CuGenDBv2

Gene ID	Lag0018062
Organism	Luffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Description	CCHC-type domain-containing protein
Genome location	chr5:15000214..15000537
RNA-Seq Expression	Lag0018062
Synteny	Lag0018062
Gene Ontology terms	GO:0005488 - binding (molecular function)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0035755.1 uncharacterized protein E6C27_scaffold403G00270 [Cucumis melo var. makuwa]

2.6e-20

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Query:  HACLALCRRNLGLHSYCHEFFQTSNLVQLYSNDVHSIGSVKQFAISNVAEEDRILPPSTKRSAGRPKKKWILSRFERATSFKCGHCGQFGHNCRSCKNPI
        HAC+AL  RNL LH Y  +F+  SNL+ LY      IG+V Q   ++    D ILPP  KR AGRPKKK   S  E+  S +C  CG+ GHNCRSCK PI
Subjt:  HACLALCRRNLGLHSYCHEFFQTSNLVQLYSNDVHSIGSVKQFAISNVAEEDRILPPSTKRSAGRPKKKWILSRFERATSFKCGHCGQFGHNCRSCKNPI

TYK09853.1 uncharacterized protein E5676_scaffold39G00210 [Cucumis melo var. makuwa]

2.6e-20

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Query:  HACLALCRRNLGLHSYCHEFFQTSNLVQLYSNDVHSIGSVKQFAISNVAEEDRILPPSTKRSAGRPKKKWILSRFERATSFKCGHCGQFGHNCRSCKNPI
        HAC+AL  RNL LH Y  +F+  SNL+ LY      IG+V Q   ++    D ILPP  KR AGRPKKK   S  E+  S +C  CG+ GHNCRSCK PI
Subjt:  HACLALCRRNLGLHSYCHEFFQTSNLVQLYSNDVHSIGSVKQFAISNVAEEDRILPPSTKRSAGRPKKKWILSRFERATSFKCGHCGQFGHNCRSCKNPI

TYK22587.1 uncharacterized protein E5676_scaffold195G00040 [Cucumis melo var. makuwa]

4.4e-20

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Query:  HACLALCRRNLGLHSYCHEFFQTSNLVQLYSNDVHSIGSVKQFAISNVAEEDRILPPSTKRSAGRPKKKWILSRFERATSFKCGHCGQFGHNCRSCKNPI
        HAC AL  RNL LH Y  +F+  SNL+ LY     SIG+V Q   ++    D ILPP  KR AGRPKKK   S  E+  S +C  CG+ GHNC+SCK PI
Subjt:  HACLALCRRNLGLHSYCHEFFQTSNLVQLYSNDVHSIGSVKQFAISNVAEEDRILPPSTKRSAGRPKKKWILSRFERATSFKCGHCGQFGHNCRSCKNPI

XP_008442298.1 PREDICTED: uncharacterized protein LOC103486212 [Cucumis melo]

2.6e-20

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Query:  HACLALCRRNLGLHSYCHEFFQTSNLVQLYSNDVHSIGSVKQFAISNVAEEDRILPPSTKRSAGRPKKKWILSRFERATSFKCGHCGQFGHNCRSCKNPI
        HAC+AL  RNL LH Y  +F+  SNL+ LY      IG+V Q   ++    D ILPP  KR AGRPKKK   S  E+  S +C  CG+ GHNCRSCK PI
Subjt:  HACLALCRRNLGLHSYCHEFFQTSNLVQLYSNDVHSIGSVKQFAISNVAEEDRILPPSTKRSAGRPKKKWILSRFERATSFKCGHCGQFGHNCRSCKNPI

XP_008455803.1 PREDICTED: uncharacterized protein LOC103495899 [Cucumis melo]

4.4e-20

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Query:  HACLALCRRNLGLHSYCHEFFQTSNLVQLYSNDVHSIGSVKQFAISNVAEEDRILPPSTKRSAGRPKKKWILSRFERATSFKCGHCGQFGHNCRSCKNPI
        HAC AL  RNL LH Y  +F+  SNL+ LY     SIG+V Q   ++    D ILPP  KR AGRPKKK   S  E+  S +C  CG+ GHNC+SCK PI
Subjt:  HACLALCRRNLGLHSYCHEFFQTSNLVQLYSNDVHSIGSVKQFAISNVAEEDRILPPSTKRSAGRPKKKWILSRFERATSFKCGHCGQFGHNCRSCKNPI

TrEMBL top hits

e value

%identity

Alignment

A0A1S3B5C9 uncharacterized protein LOC103486212

1.2e-20

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Query:  HACLALCRRNLGLHSYCHEFFQTSNLVQLYSNDVHSIGSVKQFAISNVAEEDRILPPSTKRSAGRPKKKWILSRFERATSFKCGHCGQFGHNCRSCKNPI
        HAC+AL  RNL LH Y  +F+  SNL+ LY      IG+V Q   ++    D ILPP  KR AGRPKKK   S  E+  S +C  CG+ GHNCRSCK PI
Subjt:  HACLALCRRNLGLHSYCHEFFQTSNLVQLYSNDVHSIGSVKQFAISNVAEEDRILPPSTKRSAGRPKKKWILSRFERATSFKCGHCGQFGHNCRSCKNPI

A0A5A7SJA0 Uncharacterized protein

2.1e-20

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Query:  HACLALCRRNLGLHSYCHEFFQTSNLVQLYSNDVHSIGSVKQFAISNVAEEDRILPPSTKRSAGRPKKKWILSRFERATSFKCGHCGQFGHNCRSCKNPI
        HAC AL  RNL LH Y  +F+  SNL+ LY     SIG+V Q   ++    D ILPP  KR AGRPKKK   S  E+  S +C  CG+ GHNC+SCK PI
Subjt:  HACLALCRRNLGLHSYCHEFFQTSNLVQLYSNDVHSIGSVKQFAISNVAEEDRILPPSTKRSAGRPKKKWILSRFERATSFKCGHCGQFGHNCRSCKNPI

A0A5A7T2S1 Uncharacterized protein

1.2e-20

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Query:  HACLALCRRNLGLHSYCHEFFQTSNLVQLYSNDVHSIGSVKQFAISNVAEEDRILPPSTKRSAGRPKKKWILSRFERATSFKCGHCGQFGHNCRSCKNPI
        HAC+AL  RNL LH Y  +F+  SNL+ LY      IG+V Q   ++    D ILPP  KR AGRPKKK   S  E+  S +C  CG+ GHNCRSCK PI
Subjt:  HACLALCRRNLGLHSYCHEFFQTSNLVQLYSNDVHSIGSVKQFAISNVAEEDRILPPSTKRSAGRPKKKWILSRFERATSFKCGHCGQFGHNCRSCKNPI

A0A5D3CDB8 Uncharacterized protein

1.2e-20

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Query:  HACLALCRRNLGLHSYCHEFFQTSNLVQLYSNDVHSIGSVKQFAISNVAEEDRILPPSTKRSAGRPKKKWILSRFERATSFKCGHCGQFGHNCRSCKNPI
        HAC+AL  RNL LH Y  +F+  SNL+ LY      IG+V Q   ++    D ILPP  KR AGRPKKK   S  E+  S +C  CG+ GHNCRSCK PI
Subjt:  HACLALCRRNLGLHSYCHEFFQTSNLVQLYSNDVHSIGSVKQFAISNVAEEDRILPPSTKRSAGRPKKKWILSRFERATSFKCGHCGQFGHNCRSCKNPI

A0A5D3DFW1 Uncharacterized protein

2.1e-20

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Query:  HACLALCRRNLGLHSYCHEFFQTSNLVQLYSNDVHSIGSVKQFAISNVAEEDRILPPSTKRSAGRPKKKWILSRFERATSFKCGHCGQFGHNCRSCKNPI
        HAC AL  RNL LH Y  +F+  SNL+ LY     SIG+V Q   ++    D ILPP  KR AGRPKKK   S  E+  S +C  CG+ GHNC+SCK PI
Subjt:  HACLALCRRNLGLHSYCHEFFQTSNLVQLYSNDVHSIGSVKQFAISNVAEEDRILPPSTKRSAGRPKKKWILSRFERATSFKCGHCGQFGHNCRSCKNPI

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits	e value	%identity	Alignment
No hits found

Sequences

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CDS sequence

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ATGAACACCCCTATACATGCATGCCTCGCTTTGTGTCGTCGGAACCTTGGACTTCATTCATATTGTCATGAGTTTTTCCAAACATCCAATTTGGTGCAATTATACAGTAA
TGATGTACATTCAATTGGAAGTGTTAAACAATTTGCCATCTCAAATGTTGCTGAGGAGGATCGCATTCTCCCGCCAAGCACAAAGCGATCAGCTGGACGTCCGAAGAAAA
AATGGATTTTGTCTCGTTTTGAGAGGGCAACGTCCTTCAAGTGCGGGCACTGTGGTCAATTTGGTCACAACTGTAGATCATGCAAGAATCCGATTCTGAGATGA

mRNA sequence

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Protein sequence

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MNTPIHACLALCRRNLGLHSYCHEFFQTSNLVQLYSNDVHSIGSVKQFAISNVAEEDRILPPSTKRSAGRPKKKWILSRFERATSFKCGHCGQFGHNCRSCKNPILR

Lag0018062 (gene) of Sponge gourd (AG-4) v1 genome