
Protein sequenceShow/hide protein sequence
MTSYLASFSTQAPNQALYRGSHVDDSVFSPYMEFDKEISDDSSRALENSTEICLPLKFEVQSLIKARWQKADEAGEEQGINQNLLPNDENFAINWIEVDH