; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0018069 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0018069
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionGag/pol protein
Genome locationchr5:15288714..15295738
RNA-Seq ExpressionLag0018069
SyntenyLag0018069
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025945.1 gag/pol protein [Cucumis melo var. makuwa]1.5e-3090.91Show/hide
Query:  MNLPITLYCDNSGAVANSKEPRSHKRGKHIRRKYHLIQEIVQRGDVVVTKIASEHNIADLFTKALSAKEFEGHLESL
        MNLPITLYCDNSGAVANSKEPRSHKRGKHI RKYHLI+EIVQRGDV+VTKIASEHNIAD FTK L+AK FEGHLESL
Subjt:  MNLPITLYCDNSGAVANSKEPRSHKRGKHIRRKYHLIQEIVQRGDVVVTKIASEHNIADLFTKALSAKEFEGHLESL

KAA0034955.1 gag/pol protein [Cucumis melo var. makuwa]1.3e-3261.9Show/hide
Query:  MNLPITLYCDNSGAVANSKEPRSHKRGKHIRRKYHLIQEIVQRGDVVVTKIASEHNIADLFTKALSAKEFEGHLESLDYAAERLEGANSMLQQNWEQNCH
        MNLP+TLYCDNSGA+ANSKEPRSHKRGKHI RKYH+I+EIVQRGD +VTKIASEHNIAD FTK L+   FEGHLESL             L+  + ++C 
Subjt:  MNLPITLYCDNSGAVANSKEPRSHKRGKHIRRKYHLIQEIVQRGDVVVTKIASEHNIADLFTKALSAKEFEGHLESLDYAAERLEGANSMLQQNWEQNCH

Query:  II-ARESGLFADSISLPFWGQDRVGS
        +I   ESG  ADSI L FW +   G+
Subjt:  II-ARESGLFADSISLPFWGQDRVGS

KAA0035907.1 gag/pol protein [Cucumis melo var. makuwa]1.5e-3090.91Show/hide
Query:  MNLPITLYCDNSGAVANSKEPRSHKRGKHIRRKYHLIQEIVQRGDVVVTKIASEHNIADLFTKALSAKEFEGHLESL
        MNLPITLYCDNSGAVANSKEPRSHKRGKHI RKYHLI+EIVQRGDV+VTKIASEHNIAD FTK L+AK FEGHLESL
Subjt:  MNLPITLYCDNSGAVANSKEPRSHKRGKHIRRKYHLIQEIVQRGDVVVTKIASEHNIADLFTKALSAKEFEGHLESL

KAA0042496.1 gag/pol protein [Cucumis melo var. makuwa]1.5e-3090.91Show/hide
Query:  MNLPITLYCDNSGAVANSKEPRSHKRGKHIRRKYHLIQEIVQRGDVVVTKIASEHNIADLFTKALSAKEFEGHLESL
        MNLPITLYCDNSGAVANSKEPRSHKRGKHI RKYHLI+EIVQRGDV+VTKIASEHNIAD FTK L+AK FEGHLESL
Subjt:  MNLPITLYCDNSGAVANSKEPRSHKRGKHIRRKYHLIQEIVQRGDVVVTKIASEHNIADLFTKALSAKEFEGHLESL

TYK05792.1 gag/pol protein [Cucumis melo var. makuwa]1.5e-4167.38Show/hide
Query:  MNLPITLYCDNSGAVANSKEPRSHKRGKHIRRKYHLIQEIVQRGDVVVTKIASEHNIADLFTKALSAKEFEGHLESLDYAAERLEGANSMLQQNWEQNCH
        MNLPITLYCDNSGAVA+SKEPRSHKRGKHI RKYHLI+EIVQRGDV+VTKIA EHNIA+ FTK L AK FEGH ESL        G   M  ++    C 
Subjt:  MNLPITLYCDNSGAVANSKEPRSHKRGKHIRRKYHLIQEIVQRGDVVVTKIASEHNIADLFTKALSAKEFEGHLESLDYAAERLEGANSMLQQNWEQNCH

Query:  IIARESGLFADSISLPFWGQDRVGSWEHSLTRRNSILPNFR
            ESG   DSI L FWGQDRVGSWEH+ TR NS +P FR
Subjt:  IIARESGLFADSISLPFWGQDRVGSWEHSLTRRNSILPNFR

TrEMBL top hitse value%identityAlignment
A0A5A7T0G5 Gag/pol protein6.1e-3361.9Show/hide
Query:  MNLPITLYCDNSGAVANSKEPRSHKRGKHIRRKYHLIQEIVQRGDVVVTKIASEHNIADLFTKALSAKEFEGHLESLDYAAERLEGANSMLQQNWEQNCH
        MNLP+TLYCDNSGA+ANSKEPRSHKRGKHI RKYH+I+EIVQRGD +VTKIASEHNIAD FTK L+   FEGHLESL             L+  + ++C 
Subjt:  MNLPITLYCDNSGAVANSKEPRSHKRGKHIRRKYHLIQEIVQRGDVVVTKIASEHNIADLFTKALSAKEFEGHLESLDYAAERLEGANSMLQQNWEQNCH

Query:  II-ARESGLFADSISLPFWGQDRVGS
        +I   ESG  ADSI L FW +   G+
Subjt:  II-ARESGLFADSISLPFWGQDRVGS

A0A5A7T2V9 Gag/pol protein7.4e-3190.91Show/hide
Query:  MNLPITLYCDNSGAVANSKEPRSHKRGKHIRRKYHLIQEIVQRGDVVVTKIASEHNIADLFTKALSAKEFEGHLESL
        MNLPITLYCDNSGAVANSKEPRSHKRGKHI RKYHLI+EIVQRGDV+VTKIASEHNIAD FTK L+AK FEGHLESL
Subjt:  MNLPITLYCDNSGAVANSKEPRSHKRGKHIRRKYHLIQEIVQRGDVVVTKIASEHNIADLFTKALSAKEFEGHLESL

A0A5A7TZD0 Gag/pol protein7.4e-3190.91Show/hide
Query:  MNLPITLYCDNSGAVANSKEPRSHKRGKHIRRKYHLIQEIVQRGDVVVTKIASEHNIADLFTKALSAKEFEGHLESL
        MNLPITLYCDNSGAVANSKEPRSHKRGKHI RKYHLI+EIVQRGDV+VTKIASEHNIAD FTK L+AK FEGHLESL
Subjt:  MNLPITLYCDNSGAVANSKEPRSHKRGKHIRRKYHLIQEIVQRGDVVVTKIASEHNIADLFTKALSAKEFEGHLESL

A0A5A7UYE8 Gag/pol protein7.4e-3190.91Show/hide
Query:  MNLPITLYCDNSGAVANSKEPRSHKRGKHIRRKYHLIQEIVQRGDVVVTKIASEHNIADLFTKALSAKEFEGHLESL
        MNLPITLYCDNSGAVANSKEPRSHKRGKHI RKYHLI+EIVQRGDV+VTKIASEHNIAD FTK L+AK FEGHLESL
Subjt:  MNLPITLYCDNSGAVANSKEPRSHKRGKHIRRKYHLIQEIVQRGDVVVTKIASEHNIADLFTKALSAKEFEGHLESL

A0A5D3C3J6 Gag/pol protein7.2e-4267.38Show/hide
Query:  MNLPITLYCDNSGAVANSKEPRSHKRGKHIRRKYHLIQEIVQRGDVVVTKIASEHNIADLFTKALSAKEFEGHLESLDYAAERLEGANSMLQQNWEQNCH
        MNLPITLYCDNSGAVA+SKEPRSHKRGKHI RKYHLI+EIVQRGDV+VTKIA EHNIA+ FTK L AK FEGH ESL        G   M  ++    C 
Subjt:  MNLPITLYCDNSGAVANSKEPRSHKRGKHIRRKYHLIQEIVQRGDVVVTKIASEHNIADLFTKALSAKEFEGHLESLDYAAERLEGANSMLQQNWEQNCH

Query:  IIARESGLFADSISLPFWGQDRVGSWEHSLTRRNSILPNFR
            ESG   DSI L FWGQDRVGSWEH+ TR NS +P FR
Subjt:  IIARESGLFADSISLPFWGQDRVGSWEHSLTRRNSILPNFR

SwissProt top hitse value%identityAlignment
P04146 Copia protein1.7e-0843.28Show/hide
Query:  PITLYCDNSGAVANSKEPRSHKRGKHIRRKYHLIQEIVQRGDVVVTKIASEHNIADLFTKALSAKEF
        PI +Y DN G ++ +  P  HKR KHI  KYH  +E VQ   + +  I +E+ +AD+FTK L A  F
Subjt:  PITLYCDNSGAVANSKEPRSHKRGKHIRRKYHLIQEIVQRGDVVVTKIASEHNIADLFTKALSAKEF

P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-946.1e-0640Show/hide
Query:  LYCDNSGAVANSKEPRSHKRGKHIRRKYHLIQEIVQRGDVVVTKIASEHNIADLFTKALSAKEFE
        +YCD+  A+  SK    H R KHI  +YH I+E+V    + V KI++  N AD+ TK +   +FE
Subjt:  LYCDNSGAVANSKEPRSHKRGKHIRRKYHLIQEIVQRGDVVVTKIASEHNIADLFTKALSAKEFE

Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAACTTGCCCATTACGTTATACTGTGACAACAGTGGGGCTGTAGCCAATTCAAAGGAACCTCGTAGCCACAAACGAGGTAAACACATAAGGAGGAAGTATCATCTGAT
TCAAGAGATTGTGCAAAGAGGAGATGTGGTCGTGACCAAGATCGCTTCAGAGCACAACATTGCTGATCTGTTTACGAAGGCCCTCTCGGCTAAAGAGTTCGAGGGTCATC
TAGAAAGTCTAGATTATGCTGCTGAGCGACTGGAGGGAGCAAATTCTATGTTGCAGCAAAACTGGGAACAGAACTGCCACATCATAGCTCGTGAGAGTGGCCTGTTCGCC
GACTCAATAAGCCTACCATTTTGGGGACAAGACCGAGTGGGAAGTTGGGAACATAGTCTTACAAGACGGAATTCAATTCTTCCCAACTTCAGGGTTGTTCATAAGAGGAG
CACTGGTCCATTTGATCCCACCGGTAGCTCACTAAGGGCGTTGAGAATACAGAGACCAAAAAGAAAATTCCCTAGTTTTTCCCTTGCTCCCACAAGCAATCAGCGCAATG
TTCCTTGTGAGAATGATGGTGAAGATTTTGTGGTTGTGTCCTCAAAACCCAACAAAATCAAACCTTGGAGGGTTGAGTTAAAGGTGGTGATTATTTGTGCAATGCTGAAA
GAACTGTTTTATGGCAGCAATGCGTGGTTTTGCAGGATGCTCAGGCAAGCGTTGAGACGTCAGCCCTTGAGCGTCTCGACGCTGGCATTCCATATCAGAATAGGCGCGAA
ATCGTTGCAGCGTCTCGACGCTGCAGCTAAAACAGAGGATTTGAAGGCTGAAGCAAAGGGAGAAATTGGAAATCAACCCATTGTTCGTGGGGATCATGAAGGGGACGTCG
GTCTCGGCCTACATTGA
mRNA sequenceShow/hide mRNA sequence
ATGAACTTGCCCATTACGTTATACTGTGACAACAGTGGGGCTGTAGCCAATTCAAAGGAACCTCGTAGCCACAAACGAGGTAAACACATAAGGAGGAAGTATCATCTGAT
TCAAGAGATTGTGCAAAGAGGAGATGTGGTCGTGACCAAGATCGCTTCAGAGCACAACATTGCTGATCTGTTTACGAAGGCCCTCTCGGCTAAAGAGTTCGAGGGTCATC
TAGAAAGTCTAGATTATGCTGCTGAGCGACTGGAGGGAGCAAATTCTATGTTGCAGCAAAACTGGGAACAGAACTGCCACATCATAGCTCGTGAGAGTGGCCTGTTCGCC
GACTCAATAAGCCTACCATTTTGGGGACAAGACCGAGTGGGAAGTTGGGAACATAGTCTTACAAGACGGAATTCAATTCTTCCCAACTTCAGGGTTGTTCATAAGAGGAG
CACTGGTCCATTTGATCCCACCGGTAGCTCACTAAGGGCGTTGAGAATACAGAGACCAAAAAGAAAATTCCCTAGTTTTTCCCTTGCTCCCACAAGCAATCAGCGCAATG
TTCCTTGTGAGAATGATGGTGAAGATTTTGTGGTTGTGTCCTCAAAACCCAACAAAATCAAACCTTGGAGGGTTGAGTTAAAGGTGGTGATTATTTGTGCAATGCTGAAA
GAACTGTTTTATGGCAGCAATGCGTGGTTTTGCAGGATGCTCAGGCAAGCGTTGAGACGTCAGCCCTTGAGCGTCTCGACGCTGGCATTCCATATCAGAATAGGCGCGAA
ATCGTTGCAGCGTCTCGACGCTGCAGCTAAAACAGAGGATTTGAAGGCTGAAGCAAAGGGAGAAATTGGAAATCAACCCATTGTTCGTGGGGATCATGAAGGGGACGTCG
GTCTCGGCCTACATTGA
Protein sequenceShow/hide protein sequence
MNLPITLYCDNSGAVANSKEPRSHKRGKHIRRKYHLIQEIVQRGDVVVTKIASEHNIADLFTKALSAKEFEGHLESLDYAAERLEGANSMLQQNWEQNCHIIARESGLFA
DSISLPFWGQDRVGSWEHSLTRRNSILPNFRVVHKRSTGPFDPTGSSLRALRIQRPKRKFPSFSLAPTSNQRNVPCENDGEDFVVVSSKPNKIKPWRVELKVVIICAMLK
ELFYGSNAWFCRMLRQALRRQPLSVSTLAFHIRIGAKSLQRLDAAAKTEDLKAEAKGEIGNQPIVRGDHEGDVGLGLH