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Lag0018060 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0018060
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRibonuclease H
Genome locationchr5:14971658..14971969
RNA-Seq ExpressionLag0018060
SyntenyLag0018060
Gene Ontology termsNA
InterPro domainsIPR021109 - Aspartic peptidase domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022146774.1 uncharacterized protein LOC111015901 [Momordica charantia]6.1e-2762Show/hide
Query:  HPHNDALVVTLTIANAKVHRILIDGGSSVDVLSTTAFNAMKLGSDRLRSSLTSLVGFGREKVNPRGSVELPVTFGEGLQIVTRMINFLVVDCVPAYNAIL
        HPHNDALV+TL IANAKVHRIL+DGGSS D+ S TA+ AM LG + L+SSLT L+GFG E++ P+G +ELP+TF    + +TRM++FLVVD   +YN IL
Subjt:  HPHNDALVVTLTIANAKVHRILIDGGSSVDVLSTTAFNAMKLGSDRLRSSLTSLVGFGREKVNPRGSVELPVTFGEGLQIVTRMINFLVVDCVPAYNAIL
XP_022154102.1 uncharacterized protein LOC111021438 [Momordica charantia]9.4e-2864Show/hide
Query:  HPHNDALVVTLTIANAKVHRILIDGGSSVDVLSTTAFNAMKLGSDRLRSSLTSLVGFGREKVNPRGSVELPVTFGEGLQIVTRMINFLVVDCVPAYNAIL
        HPHNDAL++TL IANAKVHRIL+DGGSS D +S TA+ AM LG + L+SSLT L+GFG E+V P G +ELPVTF  G + +T+M++FLVVD   +YNAIL
Subjt:  HPHNDALVVTLTIANAKVHRILIDGGSSVDVLSTTAFNAMKLGSDRLRSSLTSLVGFGREKVNPRGSVELPVTFGEGLQIVTRMINFLVVDCVPAYNAIL
XP_022155186.1 uncharacterized protein LOC111022321 [Momordica charantia]2.3e-2663.37Show/hide
Query:  HPHNDALVVTLTIANAKVHRILIDGGSSVDVLSTTAFNAMKLGSDRLRSSLTSLVGFGREKVNPRGSVELPVTFGEGLQIVTRMINFLVVDCVPAYNAIL
        HPHNDALV+TL IAN KVHRIL+DGGSS D++S TA+ AM LG   L+SS   LVGFG E+V   G +ELPVTFG G + VT+M++FLVV+   +YNAIL
Subjt:  HPHNDALVVTLTIANAKVHRILIDGGSSVDVLSTTAFNAMKLGSDRLRSSLTSLVGFGREKVNPRGSVELPVTFGEGLQIVTRMINFLVVDCVPAYNAIL

Query:  G
        G
Subjt:  G
XP_022155873.1 uncharacterized protein LOC111022886 [Momordica charantia]7.4e-2560.4Show/hide
Query:  HPHNDALVVTLTIANAKVHRILIDGGSSVDVLSTTAFNAMKLGSDRLRSSLTSLVGFGREKVNPRGSVELPVTFGEGLQIVTRMINFLVVDCVPAYNAIL
        HPHNDALV+TL IANAKVHRIL+DGGSS  ++S TA+ AM LG   L+SS   LVGFG E+V P G +ELPV FG G + + +M++FLVV    +YN IL
Subjt:  HPHNDALVVTLTIANAKVHRILIDGGSSVDVLSTTAFNAMKLGSDRLRSSLTSLVGFGREKVNPRGSVELPVTFGEGLQIVTRMINFLVVDCVPAYNAIL

Query:  G
        G
Subjt:  G
XP_022158687.1 uncharacterized protein LOC111025147 [Momordica charantia]1.4e-2662.38Show/hide
Query:  HPHNDALVVTLTIANAKVHRILIDGGSSVDVLSTTAFNAMKLGSDRLRSSLTSLVGFGREKVNPRGSVELPVTFGEGLQIVTRMINFLVVDCVPAYNAIL
        HPHNDALV+TL IAN KVHRIL+DGGSS D++S T +  M LG   L+SS   L+GFGRE+V P G +EL VTFG G + VT+M++FLVVD   +YNAIL
Subjt:  HPHNDALVVTLTIANAKVHRILIDGGSSVDVLSTTAFNAMKLGSDRLRSSLTSLVGFGREKVNPRGSVELPVTFGEGLQIVTRMINFLVVDCVPAYNAIL

Query:  G
        G
Subjt:  G
TrEMBL top hitse value%identityAlignment
A0A6J1CZ14 uncharacterized protein LOC1110159012.9e-2762Show/hide
Query:  HPHNDALVVTLTIANAKVHRILIDGGSSVDVLSTTAFNAMKLGSDRLRSSLTSLVGFGREKVNPRGSVELPVTFGEGLQIVTRMINFLVVDCVPAYNAIL
        HPHNDALV+TL IANAKVHRIL+DGGSS D+ S TA+ AM LG + L+SSLT L+GFG E++ P+G +ELP+TF    + +TRM++FLVVD   +YN IL
Subjt:  HPHNDALVVTLTIANAKVHRILIDGGSSVDVLSTTAFNAMKLGSDRLRSSLTSLVGFGREKVNPRGSVELPVTFGEGLQIVTRMINFLVVDCVPAYNAIL
A0A6J1DKR9 uncharacterized protein LOC1110214384.5e-2864Show/hide
Query:  HPHNDALVVTLTIANAKVHRILIDGGSSVDVLSTTAFNAMKLGSDRLRSSLTSLVGFGREKVNPRGSVELPVTFGEGLQIVTRMINFLVVDCVPAYNAIL
        HPHNDAL++TL IANAKVHRIL+DGGSS D +S TA+ AM LG + L+SSLT L+GFG E+V P G +ELPVTF  G + +T+M++FLVVD   +YNAIL
Subjt:  HPHNDALVVTLTIANAKVHRILIDGGSSVDVLSTTAFNAMKLGSDRLRSSLTSLVGFGREKVNPRGSVELPVTFGEGLQIVTRMINFLVVDCVPAYNAIL
A0A6J1DQY2 uncharacterized protein LOC1110223211.1e-2663.37Show/hide
Query:  HPHNDALVVTLTIANAKVHRILIDGGSSVDVLSTTAFNAMKLGSDRLRSSLTSLVGFGREKVNPRGSVELPVTFGEGLQIVTRMINFLVVDCVPAYNAIL
        HPHNDALV+TL IAN KVHRIL+DGGSS D++S TA+ AM LG   L+SS   LVGFG E+V   G +ELPVTFG G + VT+M++FLVV+   +YNAIL
Subjt:  HPHNDALVVTLTIANAKVHRILIDGGSSVDVLSTTAFNAMKLGSDRLRSSLTSLVGFGREKVNPRGSVELPVTFGEGLQIVTRMINFLVVDCVPAYNAIL

Query:  G
        G
Subjt:  G
A0A6J1DX76 uncharacterized protein LOC1110249243.6e-2559.41Show/hide
Query:  HPHNDALVVTLTIANAKVHRILIDGGSSVDVLSTTAFNAMKLGSDRLRSSLTSLVGFGREKVNPRGSVELPVTFGEGLQIVTRMINFLVVDCVPAYNAIL
        H HNDALV+TL IANAKVHRIL++ GSS D++S T + AM LG   L+SS   L+GFG E+V P G +ELPVTFG G + +T+M++FLVV+   +YNAIL
Subjt:  HPHNDALVVTLTIANAKVHRILIDGGSSVDVLSTTAFNAMKLGSDRLRSSLTSLVGFGREKVNPRGSVELPVTFGEGLQIVTRMINFLVVDCVPAYNAIL

Query:  G
        G
Subjt:  G
A0A6J1DXV4 uncharacterized protein LOC1110251476.6e-2762.38Show/hide
Query:  HPHNDALVVTLTIANAKVHRILIDGGSSVDVLSTTAFNAMKLGSDRLRSSLTSLVGFGREKVNPRGSVELPVTFGEGLQIVTRMINFLVVDCVPAYNAIL
        HPHNDALV+TL IAN KVHRIL+DGGSS D++S T +  M LG   L+SS   L+GFGRE+V P G +EL VTFG G + VT+M++FLVVD   +YNAIL
Subjt:  HPHNDALVVTLTIANAKVHRILIDGGSSVDVLSTTAFNAMKLGSDRLRSSLTSLVGFGREKVNPRGSVELPVTFGEGLQIVTRMINFLVVDCVPAYNAIL

Query:  G
        G
Subjt:  G
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCGTCATCCGCACAATGATGCGTTGGTGGTCACCCTAACGATTGCCAATGCAAAAGTTCACCGGATCCTCATTGATGGAGGGAGTTCTGTTGATGTACTCTCAACCAC
TGCGTTCAACGCCATGAAGCTGGGAAGCGATCGCTTGAGGTCGAGTCTCACGTCGCTGGTGGGGTTTGGCAGAGAAAAAGTAAACCCAAGAGGAAGCGTCGAACTGCCAG
TGACGTTTGGGGAAGGACTGCAAATAGTAACAAGAATGATCAACTTTCTAGTGGTAGACTGTGTCCCAGCATATAATGCCATCTTGGGATGA
mRNA sequenceShow/hide mRNA sequence
ATGCGTCATCCGCACAATGATGCGTTGGTGGTCACCCTAACGATTGCCAATGCAAAAGTTCACCGGATCCTCATTGATGGAGGGAGTTCTGTTGATGTACTCTCAACCAC
TGCGTTCAACGCCATGAAGCTGGGAAGCGATCGCTTGAGGTCGAGTCTCACGTCGCTGGTGGGGTTTGGCAGAGAAAAAGTAAACCCAAGAGGAAGCGTCGAACTGCCAG
TGACGTTTGGGGAAGGACTGCAAATAGTAACAAGAATGATCAACTTTCTAGTGGTAGACTGTGTCCCAGCATATAATGCCATCTTGGGATGA
Protein sequenceShow/hide protein sequence
MRHPHNDALVVTLTIANAKVHRILIDGGSSVDVLSTTAFNAMKLGSDRLRSSLTSLVGFGREKVNPRGSVELPVTFGEGLQIVTRMINFLVVDCVPAYNAILG