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Lag0018065 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0018065
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr5:15081436..15081816
RNA-Seq ExpressionLag0018065
SyntenyLag0018065
Gene Ontology termsNA
InterPro domainsIPR036691 - Endonuclease/exonuclease/phosphatase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF8412704.1 hypothetical protein HHK36_000672 [Tetracentron sinense]4.4e-1946.09Show/hide
Query:  GYGEPRAVRALRHLVGSIKPQIVFIMEMKCDLQRSNRIMEELNFDHFKSVPSKGKSGGLILLWNSSTDVIINSTSDGHIDA-NIKGKSGGWRFTGFYGNP
        G G P AVR L  L+    P I+F+ME K D +R   I   L F H   +PS GKS GL L+W  + ++II + S  HIDA  I G++  WR TGFYGNP
Subjt:  GYGEPRAVRALRHLVGSIKPQIVFIMEMKCDLQRSNRIMEELNFDHFKSVPSKGKSGGLILLWNSSTDVIINSTSDGHIDA-NIKGKSGGWRFTGFYGNP

Query:  ETEKRHHSWKLMERL
        ++ KR  SW L++ L
Subjt:  ETEKRHHSWKLMERL

XP_022157437.1 uncharacterized protein LOC111024135 [Momordica charantia]1.8e-2555Show/hide
Query:  PGYGEPRAVRALRHLVGSIKPQIVFIMEMKCDLQRSNRIMEELNFDHFKSVPSKGKSGGLILLWNSSTDVIINSTSDGHIDANIKGKSGGWRFTGFYGNP
        PG G P   R LR+LV   +PQ+VF+ E K +     R   EL+FD   SV S GKSGGL+LLWNS ++V I S S GHID+ I  K G WRFTGFYGNP
Subjt:  PGYGEPRAVRALRHLVGSIKPQIVFIMEMKCDLQRSNRIMEELNFDHFKSVPSKGKSGGLILLWNSSTDVIINSTSDGHIDANIKGKSGGWRFTGFYGNP

Query:  ETEKRHHSWKLMERLKDIGD
         T KR  SWKL+ERL  + D
Subjt:  ETEKRHHSWKLMERLKDIGD

XP_030509188.1 uncharacterized protein LOC115723863 [Cannabis sativa]4.4e-1942.62Show/hide
Query:  GYGEPRAVRALRHLVGSIKPQIVFIMEMKCDLQRSNRIMEELNFDHFKSVPSKGKSGGLILLWNSSTDVIINSTSDGHIDANIKGKSG-GWRFTGFYGNP
        G G PRAVR LR L+    P ++FI+E K      ++I   L F H   VP +G  GGL+LLW S   V +N+ S  HID  ++   G  + FTGFYG+P
Subjt:  GYGEPRAVRALRHLVGSIKPQIVFIMEMKCDLQRSNRIMEELNFDHFKSVPSKGKSGGLILLWNSSTDVIINSTSDGHIDANIKGKSG-GWRFTGFYGNP

Query:  ETEKRHHSWKLMERLKDIGDAS
         T +RHH+W +++R  DI   S
Subjt:  ETEKRHHSWKLMERLKDIGDAS

XP_030970322.1 uncharacterized protein LOC115990651 [Quercus lobata]1.8e-2044.35Show/hide
Query:  GYGEPRAVRALRHLVGSIKPQIVFIMEMKCDLQRSNRIMEELNFDHFKSVPSKGKSGGLILLWNSSTDVIINSTSDGHIDANIKGKSG-GWRFTGFYGNP
        G G PRAV  L HLVG   P+IVF+ME K  ++    I E+L +    +VPS G+SGGL ++W    D+ + ++S  HIDA +   +G  WR TGFYG P
Subjt:  GYGEPRAVRALRHLVGSIKPQIVFIMEMKCDLQRSNRIMEELNFDHFKSVPSKGKSGGLILLWNSSTDVIINSTSDGHIDANIKGKSG-GWRFTGFYGNP

Query:  ETEKRHHSWKLMERL
        E  +RH +W L+  L
Subjt:  ETEKRHHSWKLMERL

XP_030970584.1 uncharacterized protein LOC115990959 [Quercus lobata]4.4e-1947.01Show/hide
Query:  GYGEPRAVRALRHLVGSIKPQIVFIMEMKCDLQRSNRIMEELNFDHFKSVPSKGKSGGLILLWNSSTDVIINSTSDGHIDANIKGKSGG--WRFTGFYGN
        G G PR+VRAL +LV    P++VF+ E K   +R  RI E + F +   VP  G+SGGL LLW   TD+ I S S+ HIDA I  ++    WRFTGFYG+
Subjt:  GYGEPRAVRALRHLVGSIKPQIVFIMEMKCDLQRSNRIMEELNFDHFKSVPSKGKSGGLILLWNSSTDVIINSTSDGHIDANIKGKSGG--WRFTGFYGN

Query:  PETEKRHHSWKLMERLK
        P+T  R  SW L++ L+
Subjt:  PETEKRHHSWKLMERLK

TrEMBL top hitse value%identityAlignment
A0A2N9G1F9 Uncharacterized protein7.8e-2245.76Show/hide
Query:  GYGEPRAVRALRHLVGSIKPQIVFIMEMKCDLQRSNRIMEELNFDHFKSVPSKGKSGGLILLWNSSTDVIINSTSDGHIDANIKGKSGG-WRFTGFYGNP
        G G P AVRAL H+V    P+++F+ME K D  R   I  +L FD+  +VPS G+SGGL LLW +  +V+I + S  HIDA++  K    WR TGFYG P
Subjt:  GYGEPRAVRALRHLVGSIKPQIVFIMEMKCDLQRSNRIMEELNFDHFKSVPSKGKSGGLILLWNSSTDVIINSTSDGHIDANIKGKSGG-WRFTGFYGNP

Query:  ETEKRHHSWKLMERLKDI
        E  +R  SW L++ L  +
Subjt:  ETEKRHHSWKLMERLKDI

A0A2N9G1M2 Uncharacterized protein2.0e-2245.9Show/hide
Query:  LERPGYGEPRAVRALRHLVGSIKPQIVFIMEMKCDLQRSNRIMEELNFDHFKSVPSKGKSGGLILLWNSSTDVIINSTSDGHIDANIKGKSGG-WRFTGF
        LE  G G P AVRAL H+V    P+++F+ME K D  R   I  +L FD+  +VPS G+SGGL LLW +  +V+I + S  HIDA++  K    WR TGF
Subjt:  LERPGYGEPRAVRALRHLVGSIKPQIVFIMEMKCDLQRSNRIMEELNFDHFKSVPSKGKSGGLILLWNSSTDVIINSTSDGHIDANIKGKSGG-WRFTGF

Query:  YGNPETEKRHHSWKLMERLKDI
        YG PE  +R  SW L++ L  +
Subjt:  YGNPETEKRHHSWKLMERLKDI

A0A2N9HS57 Reverse transcriptase domain-containing protein1.0e-2147.83Show/hide
Query:  GYGEPRAVRALRHLVGSIKPQIVFIMEMKCDLQRSNRIMEELNFDHFKSVPSKGKSGGLILLWNSSTDVIINSTSDGHIDANIKGKSGG-WRFTGFYGNP
        G G P AVRAL H+V    P+++F+ME K D  R   I  +L FD+  +VPS G+SGGL LLW    DV+I + S  HIDA++  K    WR TGFYG P
Subjt:  GYGEPRAVRALRHLVGSIKPQIVFIMEMKCDLQRSNRIMEELNFDHFKSVPSKGKSGGLILLWNSSTDVIINSTSDGHIDANIKGKSGG-WRFTGFYGNP

Query:  ETEKRHHSWKLMERL
        E  +R  SW L++ L
Subjt:  ETEKRHHSWKLMERL

A0A2N9I611 Uncharacterized protein9.2e-2349.57Show/hide
Query:  GYGEPRAVRALRHLVGSIKPQIVFIMEMKCDLQRSNRIMEELNFDHFKSVPSKGKSGGLILLWNSSTDVIINSTSDGHIDANIKGKSGGWRFTGFYGNPE
        G G PRAVR LR L     P+++F+ E K +++    I   L +D    VPSKG+SGGL LLW+   D+ I S +  HIDA IK + G WRFTGFYG+PE
Subjt:  GYGEPRAVRALRHLVGSIKPQIVFIMEMKCDLQRSNRIMEELNFDHFKSVPSKGKSGGLILLWNSSTDVIINSTSDGHIDANIKGKSGGWRFTGFYGNPE

Query:  TEKRHHSWKLMERLKDI
        T KR  SW L++ LK+I
Subjt:  TEKRHHSWKLMERLKDI

A0A6J1DUG8 uncharacterized protein LOC1110241358.9e-2655Show/hide
Query:  PGYGEPRAVRALRHLVGSIKPQIVFIMEMKCDLQRSNRIMEELNFDHFKSVPSKGKSGGLILLWNSSTDVIINSTSDGHIDANIKGKSGGWRFTGFYGNP
        PG G P   R LR+LV   +PQ+VF+ E K +     R   EL+FD   SV S GKSGGL+LLWNS ++V I S S GHID+ I  K G WRFTGFYGNP
Subjt:  PGYGEPRAVRALRHLVGSIKPQIVFIMEMKCDLQRSNRIMEELNFDHFKSVPSKGKSGGLILLWNSSTDVIINSTSDGHIDANIKGKSGGWRFTGFYGNP

Query:  ETEKRHHSWKLMERLKDIGD
         T KR  SWKL+ERL  + D
Subjt:  ETEKRHHSWKLMERLKDIGD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGGAACGCCCGGGGTATGGAGAACCCCGAGCAGTCCGAGCCCTTCGCCACTTAGTGGGAAGCATAAAACCCCAAATTGTTTTCATCATGGAAATGAAATGTGATCT
TCAACGAAGCAATAGAATTATGGAAGAGCTGAATTTCGATCATTTTAAAAGTGTCCCTAGCAAAGGGAAAAGTGGAGGTCTGATACTGTTATGGAATTCGAGTACTGATG
TCATAATAAACTCTACTTCTGATGGCCATATTGATGCCAATATCAAGGGTAAGTCGGGTGGGTGGAGATTCACAGGATTTTATGGGAATCCTGAAACGGAAAAGAGACAC
CACTCTTGGAAGCTTATGGAAAGGCTTAAGGACATTGGTGATGCCAGCTAA
mRNA sequenceShow/hide mRNA sequence
ATGTTGGAACGCCCGGGGTATGGAGAACCCCGAGCAGTCCGAGCCCTTCGCCACTTAGTGGGAAGCATAAAACCCCAAATTGTTTTCATCATGGAAATGAAATGTGATCT
TCAACGAAGCAATAGAATTATGGAAGAGCTGAATTTCGATCATTTTAAAAGTGTCCCTAGCAAAGGGAAAAGTGGAGGTCTGATACTGTTATGGAATTCGAGTACTGATG
TCATAATAAACTCTACTTCTGATGGCCATATTGATGCCAATATCAAGGGTAAGTCGGGTGGGTGGAGATTCACAGGATTTTATGGGAATCCTGAAACGGAAAAGAGACAC
CACTCTTGGAAGCTTATGGAAAGGCTTAAGGACATTGGTGATGCCAGCTAA
Protein sequenceShow/hide protein sequence
MLERPGYGEPRAVRALRHLVGSIKPQIVFIMEMKCDLQRSNRIMEELNFDHFKSVPSKGKSGGLILLWNSSTDVIINSTSDGHIDANIKGKSGGWRFTGFYGNPETEKRH
HSWKLMERLKDIGDAS