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Lag0018081 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0018081
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRT_RNaseH_2 domain-containing protein
Genome locationchr5:15715088..15716296
RNA-Seq ExpressionLag0018081
SyntenyLag0018081
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8695166.1 hypothetical protein F3Y22_tig00110733pilonHSYRG00282 [Hibiscus syriacus]5.9e-0934.69Show/hide
Query:  FINELAREKYREMLKRDFLFERGFGDDLPHFLRVG------IANHNWSKFCAKPDPVNSNIVREFYANVDNVEEFQAIVRGVTVDWSPGAIDSLFNLQ
        F++E A+E Y+ +  R   FE GF         +G      +  H W KF   P PVN+ IV+EFY+N+    +   +VRG+++ ++P AI+  F LQ
Subjt:  FINELAREKYREMLKRDFLFERGFGDDLPHFLRVG------IANHNWSKFCAKPDPVNSNIVREFYANVDNVEEFQAIVRGVTVDWSPGAIDSLFNLQ

PON42276.1 hypothetical protein PanWU01x14_283280 [Parasponia andersonii]7.8e-0935.48Show/hide
Query:  IRFINELAREKYREMLK-RDFLFERGF-GD-----DLPHFLRVGIANHNWSKFCAKPDPVNSNIVREFYANVDNVEEFQAIVRGVTVDWSPGAIDSLFNL
        ++  +E A  +Y E ++ R    E+GF GD     + P F+   I  HNW  FCA P+ + + +VREFYAN+ N ++    VRGV V  S  AI++++ L
Subjt:  IRFINELAREKYREMLK-RDFLFERGF-GD-----DLPHFLRVGIANHNWSKFCAKPDPVNSNIVREFYANVDNVEEFQAIVRGVTVDWSPGAIDSLFNL

Query:  QDFPHVGFNEMVVAPSSDQLNAVV
         D P    +E V A +  +L  V+
Subjt:  QDFPHVGFNEMVVAPSSDQLNAVV

PON46472.1 hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii]2.3e-0839.81Show/hide
Query:  IRFINELAREKYREMLK-RDFLFERGFGDD-------LPHFLRVGIANHNWSKFCAKPDPVNSNIVREFYANVDNVEEFQAIVRGVTVDWSPGAIDSLFN
        ++F  E A  +Y   ++ R    E+GF  D       LP   +V I  HNW +FCA P+     +VREFYAN+ + EE    VRGV V WS  AI+++F 
Subjt:  IRFINELAREKYREMLK-RDFLFERGFGDD-------LPHFLRVGIANHNWSKFCAKPDPVNSNIVREFYANVDNVEEFQAIVRGVTVDWSPGAIDSLFN

Query:  LQD
        L D
Subjt:  LQD

PON65868.1 hypothetical protein PanWU01x14_113570 [Parasponia andersonii]2.3e-0836.29Show/hide
Query:  IRFINELAREKYREMLK-RDFLFERGF-GD-----DLPHFLRVGIANHNWSKFCAKPDPVNSNIVREFYANVDNVEEFQAIVRGVTVDWSPGAIDSLFNL
        ++F +E A  +Y E ++ R    E+GF GD     + P F+   I  HNW  FCA P+     +VREFYAN+ N ++    VRGV V  S  AI++++ L
Subjt:  IRFINELAREKYREMLK-RDFLFERGF-GD-----DLPHFLRVGIANHNWSKFCAKPDPVNSNIVREFYANVDNVEEFQAIVRGVTVDWSPGAIDSLFNL

Query:  QDFPHVGFNEMVVAPSSDQLNAVV
         D P    +E V A +  +L  V+
Subjt:  QDFPHVGFNEMVVAPSSDQLNAVV

RYE21173.1 hypothetical protein EOP45_09925 [Sphingobacteriaceae bacterium]1.0e-0832.86Show/hide
Query:  FINELAREKYREMLKRDFLFERGF--GDDLPHFLRVG--IANHNWSKFCAKPD-PVNSNIVREFYANVDNVEEFQAIVRGVTVDWSPGAIDSLFNLQD--
        F ++ A E+Y  +++R  +FERG       P   ++   I   +W KFCA P+   N  ++ EFYAN+ + E+    VRGV VD S GAI++L    D  
Subjt:  FINELAREKYREMLKRDFLFERGF--GDDLPHFLRVG--IANHNWSKFCAKPD-PVNSNIVREFYANVDNVEEFQAIVRGVTVDWSPGAIDSLFNLQD--

Query:  FPHVGFNEMVVAPSSDQLNAVVREECPWSRGRNF-LDKGI
        F + G+ + +  P+ D++ +V+      + G N+ +DKG+
Subjt:  FPHVGFNEMVVAPSSDQLNAVVREECPWSRGRNF-LDKGI

TrEMBL top hitse value%identityAlignment
A0A2P5B0K0 Uncharacterized protein3.8e-0935.48Show/hide
Query:  IRFINELAREKYREMLK-RDFLFERGF-GD-----DLPHFLRVGIANHNWSKFCAKPDPVNSNIVREFYANVDNVEEFQAIVRGVTVDWSPGAIDSLFNL
        ++  +E A  +Y E ++ R    E+GF GD     + P F+   I  HNW  FCA P+ + + +VREFYAN+ N ++    VRGV V  S  AI++++ L
Subjt:  IRFINELAREKYREMLK-RDFLFERGF-GD-----DLPHFLRVGIANHNWSKFCAKPDPVNSNIVREFYANVDNVEEFQAIVRGVTVDWSPGAIDSLFNL

Query:  QDFPHVGFNEMVVAPSSDQLNAVV
         D P    +E V A +  +L  V+
Subjt:  QDFPHVGFNEMVVAPSSDQLNAVV

A0A2P5BCG4 Uncharacterized protein (Fragment)1.1e-0839.81Show/hide
Query:  IRFINELAREKYREMLK-RDFLFERGFGDD-------LPHFLRVGIANHNWSKFCAKPDPVNSNIVREFYANVDNVEEFQAIVRGVTVDWSPGAIDSLFN
        ++F  E A  +Y   ++ R    E+GF  D       LP   +V I  HNW +FCA P+     +VREFYAN+ + EE    VRGV V WS  AI+++F 
Subjt:  IRFINELAREKYREMLK-RDFLFERGFGDD-------LPHFLRVGIANHNWSKFCAKPDPVNSNIVREFYANVDNVEEFQAIVRGVTVDWSPGAIDSLFN

Query:  LQD
        L D
Subjt:  LQD

A0A2P5CXV1 Uncharacterized protein1.1e-0836.29Show/hide
Query:  IRFINELAREKYREMLK-RDFLFERGF-GD-----DLPHFLRVGIANHNWSKFCAKPDPVNSNIVREFYANVDNVEEFQAIVRGVTVDWSPGAIDSLFNL
        ++F +E A  +Y E ++ R    E+GF GD     + P F+   I  HNW  FCA P+     +VREFYAN+ N ++    VRGV V  S  AI++++ L
Subjt:  IRFINELAREKYREMLK-RDFLFERGF-GD-----DLPHFLRVGIANHNWSKFCAKPDPVNSNIVREFYANVDNVEEFQAIVRGVTVDWSPGAIDSLFNL

Query:  QDFPHVGFNEMVVAPSSDQLNAVV
         D P    +E V A +  +L  V+
Subjt:  QDFPHVGFNEMVVAPSSDQLNAVV

A0A4Q3ENY7 Uncharacterized protein4.9e-0932.86Show/hide
Query:  FINELAREKYREMLKRDFLFERGF--GDDLPHFLRVG--IANHNWSKFCAKPD-PVNSNIVREFYANVDNVEEFQAIVRGVTVDWSPGAIDSLFNLQD--
        F ++ A E+Y  +++R  +FERG       P   ++   I   +W KFCA P+   N  ++ EFYAN+ + E+    VRGV VD S GAI++L    D  
Subjt:  FINELAREKYREMLKRDFLFERGF--GDDLPHFLRVG--IANHNWSKFCAKPD-PVNSNIVREFYANVDNVEEFQAIVRGVTVDWSPGAIDSLFNLQD--

Query:  FPHVGFNEMVVAPSSDQLNAVVREECPWSRGRNF-LDKGI
        F + G+ + +  P+ D++ +V+      + G N+ +DKG+
Subjt:  FPHVGFNEMVVAPSSDQLNAVVREECPWSRGRNF-LDKGI

A0A6A2ZUE4 Uncharacterized protein2.9e-0934.69Show/hide
Query:  FINELAREKYREMLKRDFLFERGFGDDLPHFLRVG------IANHNWSKFCAKPDPVNSNIVREFYANVDNVEEFQAIVRGVTVDWSPGAIDSLFNLQ
        F++E A+E Y+ +  R   FE GF         +G      +  H W KF   P PVN+ IV+EFY+N+    +   +VRG+++ ++P AI+  F LQ
Subjt:  FINELAREKYREMLKRDFLFERGFGDDLPHFLRVG------IANHNWSKFCAKPDPVNSNIVREFYANVDNVEEFQAIVRGVTVDWSPGAIDSLFNLQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCGCAAGAAGGACGAAAGAGGATGTTCAGGAAACAGAGAGAGAGAGGTAGCAGGAAAGAAAGCTGCGGAAGAAACTTTGACAATACATCAAGAAGATAGAGGCAAAGG
AATTGCTGAAGCATCGGATGAACCTATAGAAGAAGCAGGAGAAGGACCATTCATCCGCTTCATCAATGAACTTGCCCGAGAAAAATATCGGGAGATGCTAAAAAGGGATT
TCTTATTCGAAAGAGGGTTTGGTGACGATCTGCCACATTTCTTAAGGGTAGGGATCGCGAATCACAATTGGAGTAAATTCTGTGCGAAACCAGACCCAGTGAATTCGAAC
ATTGTTCGAGAGTTTTATGCGAATGTTGATAATGTAGAGGAATTTCAGGCCATAGTCCGAGGAGTGACTGTTGACTGGAGCCCAGGGGCGATCGATTCATTATTCAACCT
TCAGGACTTCCCACACGTAGGCTTCAATGAGATGGTGGTGGCACCATCGAGCGATCAATTGAATGCGGTAGTCCGAGAGGAGTGCCCATGGTCCAGAGGACGTAATTTTC
TTGACAAGGGAATCATAGATATGCCTAATCTGGCGCGGCTTCAGCGAACGCAAGAGGCACGCCAAGGTGGGCTTGTGTGTGGAATTCATCAAATCCTAGAGCAGCTGGCA
CTGTCGGCCAGTAGGCAAGAGTTTGCTGAAGCAAGCTCAAACCTATTGGACCTACGCTAA
mRNA sequenceShow/hide mRNA sequence
ATGCGCAAGAAGGACGAAAGAGGATGTTCAGGAAACAGAGAGAGAGAGGTAGCAGGAAAGAAAGCTGCGGAAGAAACTTTGACAATACATCAAGAAGATAGAGGCAAAGG
AATTGCTGAAGCATCGGATGAACCTATAGAAGAAGCAGGAGAAGGACCATTCATCCGCTTCATCAATGAACTTGCCCGAGAAAAATATCGGGAGATGCTAAAAAGGGATT
TCTTATTCGAAAGAGGGTTTGGTGACGATCTGCCACATTTCTTAAGGGTAGGGATCGCGAATCACAATTGGAGTAAATTCTGTGCGAAACCAGACCCAGTGAATTCGAAC
ATTGTTCGAGAGTTTTATGCGAATGTTGATAATGTAGAGGAATTTCAGGCCATAGTCCGAGGAGTGACTGTTGACTGGAGCCCAGGGGCGATCGATTCATTATTCAACCT
TCAGGACTTCCCACACGTAGGCTTCAATGAGATGGTGGTGGCACCATCGAGCGATCAATTGAATGCGGTAGTCCGAGAGGAGTGCCCATGGTCCAGAGGACGTAATTTTC
TTGACAAGGGAATCATAGATATGCCTAATCTGGCGCGGCTTCAGCGAACGCAAGAGGCACGCCAAGGTGGGCTTGTGTGTGGAATTCATCAAATCCTAGAGCAGCTGGCA
CTGTCGGCCAGTAGGCAAGAGTTTGCTGAAGCAAGCTCAAACCTATTGGACCTACGCTAA
Protein sequenceShow/hide protein sequence
MRKKDERGCSGNREREVAGKKAAEETLTIHQEDRGKGIAEASDEPIEEAGEGPFIRFINELAREKYREMLKRDFLFERGFGDDLPHFLRVGIANHNWSKFCAKPDPVNSN
IVREFYANVDNVEEFQAIVRGVTVDWSPGAIDSLFNLQDFPHVGFNEMVVAPSSDQLNAVVREECPWSRGRNFLDKGIIDMPNLARLQRTQEARQGGLVCGIHQILEQLA
LSASRQEFAEASSNLLDLR