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Lag0018074 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0018074
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRibonuclease H
Genome locationchr5:15471773..15472579
RNA-Seq ExpressionLag0018074
SyntenyLag0018074
Gene Ontology termsGO:0090304 - nucleic acid metabolic process (biological process)
GO:0110165 - cellular anatomical structure (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0003824 - catalytic activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GFY86848.1 hypothetical protein Acr_05g0004870 [Actinidia rufa]8.1e-1655.84Show/hide
Query:  MKLNFDLLEERRETTRLWVAEYENKIVKYYNATLKKCSFREGDLVLRKVMQNTKDPNVGVLGPAWEGSYRVSRIVRP
        +KLN DLL+E+RE+T L  A Y+N+I KYYN  +K  SF  GDLVLR+V  +T+DP+ G LGP WEG Y+V ++ RP
Subjt:  MKLNFDLLEERRETTRLWVAEYENKIVKYYNATLKKCSFREGDLVLRKVMQNTKDPNVGVLGPAWEGSYRVSRIVRP

XP_022155342.1 uncharacterized protein LOC111022476 [Momordica charantia]9.5e-1757.89Show/hide
Query:  MKLNFDLLEERRETTRLWVAEYENKIVKYYNATLKKCSFREGDLVLRKVMQNTKDPNVGVLGPAWEGSYRVSRIVR
        +KLN +LLEE RET RL  AEY+N+I ++YN+ +KK  F+EGDLVLRK+M NTKD      GP WEG Y+V+++VR
Subjt:  MKLNFDLLEERRETTRLWVAEYENKIVKYYNATLKKCSFREGDLVLRKVMQNTKDPNVGVLGPAWEGSYRVSRIVR

XP_022156561.1 uncharacterized protein LOC111023436 [Momordica charantia]3.3e-1757.89Show/hide
Query:  MKLNFDLLEERRETTRLWVAEYENKIVKYYNATLKKCSFREGDLVLRKVMQNTKDPNVGVLGPAWEGSYRVSRIVR
        ++L+ DLLEE RET RL  AEY+N+I +YYN+ +KK  F+EGDLVLRK+M NTKD   G   P WEG Y+V+++VR
Subjt:  MKLNFDLLEERRETTRLWVAEYENKIVKYYNATLKKCSFREGDLVLRKVMQNTKDPNVGVLGPAWEGSYRVSRIVR

XP_022158579.1 uncharacterized protein LOC111025033 [Momordica charantia]3.5e-1963.16Show/hide
Query:  MKLNFDLLEERRETTRLWVAEYENKIVKYYNATLKKCSFREGDLVLRKVMQNTKDPNVGVLGPAWEGSYRVSRIVR
        +KLN DLLEE RET RL  AEY+N+I +YYN+ +KK  F+EGDLVLRKVM NTKD   G LGP WEG Y+ +++VR
Subjt:  MKLNFDLLEERRETTRLWVAEYENKIVKYYNATLKKCSFREGDLVLRKVMQNTKDPNVGVLGPAWEGSYRVSRIVR

XP_030486931.1 uncharacterized protein LOC115703840 [Cannabis sativa]1.4e-1552.56Show/hide
Query:  MMKLNFDLLEERRETTRLWVAEYENKIVKYYNATLKKCSFREGDLVLRKVMQNTKDPNVGVLGPAWEGSYRVSRIVRP
        MM  + DLLE RRE +++ +A Y+ K+ +Y+N+ +K+ SF+ GDLVLR+V+ NTKDP  GVLGP WEG Y V+ +V P
Subjt:  MMKLNFDLLEERRETTRLWVAEYENKIVKYYNATLKKCSFREGDLVLRKVMQNTKDPNVGVLGPAWEGSYRVSRIVRP

TrEMBL top hitse value%identityAlignment
A0A6J1DP30 uncharacterized protein LOC1110224764.6e-1757.89Show/hide
Query:  MKLNFDLLEERRETTRLWVAEYENKIVKYYNATLKKCSFREGDLVLRKVMQNTKDPNVGVLGPAWEGSYRVSRIVR
        +KLN +LLEE RET RL  AEY+N+I ++YN+ +KK  F+EGDLVLRK+M NTKD      GP WEG Y+V+++VR
Subjt:  MKLNFDLLEERRETTRLWVAEYENKIVKYYNATLKKCSFREGDLVLRKVMQNTKDPNVGVLGPAWEGSYRVSRIVR

A0A6J1DVB6 uncharacterized protein LOC1110234361.6e-1757.89Show/hide
Query:  MKLNFDLLEERRETTRLWVAEYENKIVKYYNATLKKCSFREGDLVLRKVMQNTKDPNVGVLGPAWEGSYRVSRIVR
        ++L+ DLLEE RET RL  AEY+N+I +YYN+ +KK  F+EGDLVLRK+M NTKD   G   P WEG Y+V+++VR
Subjt:  MKLNFDLLEERRETTRLWVAEYENKIVKYYNATLKKCSFREGDLVLRKVMQNTKDPNVGVLGPAWEGSYRVSRIVR

A0A6J1DZU0 Ribonuclease H1.7e-1963.16Show/hide
Query:  MKLNFDLLEERRETTRLWVAEYENKIVKYYNATLKKCSFREGDLVLRKVMQNTKDPNVGVLGPAWEGSYRVSRIVR
        +KLN DLLEE RET RL  AEY+N+I +YYN+ +KK  F+EGDLVLRKVM NTKD   G LGP WEG Y+ +++VR
Subjt:  MKLNFDLLEERRETTRLWVAEYENKIVKYYNATLKKCSFREGDLVLRKVMQNTKDPNVGVLGPAWEGSYRVSRIVR

A0A7J0EGU8 Ribonuclease H1.9e-1555.84Show/hide
Query:  MKLNFDLLEERRETTRLWVAEYENKIVKYYNATLKKCSFREGDLVLRKVMQNTKDPNVGVLGPAWEGSYRVSRIVRP
        ++LN DLLEERRE   L  A Y+ ++VKYYN  +K  SF  GDLVLR+V  +TK+PN G LGP WEG Y+V ++ RP
Subjt:  MKLNFDLLEERRETTRLWVAEYENKIVKYYNATLKKCSFREGDLVLRKVMQNTKDPNVGVLGPAWEGSYRVSRIVRP

A0A7J0EK62 Ribonuclease H3.9e-1655.84Show/hide
Query:  MKLNFDLLEERRETTRLWVAEYENKIVKYYNATLKKCSFREGDLVLRKVMQNTKDPNVGVLGPAWEGSYRVSRIVRP
        +KLN DLL+E+RE+T L  A Y+N+I KYYN  +K  SF  GDLVLR+V  +T+DP+ G LGP WEG Y+V ++ RP
Subjt:  MKLNFDLLEERRETTRLWVAEYENKIVKYYNATLKKCSFREGDLVLRKVMQNTKDPNVGVLGPAWEGSYRVSRIVRP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGAAATTAAATTTTGATCTGTTAGAAGAACGTCGAGAGACAACACGACTTTGGGTTGCAGAGTACGAGAACAAAATTGTAAAGTACTATAATGCAACATTGAAGAA
ATGTAGTTTTAGAGAGGGGGACCTCGTGTTGAGAAAGGTTATGCAGAATACCAAAGATCCCAATGTGGGCGTGCTAGGACCAGCTTGGGAAGGGTCCTATCGGGTCAGTA
GAATAGTTCGGCCAGTAGCTTCACACAAAGATGGGGTCTACTGCCCCACTGCAGGAGGAAGGAGGTCGACCAGGTCGAGGCTCGTAGAGTGGAAATCCCAATACTCTTTG
AGGCAATCGACAGACAAAATGTTCTTGGTAGAGTGGAAACCCCAATACCCTCCAAAGACAATCGACAGACAAAATGTCCTTGGTAGAGTGGAAACCCCAATACTCTCCAA
GACAATCAACAGGAAAAATGTCATTGGTAGAGTGGAAATTCCAATACTCCAAGGCAATCAACAGGCAAAATGTCCTTAG
mRNA sequenceShow/hide mRNA sequence
ATGATGAAATTAAATTTTGATCTGTTAGAAGAACGTCGAGAGACAACACGACTTTGGGTTGCAGAGTACGAGAACAAAATTGTAAAGTACTATAATGCAACATTGAAGAA
ATGTAGTTTTAGAGAGGGGGACCTCGTGTTGAGAAAGGTTATGCAGAATACCAAAGATCCCAATGTGGGCGTGCTAGGACCAGCTTGGGAAGGGTCCTATCGGGTCAGTA
GAATAGTTCGGCCAGTAGCTTCACACAAAGATGGGGTCTACTGCCCCACTGCAGGAGGAAGGAGGTCGACCAGGTCGAGGCTCGTAGAGTGGAAATCCCAATACTCTTTG
AGGCAATCGACAGACAAAATGTTCTTGGTAGAGTGGAAACCCCAATACCCTCCAAAGACAATCGACAGACAAAATGTCCTTGGTAGAGTGGAAACCCCAATACTCTCCAA
GACAATCAACAGGAAAAATGTCATTGGTAGAGTGGAAATTCCAATACTCCAAGGCAATCAACAGGCAAAATGTCCTTAG
Protein sequenceShow/hide protein sequence
MMKLNFDLLEERRETTRLWVAEYENKIVKYYNATLKKCSFREGDLVLRKVMQNTKDPNVGVLGPAWEGSYRVSRIVRPVASHKDGVYCPTAGGRRSTRSRLVEWKSQYSL
RQSTDKMFLVEWKPQYPPKTIDRQNVLGRVETPILSKTINRKNVIGRVEIPILQGNQQAKCP